prot_Ecto-sp13_S_contig1432.3347.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1432.3347.1
Unique Nameprot_Ecto-sp13_S_contig1432.3347.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length643
Homology
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: D7FNG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG6_ECTSI)

HSP 1 Score: 1171 bits (3030), Expect = 0.000e+0
Identity = 607/643 (94.40%), Postives = 615/643 (95.65%), Query Frame = 0
Query:    1 MLDEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGGANPGPSSMATPEDEEACRLDFDPKASXXXXXXXXQRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSLAAADRFGPGTGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMSTLMASDPRECNALAEAYTYCLAADGLSLGGNNLLSLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLGLVGPSATTAVAGRGR-RAAALPRATVCLEAVVNLLQSPVVVEQEPRLTEKCSHLVYKLCSSKDTRVSALNRLRHSSGGSSNAAFFPQALRVALGDSGRSMMMMPPPEAKAEASFGRHCLAWLLKAASIDLRTSCEVQQRARPVAGPPANAP 642
            MLDEGVRRSLTNSG+SFRVLT LTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQ LVPTGTGRQEG IVGG MAKNA+SSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPY LGEKTRYR ASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGG A+PGPSSMATPEDEEACRLDFDPKAS        QRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSL  ADRFG   GGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMM+TLMASDPRECNALAEAYT CLAADGL LGGNNL SLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLGLVGPSATTAVAGRGR  AAALPRA+VCLEAVV+LLQSPVVVEQEPRL EKCSHL+YKLCSSKDTRVSALNRLRH SGGSSNAAFFPQALRVAL DSGRSMMMMPPPEAKAEASFGRHCLAWLLKAA+IDLRTSCEVQQRARPVAGPPANAP
Sbjct:    1 MLDEGVRRSLTNSGNSFRVLTTLTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQ-LVPTGTGRQEGVIVGGGMAKNANSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYTLGEKTRYRGASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGSADPGPSSMATPEDEEACRLDFDPKASSSSS----QRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSLTPADRFGAAAGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMATLMASDPRECNALAEAYTCCLAADGLGLGGNNLPSLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLGLVGPSATTAVAGRGRGAAAALPRASVCLEAVVSLLQSPVVVEQEPRLAEKCSHLLYKLCSSKDTRVSALNRLRHPSGGSSNAAFFPQALRVALADSGRSMMMMPPPEAKAEASFGRHCLAWLLKAAAIDLRTSCEVQQRARPVAGPPANAP 638          
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A6H5L6F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F6_9PHAE)

HSP 1 Score: 610 bits (1572), Expect = 1.600e-212
Identity = 336/460 (73.04%), Postives = 343/460 (74.57%), Query Frame = 0
Query:   83 MAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGGANPGPSSMATPEDEEACRLDFDPKASXXXXXXXXQRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSLAAADRFG--PGTGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRER----------------------------------------------------------------------------YIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMSTLMASDPRECNALAEAYTYCLAADGLSLGGNNLLSLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGAL 464
            M +NA S S SQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYR ASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPL GEGGG NPGPSSMATPEDEEACRLDFDP+A         Q R     +    E    GGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLML GGRK+EADGGSLA+ADRFG   G G GLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRER                                                                            YIEYDGNMVIPLLSTSVLLSCGRNLPAGNMM+TLMASDPRECNALAEAYTYCLAADGLSLGGNNL SLE MLCPPN EADGDFMTLD ALIGAGTG RNWGGDEGA+
Sbjct:    1 MVRNALSPSASQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRGASGIQPYVAYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLAGEGGGVNPGPSSMATPEDEEACRLDFDPRAPSSSSSSS-QVRLTVMSFSAALE----GGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLLGGRKNEADGGSLASADRFGVGAGAGSGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERCVLLSLSMLEAASEREKAFVDQWRARVSAGGLDDYDEDGGRGGXXXXXXXXXGTLAPPAYLGNLLSEQNTIAVVARYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMATLMASDPRECNALAEAYTYCLAADGLSLGGNNLPSLEEMLCPPNREADGDFMTLDTALIGAGTGERNWGGDEGAV 455          
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: UPI001C728B15 (nuclear pore complex protein Nup205 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C728B15)

HSP 1 Score: 96.3 bits (238), Expect = 9.300e-17
Identity = 59/189 (31.22%), Postives = 96/189 (50.79%), Query Frame = 0
Query:    2 LDEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRY 188
            LDE  R +L+ +      +  L  L+TC V  SLK ++   +AA A  P+ +  IW  +E AQ ++PT                   S +   P G+  E+E+VE+R   YPVT G   L+  L+ H  P NLG  TR+    GI+PY+ ++L CVL+      + + GE+W++ A   +++  +++ Y
Sbjct:  604 LDEIARITLSENTHYVPTVVIL-GLITCSVPASLKAALLNCMAAFATSPDISLNIWQGLEMAQ-VIPT-----------------VKSVAVYHPSGILMELEEVETRMEEYPVTRGMLTLLDSLLNHPFPNNLGHATRH---PGIEPYLEFVLDCVLLKCNSRAYKNPGEKWKIMALCYKILEKVMKSY 770          
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A6P8H800_ACTTE (nuclear pore complex protein Nup205-like n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H800_ACTTE)

HSP 1 Score: 94.0 bits (232), Expect = 4.940e-16
Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 0
Query:    3 DEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRY 188
            DE  R +L  S  ++  + +L  L++C +   LKG I   LAA AK PE A  +W+ +E +Q LV   T +Q G                +Q RG+  E+ ++E+R  TYPVT  F  LI+EL    +P  LG   R     G +PY+AYL   V +      + D+ E+W VA  V++V+  LL  Y
Sbjct:  608 DETARITLCES-QTWLPVASLFGLLSCTIDIRLKGCILNTLAAFAKSPEIASSMWLTLELSQILV---TVKQPG--------------QTTQDRGIQVELNEIEARSETYPVTRAFLRLIRELTDIPIPATLGAGYR---VPGFEPYLAYLRDDVFLKFNSRGYQDSKEKWEVACGVVEVLFKLLDDY 774          
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: UPI001F0382E8 (nuclear pore complex protein Nup205-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0382E8)

HSP 1 Score: 92.8 bits (229), Expect = 1.130e-15
Identity = 64/197 (32.49%), Postives = 95/197 (48.22%), Query Frame = 0
Query:    2 LDEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLV---PTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRYPLTGE 193
            +DE  R +L  +  S+  LT++  L+ C +  SLK  I + LAA A   ET   +W  +E +Q L    P G   QE G                    L AE+E++ESR  TYP T  F  L+  L  + +P NLG   R     G +PY+ +L   VL+      + D  E+W+VA+ VLQ+ + LL ++  + E
Sbjct:  600 MDETARIALCEN-PSWVPLTSMFGLLGCSIPTSLKACILETLAAFAMSQETTASMWQSLETSQILQTVKPAGQALQESG--------------------LLAELEEIESRNETYPETRAFMTLLANLTAYPVPANLGAGYR---VPGFEPYLEFLRDSVLLKFKARAYLDPNEKWQVASGVLQIFVKLLEQFEPSAE 772          
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: W5JBM6_ANODA (Nuclear pore complex protein Nup205 n=2 Tax=Nyssorhynchus TaxID=44543 RepID=W5JBM6_ANODA)

HSP 1 Score: 92.0 bits (227), Expect = 1.970e-15
Identity = 57/173 (32.95%), Postives = 90/173 (52.02%), Query Frame = 0
Query:   20 LTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQL--VPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIPEL--RFADAGERWRVAARVLQVMLTLLRRY 188
            L+ L  L++C V   LK  I + LAA A + E A ++W  +E+ Q +  VPT                    +SN Q RG+ +E+E+VESR   YP+T+     +  L++  +P NLGE  R   A GI PY++Y++  VL+      + D  E+W++  + LQ++   LR Y
Sbjct:  655 LSVLVGLISCSVPIQLKAEIVRTLAALANNFENALQLWSNLEDVQIISTVPT--------------------TSNFQTRGVRSELEEVESRNEAYPLTQAMLDFLAVLMRTTVPENLGEGKR---APGIAPYLSYVIDVVLLQVFSRNYKDPAEKWQLTQKCLQILHCFLRDY 804          
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A182V211_ANOME (Uncharacterized protein n=16 Tax=Cellia TaxID=44534 RepID=A0A182V211_ANOME)

HSP 1 Score: 90.9 bits (224), Expect = 4.510e-15
Identity = 57/181 (31.49%), Postives = 95/181 (52.49%), Query Frame = 0
Query:    3 DEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVM 181
            DE  R +L  S D +  L  L  L++C V   LK  I + LA+ A   E A ++W  +E++Q                  +     S+SN + RG+ +E+E+VESR  T+P+T+    L+  L+   +P +LGE +R   A GI PY++Y++  VL+      + D  E+W++A + LQ++
Sbjct:  604 DELSRIALCES-DKWAPLNVLVGLISCSVPIQLKAEIVRTLASLAGSLENAIKLWHNLEDSQ------------------IVNTIPSTSNFKTRGVISELEEVESRNETFPLTQAMLDLLSSLMSTAIPDDLGEGSR---APGIHPYLSYVVNTVLLRLFSRNYKDGAEKWQLAQKCLQIV 762          
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A210R3N4_MIZYE (Nucleoporin 205 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210R3N4_MIZYE)

HSP 1 Score: 89.4 bits (220), Expect = 1.350e-14
Identity = 135/553 (24.41%), Postives = 216/553 (39.06%), Query Frame = 0
Query:   26 LVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGGANPGPSSMATPEDEEACRLDFDPKASXXXXXXXXQRRYKSPGYYILREILGQGGLFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEADGGSLAAADRFGPGTGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPDWSWWRERYIEYDGNMVIPL---LSTSVLLSCGRNLPAGNMMSTLMASDPR-ECNA-LAEAYTYCLAADGLSLGGNNLLSLEGMLCPPNGEADGDFMTLDAALIGAGTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLG--LVGPSATTAVAGRGRRAA---ALPRATVCLEAVVNLLQSPVVVEQEPRLTEKCSHLVYKLCSSKDTRVSALNRLRHS 566
            LVTC +   LK  +++ LAA A+ P+ A  +W  +E   Q++PT            + +K A         G+  E++++ESR   YP+ +GF  LI  L    +P  LG   R   A G  PY+ +L   V +      + + GE+W +AA VL ++  LLR + +                PED     ++     +            KS G+ +L  +L      R ++++L       D  +  L+          AL +   L   R  E    +L  AD+F       +   ++ G A+    + +  L  +      PD      +YI +     +P     + +VL    R  P    +  L  +D +  CN  L   +  CL  D       N +                 + LD A +     G           + R  +L ++L  ++Q  PNLAHLLLG  L  P + T +  +G   +    L      LE  V     P  + + P+L E C  L++KLCS+KDT    L  LR S
Sbjct:  624 LVTCSIPSPLKAELFRTLAAFARSPDIAASLWQTLE-VSQILPT------------IQSKGAG--------GIQVELDEIESRNEEYPMIQGFLALIDTLTDIPVPAGLGAGLR---APGFDPYLLFLRDSVFLRFNSRAYKNPGEKWEIAASVLNILSKLLREHEIV---------------PEDFVDELIEVQSGGTVVAN--------KSAGHTLLVYMLNDSSFLRMILRIL-------DDVINQLET--YTDIPGKALMERTALLCLRMIEY---TLEKADQF-------VSACRETG-ASIMVVSMDRLLLGINPRTGKPDHLVNIAKYITF--GTFLPYHAQAAMTVLYRVCRTAPIQTKLLNLFTADQKTSCNLDLLHGFVECLEVDEAEEVVQNRV-----------------VQLDEAAVEVNVLGN-------VRNSTRQNLLRIILHCLDQPSPNLAHLLLGFDLQKPVSKTNLQDQGILGSPKTCLHAILSILEQGVGSSVGPSCLHETPQLAELCYKLIFKLCSNKDTSAPTLRYLRTS 1083          
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: A0A182S6P3_9DIPT (Uncharacterized protein n=1 Tax=Anopheles maculatus TaxID=74869 RepID=A0A182S6P3_9DIPT)

HSP 1 Score: 88.6 bits (218), Expect = 1.980e-14
Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = 0
Query:    3 DEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLLRRY 188
            DE  R +L  S D +  L  L  L++C V   LK  I + LA  A   E A ++W  +E++Q +                      S+SN + RG+ +E+E+VESR   +P+T+    L+  L+   +P +LGE +R   A GI PY++Y++  VL+      + D  E+W++A + LQ++   +  +
Sbjct:   90 DEMSRIALCES-DKWAPLNVLVGLISCSVPIQLKAEIVRTLATLAGSLENAIKLWHNLEDSQII------------------NTVPSTSNFKTRGVISELEEVESRNELFPLTQAMLDLLAALMSTAIPDDLGEGSR---APGIHPYLSYVVNTVLLRLFSRNYKDGAEKWQLAQKCLQIVYMFVNSF 255          
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Match: UPI000A2A5FF9 (LOW QUALITY PROTEIN: nuclear pore complex protein Nup205-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5FF9)

HSP 1 Score: 87.8 bits (216), Expect = 4.060e-14
Identity = 62/185 (33.51%), Postives = 93/185 (50.27%), Query Frame = 0
Query:    3 DEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDPETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFAEMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYVAYLLKCVLIP--ELRFADAGERWRVAARVLQVMLTLL 185
            DE  R +L  S  ++  + +L  L++C +   LKGSI   LAA AK PE A  +W  +E +Q LV   T +Q G                 Q RG+  E+ ++ESR  + PVT  F  L+++L    +P +LG   R     G +PY+ YLL  V +      + D  E+W+V+ +VL+V   LL
Sbjct:  607 DETARIALXES-QAWLPIASLFGLLSCPIDIRLKGSILDTLAAFAKSPEIAASLWHTLELSQILV---TVQQPGQAA--------------QDRGIQVELNEIESRSESXPVTRSFLGLLKDLTDIPIPXSLGAGYR---TPGFEPYLMYLLNEVFLKFNSRGYQDVEEKWQVSCQVLEVFFKLL 770          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1432.3347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG6_ECTSI0.000e+094.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6F6_9PHAE1.600e-21273.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001C728B159.300e-1731.22nuclear pore complex protein Nup205 n=1 Tax=Parast... [more]
A0A6P8H800_ACTTE4.940e-1634.57nuclear pore complex protein Nup205-like n=2 Tax=A... [more]
UPI001F0382E81.130e-1532.49nuclear pore complex protein Nup205-like n=1 Tax=X... [more]
W5JBM6_ANODA1.970e-1532.95Nuclear pore complex protein Nup205 n=2 Tax=Nyssor... [more]
A0A182V211_ANOME4.510e-1531.49Uncharacterized protein n=16 Tax=Cellia TaxID=4453... [more]
A0A210R3N4_MIZYE1.350e-1424.41Nucleoporin 205 n=2 Tax=Pectinidae TaxID=6566 RepI... [more]
A0A182S6P3_9DIPT1.980e-1429.79Uncharacterized protein n=1 Tax=Anopheles maculatu... [more]
UPI000A2A5FF94.060e-1433.51LOW QUALITY PROTEIN: nuclear pore complex protein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021827Nucleoporin Nup186/Nup192/Nup205PFAMPF11894Nup192coord: 13..188
e-value: 2.5E-26
score: 91.3
coord: 466..570
e-value: 2.6E-10
score: 38.2
IPR021827Nucleoporin Nup186/Nup192/Nup205PANTHERPTHR31344:SF0NUCLEAR PORE COMPLEX PROTEIN NUP205coord: 467..630
IPR021827Nucleoporin Nup186/Nup192/Nup205PANTHERPTHR31344:SF0NUCLEAR PORE COMPLEX PROTEIN NUP205coord: 21..275
NoneNo IPR availablePANTHERPTHR31344FAMILY NOT NAMEDcoord: 21..275
NoneNo IPR availablePANTHERPTHR31344FAMILY NOT NAMEDcoord: 467..630

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1432contigEcto-sp13_S_contig1432:2947..13283 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1432.3347.1mRNA_Ecto-sp13_S_contig1432.3347.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1432 2947..13283 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1432.3347.1 ID=prot_Ecto-sp13_S_contig1432.3347.1|Name=mRNA_Ecto-sp13_S_contig1432.3347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=643bp
MLDEGVRRSLTNSGDSFRVLTALTNLVTCGVRPSLKGSIYKALAACAKDP
ETARRIWIFIEEAQQLVPTGTGRQEGGIVGGVMAKNASSSSNSQPRGLFA
EMEQVESRERTYPVTEGFCCLIQELVQHDLPYNLGEKTRYRAASGIQPYV
AYLLKCVLIPELRFADAGERWRVAARVLQVMLTLLRRYPLTGEGGGANPG
PSSMATPEDEEACRLDFDPKASSSSSSSSSQRRYKSPGYYILREILGQGG
LFRQMVQVLKGPGRHGDGGVAGLKAARVKAAASTALKQGLMLPGGRKSEA
DGGSLAAADRFGPGTGGGLGGPQQAGLATTPPPAAEPKLDPVEQGGPGPD
WSWWRERYIEYDGNMVIPLLSTSVLLSCGRNLPAGNMMSTLMASDPRECN
ALAEAYTYCLAADGLSLGGNNLLSLEGMLCPPNGEADGDFMTLDAALIGA
GTGGRNWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLGLVGPSATT
AVAGRGRRAAALPRATVCLEAVVNLLQSPVVVEQEPRLTEKCSHLVYKLC
SSKDTRVSALNRLRHSSGGSSNAAFFPQALRVALGDSGRSMMMMPPPEAK
AEASFGRHCLAWLLKAASIDLRTSCEVQQRARPVAGPPANAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021827Nup186/Nup192/Nup205