prot_Ecto-sp13_S_contig14311.3345.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14311.3345.1
Unique Nameprot_Ecto-sp13_S_contig14311.3345.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length270
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14311.3345.1 vs. uniprot
Match: D8LJ03_ECTSI (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ03_ECTSI)

HSP 1 Score: 526 bits (1354), Expect = 5.860e-186
Identity = 264/270 (97.78%), Postives = 267/270 (98.89%), Query Frame = 0 
Query:    1 MPGRRSSAGRARGARRQSASQIQWRQASATKVAETGGLEVSGGNGYIDPLKAVDKLKKHGKGLWGMQAIVAFGMSAIAVITDVRYGITYWYTNTAGGGKLREMQYVWAFFNTMCAMCGVWVYLLWNEAVVGVHRDRRVFRQKVHIWMSYFTWAFGLWTTAVVFVSFQTYSFSANYPTDLTCAFFGAVLCCTLSDVWALGKLCSLGTYAARLEEEWRLAPHEPTAPLAMADPLQELEEAMPDMDERDYRKIERERRRSSLAKAKERRKSKA 270
            MPGRRSSAGRARGARRQSASQIQWRQASAT+VAETGGLEVSGGNGYIDPLKA+DKLKKHGKGLWGMQA+VAFGMSAIAVITDVRYGITYWYTNTAGGGKLREMQYVWAFFNTMCAMCGVWVYLLWNEAVVGVHRDRRVFRQKVHIWMSYFTWAFGLWTTAVVFVSFQTYSFSANYPTDLTCAFFGAVLCC LSDVWALGKLCSLGTYAARLEEEWRLAPHEPTAPLAMADPLQELEEA PDMDER YRKIERERRRSSLAKAKERRKSKA
Sbjct:    1 MPGRRSSAGRARGARRQSASQIQWRQASATQVAETGGLEVSGGNGYIDPLKAIDKLKKHGKGLWGMQAVVAFGMSAIAVITDVRYGITYWYTNTAGGGKLREMQYVWAFFNTMCAMCGVWVYLLWNEAVVGVHRDRRVFRQKVHIWMSYFTWAFGLWTTAVVFVSFQTYSFSANYPTDLTCAFFGAVLCCALSDVWALGKLCSLGTYAARLEEEWRLAPHEPTAPLAMADPLQELEEATPDMDERGYRKIERERRRSSLAKAKERRKSKA 270
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BLAST of mRNA_Ecto-sp13_S_contig14311.3345.1 vs. uniprot
Match: A0A6H5KXK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK0_9PHAE)

HSP 1 Score: 451 bits (1160), Expect = 5.270e-159
Identity = 228/263 (86.69%), Postives = 233/263 (88.59%), Query Frame = 0 
Query:    1 MPGRRSSAGRARGARRQSASQIQWRQASATKVAETGGLEVSGGNGYIDPLKAVDKLKKHGKGLWGMQAIVAFGMSAIAVIT--DVRYGITYWYTNTAGGGKLREMQYVWAFFNTMCAMCGVWVYLLWNEAVVGVHRDRRVFRQKV--------------------------HIWMSYFTWAFGLWTTAVVFVSFQTYSFSANYPTDLTCAFFGAVLCCTLSDVWALGKLCSLGTYAARLEEEWRLAPHEPTAPLAMADPLQEL 235
            MPGRRSSAGRARGARRQSASQIQWRQASAT+VAETGGLEVSGGNGYIDPLKA+DKLKKHGKGLWGMQA+VAFGMSAIAVIT  +VRYGITYWYTNTAGGGKLREMQYVWAFFNTMCAMCGVWV+LLWNEAVVGVHRDRRVFRQKV                          HIWMSYFTWAFGLWTTAVVFVSFQTYSFSANYPTDLTCAFFGAVLCC LSDVWALGKLCSLGTYAARLEEEWRLAPHEPTAPLAM DPLQEL
Sbjct:    1 MPGRRSSAGRARGARRQSASQIQWRQASATQVAETGGLEVSGGNGYIDPLKAIDKLKKHGKGLWGMQAVVAFGMSAIAVITGDNVRYGITYWYTNTAGGGKLREMQYVWAFFNTMCAMCGVWVFLLWNEAVVGVHRDRRVFRQKVLMPYLPSSLDVRFLIVVMLQNTSIHVHIWMSYFTWAFGLWTTAVVFVSFQTYSFSANYPTDLTCAFFGAVLCCALSDVWALGKLCSLGTYAARLEEEWRLAPHEPTAPLAMTDPLQEL 263
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BLAST of mRNA_Ecto-sp13_S_contig14311.3345.1 vs. uniprot
Match: A0A835Z6J9_9STRA (B2-adapt-app_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J9_9STRA)

HSP 1 Score: 186 bits (471), Expect = 3.020e-52
Identity = 89/177 (50.28%), Postives = 112/177 (63.28%), Query Frame = 0 
Query:   44 NGYIDPLKAVDKLKKHGKGLWGMQAIVAFGMSAIAVITDVRYGITYWYTNTAGGGKLREMQYVWAFFNTMCAMCGVWVYLLWNEAVVGVHRDRRVFRQKVHIWMSYFTWAFGLWTTAVVFVSFQTYSFSANYPTDLTCAFFGAVLCCTLSDVWALGKLCSLGTYAARLEEEWRLAPH 220
            N +IDP  A+ ++ KH  GL   Q +V   M  +AV++D RYG   WYT+T  GGKLR+MQY WA FN   A  G  V + W E +    RD R+F  +++ + SYFTWAFG+W TAV+F SF  YSF   YPTDLT  F  A  C  +SD W + KLCS+ TY ARL+EEWR APH
Sbjct:   51 NRFIDPAVAIKRITKHTAGLVVAQIVVGVVMLIVAVMSDWRYGFAIWYTDTRAGGKLRDMQYAWAIFNLASAAWGAKVLVSWRERLERT-RDHRLFHTRIYAFASYFTWAFGVWATAVLFASFAGYSFDGLYPTDLTVFFVVAAACALVSDAWGISKLCSISTYCARLQEEWRAAPH 226
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14311.3345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJ03_ECTSI5.860e-18697.78B2-adapt-app_C domain-containing protein n=2 Tax=E... [more]
A0A6H5KXK0_9PHAE5.270e-15986.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6J9_9STRA3.020e-5250.28B2-adapt-app_C domain-containing protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 105..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14311contigEcto-sp13_S_contig14311:612..4301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14311.3345.1mRNA_Ecto-sp13_S_contig14311.3345.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14311 612..4301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14311.3345.1 ID=prot_Ecto-sp13_S_contig14311.3345.1|Name=mRNA_Ecto-sp13_S_contig14311.3345.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=270bp
MPGRRSSAGRARGARRQSASQIQWRQASATKVAETGGLEVSGGNGYIDPL
KAVDKLKKHGKGLWGMQAIVAFGMSAIAVITDVRYGITYWYTNTAGGGKL
REMQYVWAFFNTMCAMCGVWVYLLWNEAVVGVHRDRRVFRQKVHIWMSYF
TWAFGLWTTAVVFVSFQTYSFSANYPTDLTCAFFGAVLCCTLSDVWALGK
LCSLGTYAARLEEEWRLAPHEPTAPLAMADPLQELEEAMPDMDERDYRKI
ERERRRSSLAKAKERRKSKA
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