mRNA_Ecto-sp13_S_contig14298.3333.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14298.3333.1
Unique NamemRNA_Ecto-sp13_S_contig14298.3333.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14298.3333.1 vs. uniprot
Match: A0A6H5JHA1_9PHAE (RB_A domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA1_9PHAE)

HSP 1 Score: 747 bits (1929), Expect = 4.630e-252
Identity = 484/650 (74.46%), Postives = 499/650 (76.77%), Query Frame = 1
Query:    1 LALYDDDQPAAEAEDARPPRTTTGADGRGGGTCRLGDLLRQCNTGVKGFMEHLTLVAGRLPGPLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNERDSLFPPAIFGPSSAAFGNDGDSNNMTNGVLPSQAAESXXXXXXXXXXXXXXXXXXXXXXXXAGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSSXXXXXXXXPRGCYSRRHSSLLSEGTGASGRLEGGREVVSSPAAGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----TYGGEAALLAKLSASGRCPAKEVRAMSAHVVEVIEALLQEGIVVSHHAPAPATSSPCIGGEHGTAVATAAAAAA-DVSLMDTTAAESSAAPVDVPRHQQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGGXXXXXHRGVVLDEAFVLTPDLRDTVGTPRYGGSTPRRSALTPSVSRTSRQLFQDYQRVSNATAVEPLERGEGEAQHCLALSFGPPEDNNGPSXXXXXXXXXXXXXXXA----VQAGSPATEGQVRTAVAXXXXXXXAGSFPESILPPGGRQAXXXXXXXXXVGGGGFGILRNPLASRSSRLGGATGMAGIAVGGGGGARGGPPETPVMAVM 1920
            LALYDDD+P AE EDA PP TT GADGRGGGTCRLGDLLRQ                                    G V+            N+RDSLFPPAI GPSSAA  NDGDSNNMTNG LPSQAAE+                        AGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSS XXXXX  PRGCYSRR SSLL++G+GASG LEGGREV S+PAA SE             XXXXXXXXXXXXXXXXXXXXXXXX     TYGGEAALLAKLSASGRCPA+EVRAMS HVVEVIEALLQEGIVVSH APAPATSSPC GGEHGT +ATAAAAAA DVSLMDT A E++AAPVDVPRHQQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRG      HRGVVLDEAFVLTPDLRDTVGTP YGGSTPRRSALTPSVSRTSRQLFQDYQRVSNATAVEP ERGEGEAQHCLALSFGPPED+NGPS  XXXXXXXXXXXXX     VQAGSPATE QVR    XXXXXX AG FPESILPPG RQA         VGGGGFGILR+PLASRSSRLGGA GMAGIAVGG   ARGGPPETPVMA +
Sbjct:   72 LALYDDDEPTAETEDALPPTTTMGADGRGGGTCRLGDLLRQ------------------------------------GWVL------------NQRDSLFPPAIVGPSSAALSNDGDSNNMTNGALPSQAAENKNKSGGADETSDDHDISSAATAA-AGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSSSXXXXXSFPRGCYSRRRSSLLTDGSGASGGLEGGREVASAPAADSEPTTAVAAQRAGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYGGEAALLAKLSASGRCPAEEVRAMSTHVVEVIEALLQEGIVVSHRAPAPATSSPCTGGEHGTTIATAAAAAAVDVSLMDTAADENAAAPVDVPRHQQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGRGGGGGHRGVVLDEAFVLTPDLRDTVGTPHYGGSTPRRSALTPSVSRTSRQLFQDYQRVSNATAVEPQERGEGEAQHCLALSFGPPEDSNGPSASXXXXXXXXXXXXXXXXXXVQAGSPATESQVRMXXXXXXXXXAAGRFPESILPPGDRQAGGGSPRSGGVGGGGFGILRDPLASRSSRLGGAAGMAGIAVGGXXXARGGPPETPVMATV 672          
BLAST of mRNA_Ecto-sp13_S_contig14298.3333.1 vs. uniprot
Match: D7G8E5_ECTSI (Putative retinoblastoma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E5_ECTSI)

HSP 1 Score: 701 bits (1809), Expect = 1.140e-236
Identity = 447/592 (75.51%), Postives = 455/592 (76.86%), Query Frame = 1
Query:    1 LALYDDDQPAAEAEDARPPRTTTGADGRGGGTCRLGDLLRQCNTGVKGFMEHLTLVAGRLPGPLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNERDSLFPPAIFGPSSAAFGNDGDSNNMTNGVLPSQAAESXXXXXXXXXXXXXXXXXXXXXXXXAGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSSXXXXXXXX---------PRGCYSRRHSSLLSEGTGASGRLEGGREVVSSPAAGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TYGGEAALLAKLSASGRCPAKEVRAMSAHVVEVIEALLQEGIVVSHHAPAPATSSPCIGGEHGTAVATAAAAAADVSLMDTTAAESSAAPVDVPRHQQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGGXXXXXHRGVVLDEAFVLTPDLRDTVGTPRYGGSTPRRSALTPSVSRTSRQLFQDYQRVSNATAVEPLERGEGEAQHCLALSFGPPEDNNGPSXXXXXXXXXXXXXXXAVQAGSPATEGQVRTAVAXXXXXXXAGSFPESILPPGGRQ 1740
            LALYDDD+PAAEAEDA+P  TTTGADGRGGGTCRLGDLLRQCNTGVKGFMEHLTLVAGRLPGPLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNERDSLFPPAIFGPSSAAFGNDGDSNNMTNGVLPSQAAE+    XXXXXX              AGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNS XXXXXXXX         PRGCYSRR SSLL++G+GASG LEGGRE  S+PAA SE                       XXXXXXXXXXXXXX   TYGGEAALLAKLSASGRCPAKEVRAMSAHVVEVIEALLQEGIVVSH                                                  QQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGGXXXXXHRGVVLDEAFVLTPDLRDTVGTPRYGGSTPRRSALTPSVSRTSRQLFQDYQRVS A AVEP ERGEGEAQHCLALSFGPPED+NGPS XXXXXXXXXXXXXX                     XXXX GSFPESILPPGGRQ
Sbjct:   25 LALYDDDEPAAEAEDAQPRATTTGADGRGGGTCRLGDLLRQCNTGVKGFMEHLTLVAGRLPGPLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNERDSLFPPAIFGPSSAAFGNDGDSNNMTNGVLPSQAAENNKGGXXXXXXTSDDHDINSAAVAAAGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCLNLVLAALGAVVWNSXXXXXXXXXXXXXXXXXXPRGCYSRRRSSLLADGSGASGGLEGGREGASAPAADSEPATAVAAPRAGSEGGEAVESETAXXXXXXXXXXXXXXXXXTYGGEAALLAKLSASGRCPAKEVRAMSAHVVEVIEALLQEGIVVSH--------------------------------------------------QQLASRAERVAGVFHPSVAGENVDRLDACYWARVSQRGGXXXXXHRGVVLDEAFVLTPDLRDTVGTPRYGGSTPRRSALTPSVSRTSRQLFQDYQRVSTAAAVEPQERGEGEAQHCLALSFGPPEDSNGPSAXXXXXXXXXXXXXXXXXX-----------------XXXXXGSFPESILPPGGRQ 549          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14298.3333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHA1_9PHAE4.630e-25274.46RB_A domain-containing protein n=2 Tax=Ectocarpus ... [more]
D7G8E5_ECTSI1.140e-23675.51Putative retinoblastoma n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14298contigEcto-sp13_S_contig14298:359..4452 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score709.5
Seed ortholog evalue1.4e-201
Seed eggNOG ortholog2880.D7G8E5
Preferred nameRB1
Model size1923
KEGG koko:K04681,ko:K06618
KEGG Pathwayko01522,ko04110,ko04218,ko04350,ko04934,ko05161,ko05165,ko05166,ko05167,ko05169,ko05200,ko05203,ko05212,ko05214,ko05215,ko05218,ko05219,ko05220,ko05222,ko05223,ko05224,ko05225,ko05226,map01522,map04110,map04218,map04350,map04934,map05161,map05165,map05166,map05167,map05169,map05200,map05203,map05212,map05214,map05215,map05218,map05219,map05220,map05222,map05223,map05224,map05225,map05226
KEGG ModuleM00692
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000082,GO:0000083,GO:0000122,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000819,GO:0000902,GO:0000904,GO:0000976,GO:0000987,GO:0001047,GO:0001067,GO:0001085,GO:0001102,GO:0001558,GO:0001708,GO:0001894,GO:0001932,GO:0001933,GO:0002262,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0002761,GO:0002763,GO:0003170,GO:0003176,GO:0003179,GO:0003180,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006275,GO:0006325,GO:0006338,GO:0006349,GO:0006355,GO:0006357,GO:0006469,GO:0006725,GO:0006807,GO:0006915,GO:0006996,GO:0007049,GO:0007050,GO:0007059,GO:0007062,GO:0007063,GO:0007064,GO:0007088,GO:0007093,GO:0007127,GO:0007129,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0007399,GO:0007507,GO:0007517,GO:0007519,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008285,GO:0008356,GO:0008589,GO:0008608,GO:0009410,GO:0009553,GO:0009555,GO:0009566,GO:0009567,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010016,GO:0010026,GO:0010033,GO:0010052,GO:0010090,GO:0010103,GO:0010374,GO:0010377,GO:0010389,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010648,GO:0010941,GO:0010948,GO:0010965,GO:0012501,GO:0014070,GO:0014706,GO:0015630,GO:0016043,GO:0016514,GO:0016604,GO:0016605,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019899,GO:0019900,GO:0019904,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022414,GO:0022619,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030071,GO:0030097,GO:0030099,GO:0030154,GO:0030182,GO:0030218,GO:0030518,GO:0030521,GO:0030522,GO:0031134,GO:0031156,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031331,GO:0031347,GO:0031348,GO:0031399,GO:0031400,GO:0031625,GO:0031974,GO:0031981,GO:0032092,GO:0032101,GO:0032102,GO:0032103,GO:0032268,GO:0032269,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032875,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033365,GO:0033613,GO:0033673,GO:0033993,GO:0034086,GO:0034088,GO:0034101,GO:0034349,GO:0034502,GO:0034613,GO:0034641,GO:0035189,GO:0035257,GO:0035258,GO:0035295,GO:0035556,GO:0035914,GO:0040008,GO:0040012,GO:0040017,GO:0040029,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042551,GO:0042592,GO:0042692,GO:0042802,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043353,GO:0043388,GO:0043393,GO:0043401,GO:0043433,GO:0043549,GO:0043550,GO:0043565,GO:0043900,GO:0044087,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044798,GO:0044843,GO:0045132,GO:0045143,GO:0045165,GO:0045445,GO:0045595,GO:0045596,GO:0045597,GO:0045637,GO:0045639,GO:0045649,GO:0045651,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045859,GO:0045862,GO:0045879,GO:0045892,GO:0045893,GO:0045930,GO:0045931,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0048229,GO:0048232,GO:0048285,GO:0048366,GO:0048367,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048565,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0048871,GO:0048872,GO:0050678,GO:0050680,GO:0050681,GO:0050727,GO:0050728,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0050920,GO:0050921,GO:0050923,GO:0050924,GO:0051052,GO:0051090,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051219,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051321,GO:0051338,GO:0051348,GO:0051402,GO:0051427,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0055046,GO:0055123,GO:0060249,GO:0060255,GO:0060341,GO:0060537,GO:0060538,GO:0060548,GO:0061061,GO:0061676,GO:0061982,GO:0062033,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070192,GO:0070603,GO:0070727,GO:0070887,GO:0070997,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071459,GO:0071466,GO:0071495,GO:0071514,GO:0071695,GO:0071704,GO:0071840,GO:0071922,GO:0071930,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090230,GO:0090329,GO:0090558,GO:0090575,GO:0090626,GO:0090627,GO:0090698,GO:0097159,GO:0097284,GO:0097718,GO:0098813,GO:0099402,GO:0120036,GO:0140013,GO:0140014,GO:0140110,GO:1900120,GO:1900122,GO:1901360,GO:1901363,GO:1901800,GO:1901970,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902099,GO:1902101,GO:1902105,GO:1902107,GO:1902494,GO:1902679,GO:1902680,GO:1902749,GO:1902806,GO:1902807,GO:1902903,GO:1902905,GO:1903046,GO:1903047,GO:1903052,GO:1903053,GO:1903055,GO:1903364,GO:1903506,GO:1903507,GO:1903508,GO:1903664,GO:1903665,GO:1903667,GO:1903669,GO:1903706,GO:1903708,GO:1903827,GO:1903866,GO:1903943,GO:1903944,GO:1904019,GO:1904026,GO:1904028,GO:1904035,GO:1904036,GO:1904760,GO:1904761,GO:1904949,GO:1905314,GO:1905634,GO:1905818,GO:1905820,GO:1990837,GO:2000026,GO:2000036,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000653,GO:2000677,GO:2000679,GO:2001141,GO:2001252
Exons5
EggNOG free text desc.regulation of cell cycle
EggNOG OGsKOG1010@1,KOG1010@2759
Ec32 ortholog descriptionRetinoblastoma
Ec32 orthologEc-14_002750.1
Cds size1923
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462764.3374267-CDS-Ecto-sp13_S_contig14298:358..8111681462764.3374267-CDS-Ecto-sp13_S_contig14298:358..811Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14298 359..811 -
1681462764.3488448-CDS-Ecto-sp13_S_contig14298:1375..14811681462764.3488448-CDS-Ecto-sp13_S_contig14298:1375..1481Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14298 1376..1481 -
1681462764.3580043-CDS-Ecto-sp13_S_contig14298:1897..29771681462764.3580043-CDS-Ecto-sp13_S_contig14298:1897..2977Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14298 1898..2977 -
1681462764.3674376-CDS-Ecto-sp13_S_contig14298:3383..35441681462764.3674376-CDS-Ecto-sp13_S_contig14298:3383..3544Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14298 3384..3544 -
1681462764.3763106-CDS-Ecto-sp13_S_contig14298:4329..44521681462764.3763106-CDS-Ecto-sp13_S_contig14298:4329..4452Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14298 4330..4452 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14298.3333.1prot_Ecto-sp13_S_contig14298.3333.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14298 359..4452 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14298.3333.1

>prot_Ecto-sp13_S_contig14298.3333.1 ID=prot_Ecto-sp13_S_contig14298.3333.1|Name=mRNA_Ecto-sp13_S_contig14298.3333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=641bp
LALYDDDQPAAEAEDARPPRTTTGADGRGGGTCRLGDLLRQCNTGVKGFM
EHLTLVAGRLPGPLSARLDGDLRVMKEGIVVTKMLYGKYRQIWNERDSLF
PPAIFGPSSAAFGNDGDSNNMTNGVLPSQAAESNNKGGGGGGDTSDDHDI
SSAAAAAAGFPLPLPPSDPQALPRLGWYLYLLTKDVLGFRSSNAAFVRCL
NLVLAALGAVVWNSSSSSSSSSSPRGCYSRRHSSLLSEGTGASGRLEGGR
EVVSSPAAGSEPTTAVAAQRAGNEGGEAVESQTTATGGGGGGGDGGGGTY
GGEAALLAKLSASGRCPAKEVRAMSAHVVEVIEALLQEGIVVSHHAPAPA
TSSPCIGGEHGTAVATAAAAAADVSLMDTTAAESSAAPVDVPRHQQLASR
AERVAGVFHPSVAGENVDRLDACYWARVSQRGGGGGGGHRGVVLDEAFVL
TPDLRDTVGTPRYGGSTPRRSALTPSVSRTSRQLFQDYQRVSNATAVEPL
ERGEGEAQHCLALSFGPPEDNNGPSASSAAAAAAAAAAVAAVQAGSPATE
GQVRTAVAAAAVATAAGSFPESILPPGGRQAGGGSPRSGGVGGGGFGILR
NPLASRSSRLGGATGMAGIAVGGGGGARGGPPETPVMAVME
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mRNA from alignment at Ecto-sp13_S_contig14298:359..4452-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14298.3333.1 ID=mRNA_Ecto-sp13_S_contig14298.3333.1|Name=mRNA_Ecto-sp13_S_contig14298.3333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4094bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14298:359..4452- (Ectocarpus species13 EcNAP12_S_4_19m)
CTCGCCCTGTACGACGACGACCAGCCCGCGGCTGAGGCCGAGGACGCGCG ACCACCGAGGACGACGACGGGCGCCGACGGCCGCGGTGGCGGGACTTGCA GGCTAGGGGACTTGCTTCGACAGGTACTGCACGCGTCCTCCATGATGATG CCTCTCGAGTGCTTGAGCTCCTCCTTAAGATACCGCCGGCGTGTACCGTC ATTCAACCCCCCTTCGGAGTGATACGGCCTGGTTGGGCTGTTGGAAGTGC TCGGTCGGCCGCAGCAGAGTGGTGGTTGAGTTTTGTTCATCGTTGCTGTT CCCACCTGTGTATCGGGGTAGTGGTGATGCCGAGGAATGCTTTCGGTATA TAGACTCTGCTGTGTCGTTTGGTCGATGGCCACCGATTCTCTGCACGTGC ACGCTACCGCTCCTCACAAGACGACACCGGCGCTCGCCACCCCCCCTCTC ATGTCTTGTCGCCGACCGACAACCTATGGTGGCTTATTGTTCCTTTTGCA ACGCCTAGGGAAGTTTTTTGTATCGTTTGGTATTGTGTTGTTCATGTGTG CGAATAACTCGCAATTGCAAAAGAGTAGGCACGTTCAACTGAGGCCTTGC ATGTGCGGGTTACTGTTTATAATACGGAACTTGCGGTGCTCCGATGCCTG CATGCCAGATTTGTCTACCGAGCTAGTGTGAGCGAGCAACAGCAACAGTA GCAGCAGCAGCAACAACAATGTCAACAGCAACAACGAACACAACAACGAA AGCGACAACAACCTCCTCGTTGGTTCTATCACGATGCACCATGGTCCCTC TGAGAGCCATAGCCCCGCTTTCCCGAAATCACACGTAGTTCACGACGCTT TGCCTGTTGTCTCTTCTTCGGCCCCCGCATCCCGCCGCGGCACGCGCCAC ATCATCAGTGCAACACCGGCGTCAAGGGCTTCATGGAACACCTCACACTG GTAGCGGGTCGCCTGCCAGGGCCCCTGTCAGCACGCCTGGACGGAGACCT GAGGGTGATGAAGGAGGGCATCGTCGTTACCAAGATGCTGTACGGGAAGT ACCGGCAAATCTGGAACGAGTGAGTTTTTTTTCTTTTCGGGGGGGGGAGC GGCGGGGCACGTGAAAGTACAGGGATCCTAGACAGGCGGCTGCTGTTCCA GATTTGCTTGGATGGATGTGTGGATGCGTTTTCGGTACTGCATGGCGTAG GGGTCATATTGCTGAGCCGCCCCAAACTTCAGGGAAAGCCGCTAACTCCG ATGGAGTGGCGTAACGACTTCACCCCCCCTCCCCACCCCTGCGTTCCTAT TTTTTGTTGCCGTGAATCCCCCGCCCCCCTTCTTATTAGAAAGTGTTCGT GTTTATTACCGGGCGTGACGTCTTGTTCTCATTGGTCAGCCGGTTAGCGC GGTGGATGCTAATAATAAGTAACGCACACACTACCTGCGTTGCCGTCCCG CTGCCGATTTTGTCGTGTGTCGCAGACGAGATTCGCTATTCCCGCCGGCG ATTTTCGGGCCGAGTTCCGCCGCCTTCGGCAACGACGGCGACAGCAACAA CATGACCAACGGGGTGTTGCCATCGCAGGCTGCAGAAAGCAATAACAAGG GTGGCGGCGGCGGCGGCGACACCAGCGACGACCACGACATCAGTAGTGCT GCCGCCGCCGCAGCGGGGTTTCCGCTGCCGCTGCCGCCGTCCGACCCGCA GGCGCTGCCCCGCCTGGGGTGGTACCTGTACCTGCTGACCAAGGACGTGC TCGGGTTTCGCAGCTCCAACGCGGCGTTCGTGCGCTGCCTCAACCTCGTC CTCGCCGCGCTCGGCGCCGTGGTGTGGAACTCCTCCTCTTCTTCTTCTTC TTCCTCGTCTCCTCGAGGCTGCTACTCGCGGCGGCATTCGTCTCTCCTTT CCGAGGGCACCGGCGCAAGCGGGAGGCTAGAGGGCGGGCGGGAAGTGGTT AGTTCTCCTGCTGCTGGCTCTGAACCAACAACGGCGGTGGCGGCTCAGCG GGCGGGAAATGAAGGGGGGGAGGCCGTCGAGAGCCAAACGACGGCGACCG GCGGCGGCGGCGGCGGCGGAGATGGCGGGGGGGGCACGTACGGCGGCGAG GCGGCGCTGCTTGCCAAGCTGAGCGCCAGCGGCAGGTGCCCGGCGAAAGA GGTGCGGGCGATGAGCGCACACGTGGTAGAGGTGATCGAGGCACTACTCC AGGAGGGCATCGTCGTGTCTCACCACGCCCCCGCTCCGGCCACCTCCTCA CCGTGTATAGGAGGAGAGCATGGCACAGCCGTTGCTACTGCTGCTGCTGC TGCTGCTGATGTGTCTTTGATGGACACAACAGCAGCCGAAAGTTCTGCTG CGCCCGTTGACGTACCGCGACATCAGCAGCTGGCCAGCCGGGCGGAGCGA GTCGCCGGAGTGTTTCACCCCTCTGTTGCCGGGGAGAACGTGGACAGACT CGACGCGTGCTACTGGGCGCGGGTGTCGCAGCGGGGGGGTGGCGGGGGCG GGGGTCACAGGGGCGTTGTGTTGGACGAGGCATTTGTGCTCACGCCAGAC CTGAGGTACGTGGAGTCAAGTAAGCTGGGTGCACAGCCGTTGTCTTGATG GTGGTGGTGCGGCTGCCGAGCGGTGGTTGGTTGGCGAAGGGAAGACGTGG TTTCTGTCTCCTATACGTCAGCCAAGTGGTTCGGGAGAAGTTGCCCTTTT GCAGGCAGCCTGCCGTGGCTTCGCTCGTCTCCTGCTGCTGACCAAGCCGA TTTCATGATAACTTCGAACTGCAGCAGCATCACATACCTGCCTGTTGCTT TTTGATGTGTCACACTGCTCCGATGTTTTACGTGTGTTAACAGGAGAGCT AAATTGCCTCTTATTCCGCTGCTGTTTGTCGCGCTGGTTCGACTGCGCTT CACGTGTTCTCAACCCTCACTACTTGCGGCGTTCATCGTTATACCCCCGC CACCCCGTTCGGATGCTGCAGAGATACCGTTGGAACTCCCCGCTACGGAG GGTCTACCCCTCGCAGGTCTGCTCTGACGCCAAGCGTTTCTCGCACAAGC CGCCAGCTCTTCCAAGACTACCAGAGGGTGCGGAGAGTGTATGTCACTTA TTTTTGTTTTGGTCCGTGTGATGTACACACCACACTCTTCACGGCACGGC CTTTGCTTTTTTGTGGTGGACTACCGTGGACTGCACAAGAAATAACTCCC CCCTGGATCGATTTTCAAGGCTCGATTACTCGGCAAGAAAATCGGTGACG GTGCCGAAAGTTGCGGCGGTGGAACACCTTCTCGTTAAGAGCTTTCCAAC AACGTTGATATTGGCATCCTCTTCGTCGTGGAGAAACCGAGCGTTGAAGA TCGGTCCAGGGAGTGTGATATCTTATGCAACCTACGGTACTAGTTTAGCG GACTGGCTAGCGCTGTGTTGGCGTAACTTTTCCCTCCCGTCGGGAAGAAA CTCAGCGCATCGGCCAAATCGCCGCGTCTACTCCCTCCCCGGCTTCGTCT TTAGAGGTATATGTATGGTACATTAATGTATGGTAAATGGACGAATGAGC ATAGTAGGCAAGCATCAAGCTAAGCACCCCCCCCCCGGTCGGCACGCCGT TTCCCGGCCCCCCTTTCGCTCTCTCCCCTCTACTATTCCAGGTCTCGAAC GCCACTGCCGTCGAACCCCTGGAGCGAGGGGAGGGTGAGGCCCAACATTG CCTCGCCCTGTCCTTCGGGCCCCCTGAGGACAACAACGGGCCCTCCGCTA GCTCGGCGGCAGCAGCGGCAGCAGCAGCAGCAGCAGTAGCAGCCGTCCAA GCAGGCTCACCTGCCACCGAAGGCCAAGTCAGAACGGCAGTGGCGGCAGC GGCGGTGGCGACGGCCGCGGGTAGCTTTCCGGAGTCGATCTTGCCACCGG GGGGCCGACAGGCCGGAGGAGGCAGTCCCCGCAGCGGCGGGGTTGGAGGC GGCGGGTTCGGCATCTTGCGGAACCCCTTGGCGTCGCGGTCGTCGAGGCT GGGTGGTGCAACCGGCATGGCGGGTATCGCAGTAGGAGGAGGAGGGGGTG CCAGAGGAGGCCCCCCCGAAACTCCCGTCATGGCCGTTATGGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14298:359..4452-

>mRNA_Ecto-sp13_S_contig14298.3333.1 ID=mRNA_Ecto-sp13_S_contig14298.3333.1|Name=mRNA_Ecto-sp13_S_contig14298.3333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1923bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14298:359..4452- (Ectocarpus species13 EcNAP12_S_4_19m)
CTCGCCCTGTACGACGACGACCAGCCCGCGGCTGAGGCCGAGGACGCGCG
ACCACCGAGGACGACGACGGGCGCCGACGGCCGCGGTGGCGGGACTTGCA
GGCTAGGGGACTTGCTTCGACAGTGCAACACCGGCGTCAAGGGCTTCATG
GAACACCTCACACTGGTAGCGGGTCGCCTGCCAGGGCCCCTGTCAGCACG
CCTGGACGGAGACCTGAGGGTGATGAAGGAGGGCATCGTCGTTACCAAGA
TGCTGTACGGGAAGTACCGGCAAATCTGGAACGAACGAGATTCGCTATTC
CCGCCGGCGATTTTCGGGCCGAGTTCCGCCGCCTTCGGCAACGACGGCGA
CAGCAACAACATGACCAACGGGGTGTTGCCATCGCAGGCTGCAGAAAGCA
ATAACAAGGGTGGCGGCGGCGGCGGCGACACCAGCGACGACCACGACATC
AGTAGTGCTGCCGCCGCCGCAGCGGGGTTTCCGCTGCCGCTGCCGCCGTC
CGACCCGCAGGCGCTGCCCCGCCTGGGGTGGTACCTGTACCTGCTGACCA
AGGACGTGCTCGGGTTTCGCAGCTCCAACGCGGCGTTCGTGCGCTGCCTC
AACCTCGTCCTCGCCGCGCTCGGCGCCGTGGTGTGGAACTCCTCCTCTTC
TTCTTCTTCTTCCTCGTCTCCTCGAGGCTGCTACTCGCGGCGGCATTCGT
CTCTCCTTTCCGAGGGCACCGGCGCAAGCGGGAGGCTAGAGGGCGGGCGG
GAAGTGGTTAGTTCTCCTGCTGCTGGCTCTGAACCAACAACGGCGGTGGC
GGCTCAGCGGGCGGGAAATGAAGGGGGGGAGGCCGTCGAGAGCCAAACGA
CGGCGACCGGCGGCGGCGGCGGCGGCGGAGATGGCGGGGGGGGCACGTAC
GGCGGCGAGGCGGCGCTGCTTGCCAAGCTGAGCGCCAGCGGCAGGTGCCC
GGCGAAAGAGGTGCGGGCGATGAGCGCACACGTGGTAGAGGTGATCGAGG
CACTACTCCAGGAGGGCATCGTCGTGTCTCACCACGCCCCCGCTCCGGCC
ACCTCCTCACCGTGTATAGGAGGAGAGCATGGCACAGCCGTTGCTACTGC
TGCTGCTGCTGCTGCTGATGTGTCTTTGATGGACACAACAGCAGCCGAAA
GTTCTGCTGCGCCCGTTGACGTACCGCGACATCAGCAGCTGGCCAGCCGG
GCGGAGCGAGTCGCCGGAGTGTTTCACCCCTCTGTTGCCGGGGAGAACGT
GGACAGACTCGACGCGTGCTACTGGGCGCGGGTGTCGCAGCGGGGGGGTG
GCGGGGGCGGGGGTCACAGGGGCGTTGTGTTGGACGAGGCATTTGTGCTC
ACGCCAGACCTGAGAGATACCGTTGGAACTCCCCGCTACGGAGGGTCTAC
CCCTCGCAGGTCTGCTCTGACGCCAAGCGTTTCTCGCACAAGCCGCCAGC
TCTTCCAAGACTACCAGAGGGTCTCGAACGCCACTGCCGTCGAACCCCTG
GAGCGAGGGGAGGGTGAGGCCCAACATTGCCTCGCCCTGTCCTTCGGGCC
CCCTGAGGACAACAACGGGCCCTCCGCTAGCTCGGCGGCAGCAGCGGCAG
CAGCAGCAGCAGCAGTAGCAGCCGTCCAAGCAGGCTCACCTGCCACCGAA
GGCCAAGTCAGAACGGCAGTGGCGGCAGCGGCGGTGGCGACGGCCGCGGG
TAGCTTTCCGGAGTCGATCTTGCCACCGGGGGGCCGACAGGCCGGAGGAG
GCAGTCCCCGCAGCGGCGGGGTTGGAGGCGGCGGGTTCGGCATCTTGCGG
AACCCCTTGGCGTCGCGGTCGTCGAGGCTGGGTGGTGCAACCGGCATGGC
GGGTATCGCAGTAGGAGGAGGAGGGGGTGCCAGAGGAGGCCCCCCCGAAA
CTCCCGTCATGGCCGTTATGGAG
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