prot_Ecto-sp13_S_contig14269.3312.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14269.3312.1
Unique Nameprot_Ecto-sp13_S_contig14269.3312.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length95
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14269.3312.1 vs. uniprot
Match: A0A6H5K0V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V0_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.720e-46
Identity = 81/93 (87.10%), Postives = 87/93 (93.55%), Query Frame = 0 
Query:    1 MRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLGFKVQSWSMADEVVRGTFDSISSLLRIRAVTPRKANSMACRSRDASPHETAAE 93
            MR ESEATEILGVDAEL+VNFECVNCHSIHLGVP PAKG+G +VQSWSMADEVVRGTFDSISS LR+RAV+PRKANS+A RSRDASPHE AAE
Sbjct:  262 MRGESEATEILGVDAELRVNFECVNCHSIHLGVPFPAKGVGSEVQSWSMADEVVRGTFDSISSWLRVRAVSPRKANSIASRSRDASPHEAAAE 354
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BLAST of mRNA_Ecto-sp13_S_contig14269.3312.1 vs. uniprot
Match: D8LNQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ4_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 8.490e-38
Identity = 73/92 (79.35%), Postives = 77/92 (83.70%), Query Frame = 0 
Query:    1 MRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLGFKVQSWSMADEVVRGTFDSISSLLRIRAVTPRKANSMACRSRDASPHETAA 92
            MRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLG++VQSWSMADEVVRGTFDSISS LR+RA  P  A     R R  +P E AA
Sbjct:  328 MRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLGYEVQSWSMADEVVRGTFDSISSWLRVRA-GPSSATRGGRRQRQPAPPEKAA 418
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14269.3312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0V0_9PHAE1.720e-4687.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ4_ECTSI8.490e-3879.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14269contigEcto-sp13_S_contig14269:2929..3213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14269.3312.1mRNA_Ecto-sp13_S_contig14269.3312.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14269 2760..3947 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14269.3312.1 ID=prot_Ecto-sp13_S_contig14269.3312.1|Name=mRNA_Ecto-sp13_S_contig14269.3312.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp
MRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLGFKVQSWSMA
DEVVRGTFDSISSLLRIRAVTPRKANSMACRSRDASPHETAAEE*
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