mRNA_Ecto-sp13_S_contig14153.3231.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14153.3231.1
Unique NamemRNA_Ecto-sp13_S_contig14153.3231.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: D7G728_ECTSI (Cysteine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G728_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 1.440e-136
Identity = 199/202 (98.51%), Postives = 200/202 (99.01%), Query Frame = 1 
Query:    1 MAASTATAGAAAGVSVGIVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            MAASTATAGAAAGVSVGIVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKM+ALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTG EILAQ GGKIDAWVAAVGTGGTLAG
Sbjct:    1 MAASTATAGAAAGVSVGIVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMEALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGPEILAQAGGKIDAWVAAVGTGGTLAG 202
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BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: A0A6H5JN69_9PHAE (PALP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN69_9PHAE)

HSP 1 Score: 304 bits (779), Expect = 4.110e-103
Identity = 149/151 (98.68%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:  154 MNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            MNPGGSVKDRAAKYLIMDAEKKG LKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTG EILAQTGGKIDAWVAAVGTGGTLAG
Sbjct:    1 MNPGGSVKDRAAKYLIMDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAG 151
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BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: UPI000B49F7A6 (cysteine synthase A n=1 Tax=Calothrix rhizosoleniae TaxID=888997 RepID=UPI000B49F7A6)

HSP 1 Score: 285 bits (729), Expect = 1.060e-93
Identity = 142/185 (76.76%), Postives = 158/185 (85.41%), Query Frame = 1 
Query:   52 IVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            I  GF G VGNTPL+RL SLS +TGCEIL KAE++NPGGSVKDRAA Y+I DAE KG+LKPGGTVVEGTAGNTGIGLAH+C AKGYKC+I IPETQS+EKMDALR LGAEVRPVPAVPYK+  NY   + R AEEM+NA+WA+QFDN AN+LAHYETTG EI AQT G +DAWVAA GTGGT AG
Sbjct:    3 IKNGFVGTVGNTPLIRLDSLSQETGCEILVKAEFLNPGGSVKDRAALYIIEDAEAKGLLKPGGTVVEGTAGNTGIGLAHICNAKGYKCLIIIPETQSQEKMDALRALGAEVRPVPAVPYKNPNNYVKLSGRIAEEMDNAIWANQFDNVANRLAHYETTGPEIWAQTDGTVDAWVAATGTGGTYAG 187
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BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: A0A1J1LFC7_9CYAN (Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase) n=17 Tax=Oscillatoriales TaxID=1150 RepID=A0A1J1LFC7_9CYAN)

HSP 1 Score: 285 bits (729), Expect = 1.160e-93
Identity = 141/185 (76.22%), Postives = 157/185 (84.86%), Query Frame = 1 
Query:   52 IVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            I  GF G +GNTPL+RL S SD+TGCEIL KAE++NPGGSVKDRAA Y+I DAE+KG+LKPGGTVVEGTAGNTGIGLAH+C AKGYKC+I IP+TQS EKM+ALR LGAEVRPVPAVPYKD  NY   + R A EMENAVWA+QFDN AN+LAHYETTG EI  QT GK+DAWVAA GTGGT AG
Sbjct:    3 IKNGFVGTIGNTPLIRLNSFSDETGCEILGKAEFLNPGGSVKDRAALYIIKDAEEKGLLKPGGTVVEGTAGNTGIGLAHICNAKGYKCLIIIPDTQSPEKMEALRTLGAEVRPVPAVPYKDPNNYVRLSGRLASEMENAVWANQFDNLANRLAHYETTGPEIWEQTDGKVDAWVAATGTGGTFAG 187
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BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: A0A6P0QL18_9CYAN (Cysteine synthase A n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=A0A6P0QL18_9CYAN)

HSP 1 Score: 285 bits (728), Expect = 1.500e-93
Identity = 140/182 (76.92%), Postives = 157/182 (86.26%), Query Frame = 1 
Query:   61 GFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            GF G VGNTPL+RL S S++TGCEIL KAE++NPGGSVKDRAA Y+I DAEKKG+LKPGGTVVEGTAGNTGIGLAH+C AKGYKC+I IP+TQS+EKMDALR LGAEVRPVPAVPYKD  NY   + R A EMENA+WA+QFDN AN+LAHY+TTG EI  QT GK+DAWV A GTGGTLAG
Sbjct:    6 GFIGTVGNTPLIRLNSFSEQTGCEILGKAEFLNPGGSVKDRAALYIIQDAEKKGLLKPGGTVVEGTAGNTGIGLAHICNAKGYKCLIVIPDTQSQEKMDALRTLGAEVRPVPAVPYKDPNNYVKLSGRIAAEMENAIWANQFDNLANRLAHYDTTGREIWEQTDGKVDAWVTATGTGGTLAG 187
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BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: A0A1Z4LL21_9CYAN (Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A1Z4LL21_9CYAN)

HSP 1 Score: 284 bits (727), Expect = 2.120e-93
Identity = 141/185 (76.22%), Postives = 156/185 (84.32%), Query Frame = 1 
Query:   52 IVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            I  GF G VGNTPL+RL S S++TGCEILAKAE++NPGGSVKDRAA Y+I DAE KG+LKPGGTVVEGTAGNTGIGLAH+C AKGYKC+I IPETQS+EKMDALR LGAEVRPVPAVPYKD  NY   + R A EMENA+WA+QFDN AN+ AHYETTG EI  QT GK+DAW AA GTGGT AG
Sbjct:    3 IKNGFVGTVGNTPLIRLNSFSEETGCEILAKAEFLNPGGSVKDRAALYIIEDAEAKGLLKPGGTVVEGTAGNTGIGLAHICNAKGYKCLIIIPETQSQEKMDALRALGAEVRPVPAVPYKDPNNYVKLSGRVASEMENAIWANQFDNLANRQAHYETTGPEIWTQTDGKVDAWTAATGTGGTFAG 187
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: UPI000378474F (cysteine synthase A n=1 Tax=Spirulina subsalsa TaxID=54311 RepID=UPI000378474F)

HSP 1 Score: 283 bits (725), Expect = 4.550e-93
Identity = 141/185 (76.22%), Postives = 158/185 (85.41%), Query Frame = 1 
Query:   52 IVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            I +GF G VGNTPL+RL S SD+TGCEIL KAE++NPGGSVKDRAA Y+I DAEK+G+LKPGGTVVEGTAGNTGIGLAH+C AKGYKC+I IPETQS+EKMD LR LGAEVRPVPAVPYKD  NY   + R A+EMENA+WA+QFDN AN+ AHYETTG EI  QT GK+DAWVAA GTGGT AG
Sbjct:    3 IKQGFVGTVGNTPLIRLNSFSDETGCEILGKAEFLNPGGSVKDRAALYIIEDAEKQGLLKPGGTVVEGTAGNTGIGLAHICNAKGYKCLIIIPETQSQEKMDLLRTLGAEVRPVPAVPYKDPNNYVKLSGRLAQEMENAIWANQFDNLANRNAHYETTGPEIWQQTEGKVDAWVAATGTGGTYAG 187
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: UPI0019DF0449 (Cysteine synthase A n=1 Tax=Geminocystis sp. M7585_C2015_104 TaxID=2774334 RepID=UPI0019DF0449)

HSP 1 Score: 283 bits (723), Expect = 1.010e-92
Identity = 139/185 (75.14%), Postives = 157/185 (84.86%), Query Frame = 1 
Query:   52 IVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            I  GFPG +GNTPL+R+ S S++TGCEIL KAE++NPGGSVKDRAA Y+I DAEKKG+LKPGGTVVEGTAGNTGIGLAH+C AKGYKC+I IPETQS+EK+D LR LGAEVR VPAVPY+D  NY   + R A EMENA+WA+QFDN AN+ AHYETTG EI AQT GKIDAWVAA GTGGT AG
Sbjct:    3 IKNGFPGTIGNTPLIRINSFSEETGCEILGKAEFLNPGGSVKDRAALYIIQDAEKKGLLKPGGTVVEGTAGNTGIGLAHICNAKGYKCLIIIPETQSQEKIDLLRTLGAEVRTVPAVPYRDPNNYVKLSGRIAAEMENAIWANQFDNLANRQAHYETTGPEIWAQTDGKIDAWVAATGTGGTFAG 187
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: K9RGI6_9CYAN (Cysteine synthase n=9 Tax=Nostocales TaxID=1161 RepID=K9RGI6_9CYAN)

HSP 1 Score: 282 bits (722), Expect = 1.220e-92
Identity = 140/185 (75.68%), Postives = 155/185 (83.78%), Query Frame = 1 
Query:   52 IVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            I  GF G VGNTPL+RL S S++TGCEIL KAE++NPGGSVKDRAA Y+I DAE KG+LKPGGTVVEGTAGNTGIGLAH+C AKGYKC+I IPETQS+EKMDALR LGAEVRPVPAVPYKD  NY   + R A EMENA+WA+QFDN AN+ AHYETTG EI  QT GK+D WVAA GTGGT AG
Sbjct:    3 IKNGFVGTVGNTPLIRLNSFSEETGCEILGKAEFLNPGGSVKDRAALYIIEDAEAKGLLKPGGTVVEGTAGNTGIGLAHICNAKGYKCLIIIPETQSQEKMDALRALGAEVRPVPAVPYKDPNNYVKLSGRVASEMENAIWANQFDNLANRQAHYETTGPEIWKQTDGKVDGWVAATGTGGTFAG 187
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Match: B4VZ03_9CYAN (Pyridoxal-phosphate dependent enzyme superfamily n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VZ03_9CYAN)

HSP 1 Score: 282 bits (722), Expect = 1.260e-92
Identity = 140/185 (75.68%), Postives = 157/185 (84.86%), Query Frame = 1 
Query:   52 IVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTLAG 606
            I  GF G VGNTPL+RL S S++TGCEIL KAE++NPGGSVKDRAA Y+I DAE KG+LKPGGTVVEGTAGNTGIGLAH+C AKGYKC+I IPETQS+EKMDALR LGAEVRPVPAVPYK+  NY   + R A+EMENA+WA+QFDN AN+ AHYETTG EI  QT GK+DAWVAA GTGGT AG
Sbjct:    3 IKEGFVGTVGNTPLIRLNSFSEETGCEILGKAEFLNPGGSVKDRAALYIIQDAEDKGLLKPGGTVVEGTAGNTGIGLAHICNAKGYKCLIIIPETQSQEKMDALRTLGAEVRPVPAVPYKNPNNYVKLSGRTAKEMENAIWANQFDNLANRQAHYETTGPEIWQQTDGKVDAWVAATGTGGTFAG 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14153.3231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G728_ECTSI1.440e-13698.51Cysteine synthase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JN69_9PHAE4.110e-10398.68PALP domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI000B49F7A61.060e-9376.76cysteine synthase A n=1 Tax=Calothrix rhizosolenia... [more]
A0A1J1LFC7_9CYAN1.160e-9376.22Cysteine synthase (O-acetylserine sulfhydrylase) (... [more]
A0A6P0QL18_9CYAN1.500e-9376.92Cysteine synthase A n=2 Tax=unclassified Microcole... [more]
A0A1Z4LL21_9CYAN2.120e-9376.22Pyridoxal-5'-phosphate-dependent enzyme, beta subu... [more]
UPI000378474F4.550e-9376.22cysteine synthase A n=1 Tax=Spirulina subsalsa Tax... [more]
UPI0019DF04491.010e-9275.14Cysteine synthase A n=1 Tax=Geminocystis sp. M7585... [more]
K9RGI6_9CYAN1.220e-9275.68Cysteine synthase n=9 Tax=Nostocales TaxID=1161 Re... [more]
B4VZ03_9CYAN1.260e-9275.68Pyridoxal-phosphate dependent enzyme superfamily n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14153contigEcto-sp13_S_contig14153:349..2744 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score394.8
Seed ortholog evalue2.4e-107
Seed eggNOG ortholog2880.D7G728
Model size606
KEGG rclassRC00020,RC02814,RC02821
KEGG koko:K01738
KEGG ReactionR00897,R03601,R04859
KEGG Pathwayko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00021
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons4
EggNOG free text desc.cysteine synthase activity
EggNOG OGsCOG0031@1,KOG1481@2759
Ec32 ortholog descriptionCysteine synthase
Ec32 orthologEc-01_011260.1
EC2.5.1.47
Cds size606
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462756.250949-CDS-Ecto-sp13_S_contig14153:348..4881681462756.250949-CDS-Ecto-sp13_S_contig14153:348..488Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14153 349..488 -
1681462756.2701657-CDS-Ecto-sp13_S_contig14153:1294..13951681462756.2701657-CDS-Ecto-sp13_S_contig14153:1294..1395Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14153 1295..1395 -
1681462756.2816133-CDS-Ecto-sp13_S_contig14153:1672..19571681462756.2816133-CDS-Ecto-sp13_S_contig14153:1672..1957Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14153 1673..1957 -
1681462756.2898993-CDS-Ecto-sp13_S_contig14153:2664..27441681462756.2898993-CDS-Ecto-sp13_S_contig14153:2664..2744Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14153 2665..2744 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14153.3231.1prot_Ecto-sp13_S_contig14153.3231.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14153 349..2744 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14153.3231.1

>prot_Ecto-sp13_S_contig14153.3231.1 ID=prot_Ecto-sp13_S_contig14153.3231.1|Name=mRNA_Ecto-sp13_S_contig14153.3231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
MAASTATAGAAAGVSVGIVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAE
WMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRA
KGYKCVIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCA
EEMENAVWADQFDNPANQLAHYETTGSEILAQTGGKIDAWVAAVGTGGTL
AG
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mRNA from alignment at Ecto-sp13_S_contig14153:349..2744-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14153.3231.1 ID=mRNA_Ecto-sp13_S_contig14153.3231.1|Name=mRNA_Ecto-sp13_S_contig14153.3231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14153:349..2744- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCGCCTCCACCGCCACCGCCGGTGCCGCTGCCGGGGTCTCGGTGGG
CATCGTACGGGGCTTTCCCGGGGCTGTAGGGTGAGTCGAAGCAACAGACA
CAGCGTTCTGCGACTGCTGTTTCGTGTCAAATGTGGAGATCACGCATTGG
TGAACACATGTGTAAAATGATTTAAAATGATTGTCTGGCCGGTAGGTATT
TGTCCGCACTTCGGACAGCAGGCTTGTCGTCCAGGAGTGCACAGCAATAC
ATGCTACACAGGCATGGCACACGGCATTTTCTTGCGGTGCGGCTGTGTGT
TTGTGCGAGCGGTTGGTGGCGGCAAGCTGTAACCTGTGTTGACTTGGAAG
ACGTCCCGAGACGACGTCACTAGTTAAAGTACCGTATTTTCTGCAACAGC
TCGTTGTTTGCTTGTGCAGCGCTGTTCAGAGTTGGGAGAGATGGCACCGC
GTGCGATGATTGTTTAAACTTCTTTTTTGTTCGTGTTTTGTGTCGCACCC
CGCTGCGATTTCTCCGACCGGTGCGATCTCCCAGACTCTTACGGTTGGCA
GGAAGTCCAGTAGCGTAGCGTAGCGAGCGGAATGTTATTGTTAGCCTTTC
GAGAACGTGGCGCCGAGTGCGAGATTGTCGACGCCCATGCACACTTCTGA
CAAGTCGAAGCTCAACCCCGTTGCCATTGCTGTGTCTTCCCCTCTTACTT
CCCCCGTAACAACACCAGTATTTCTCCTTGTCCGTCTCCTCCTTTCGTCG
CTCTGCCTCCATTACCCCCCTAAACACCACCGGACAGCAACACCCCGCTG
GTTCGGCTCGGCAGCCTCAGCGACAAAACGGGGTGCGAGATACTGGCCAA
GGCCGAGTGGATGAACCCGGGGGGCTCCGTGAAAGACCGCGCCGCCAAGT
ACCTCATCATGGACGCCGAGAAGAAGGGGGTTCTCAAGCCGGGAGGCACC
GTGGTGGAAGGGACGGCGGGTAACACCGGCATCGGATTGGCCCACATGTG
CCGCGCTAAGGGCTACAAGTGTGTGATTTACATCCCCGAGACGCAGAGCA
AGGAGAAGATGGACGCCCTGAGGTAACAGCAGCAGCTGTTGCTGGGGCGC
GAGATCTCGTTAGTTTTAGTAACGCAAAGAACAAGGGGCCGCGCGCTCTC
TCTTTTCTCTCTTGCAGTGCTCGTCCTCCCTCTTCGAAACGTGACTGCCT
GCCGTTGATGGCTCCGATTTGATTTTTCTCAAAGTCCCGTTGTCTCGAAC
GGCCCGCCGTCTGTTGATATGCCCGTTTCCGATTGGTCCGCTGTCTTGAT
GCCCTCCACATCTGTTGATGCGAATGGCCTTGATTGGTCGGGCGAATAGG
GGCCTCGGGGCAGAGGTGAGGCCGGTGCCGGCGGTGCCGTACAAGGACGA
GATGAACTACAACCACCAGGCGAAGCGCTGCGCCGAGGAAATGGAGAACG
GTAAGTGTTTCTTTCGTATTGTTTCTACTCTAGAGCCTTGTTTGTTAGTG
GATGCTGGGCCAGCAAACCAGGTGCAAAATGTATACACTCAGACGAGTAT
CGAGAGCGAAGTAACATGTTATTCCGGAATCGACCGCTTTTTTGTGGACC
CTAGCGATGGGACTTTGAGGTGTTAGCGTTCATGTTTTTGTTAATGGTTT
TATTGATCCCCTTACCCCACCGACAAGGGTTTGTAGATATAGCAGAGGCG
ACAATCTGCGCCAAGTCTTCGTGTGGGAAGTGGCGCACGGTATCCTTTGA
ATCCCGTAGGGGGGGAAAGGACCCAAGTTGTTGCTCCTGCTTGTCGCAAG
CGGCTAGTTTTTGTGTTTCGCTGAGCTCCACGCATCTTCTCGTGCCCATG
ATCAGGTGATATGTACACAGCCGCCATGTTTTTTTCGTTTTTTGTCATCA
TCTCGAGTCTCGTGTGCGTGTTGTTTCTCGTCTTTGATCTTGTTGTTGAG
ATCTACACCTGGTTCTTCGTTATCGGCGAATAGTACTCCACCTAGCCTGG
TTGTATCGGCGGCACATACAACCATGTAGGCATGCTCCATCATGGAATCT
CAACACCCTCTCCTGTAGCCAACTCAAATCCAACCGGGCACATTATGGTC
CCAAGTAACTCCGTTCGTCTAGTCCGTCGCCCCCCTCGATCCTCGCAAAC
ACTTTCCGGATTTTTCGTCAAACGTCGTTTCATCCAATCCCTTCCGGTCT
CTGTGCATTCCTGTCGCCCCCCATAAAATGCCGGTTCATCCATCCCATCC
CATCAGCTGTGTGGGCCGATCAGTTCGATAACCCGGCCAACCAGCTCGCT
CATTACGAAACCACCGGGTCGGAAATTCTGGCGCAAACGGGCGGGAAGAT
TGACGCCTGGGTGGCGGCTGTCGGCACCGGTGGGACTCTGGCAGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14153:349..2744-

>mRNA_Ecto-sp13_S_contig14153.3231.1 ID=mRNA_Ecto-sp13_S_contig14153.3231.1|Name=mRNA_Ecto-sp13_S_contig14153.3231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14153:349..2744- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCGCCTCCACCGCCACCGCCGGTGCCGCTGCCGGGGTCTCGGTGGG
CATCGTACGGGGCTTTCCCGGGGCTGTAGGCAACACCCCGCTGGTTCGGC
TCGGCAGCCTCAGCGACAAAACGGGGTGCGAGATACTGGCCAAGGCCGAG
TGGATGAACCCGGGGGGCTCCGTGAAAGACCGCGCCGCCAAGTACCTCAT
CATGGACGCCGAGAAGAAGGGGGTTCTCAAGCCGGGAGGCACCGTGGTGG
AAGGGACGGCGGGTAACACCGGCATCGGATTGGCCCACATGTGCCGCGCT
AAGGGCTACAAGTGTGTGATTTACATCCCCGAGACGCAGAGCAAGGAGAA
GATGGACGCCCTGAGGGGCCTCGGGGCAGAGGTGAGGCCGGTGCCGGCGG
TGCCGTACAAGGACGAGATGAACTACAACCACCAGGCGAAGCGCTGCGCC
GAGGAAATGGAGAACGCTGTGTGGGCCGATCAGTTCGATAACCCGGCCAA
CCAGCTCGCTCATTACGAAACCACCGGGTCGGAAATTCTGGCGCAAACGG
GCGGGAAGATTGACGCCTGGGTGGCGGCTGTCGGCACCGGTGGGACTCTG
GCAGGT
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