prot_Ecto-sp13_S_contig141.3200.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig141.3200.1
Unique Nameprot_Ecto-sp13_S_contig141.3200.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length388
Homology
BLAST of mRNA_Ecto-sp13_S_contig141.3200.1 vs. uniprot
Match: D8LET4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LET4_ECTSI)

HSP 1 Score: 722 bits (1863), Expect = 3.790e-262
Identity = 371/387 (95.87%), Postives = 376/387 (97.16%), Query Frame = 0
Query:    1 MSSGYGDNRLLGLDPFGRYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTIDGQDWSGDSDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWTMVSLFCSSFSLFTFAVSVAYTGFLSAKESFDFIPSEYGASTSENRSVASMIAIAYVAYAMNNFFALVHLNYKMFMYQSDQWVGFNRGFYKMALMFVGLLTLLAGTVQLALGAYVFDKVDEDRLSSPLGAIFLSGPLLVTYSRLAMAFGAFQLVLGCYIMFRATQASPRKPSSGSGENAKGLQAFQFVAWFVLVLSICIQVLSQVTMSSTSTNNVDGHAGFAAQAVAYVVGLGLFPMYLDAMYYTTPETIDQNDFCGDVSAWSKGKGDIEERKVESASVEAQAVATPNA 387
            MSSGYGDNRLLGLDPFGRYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTIDGQDWSG+SDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWTM+SLFCS FSLFTFAVSVAYTGFLSAKESFDFIPSEYGASTSENRSVASMIAIAYVAYA+NNFFALVHLNYKMFMYQSDQWVGFNRGFYK ALMFVGLLTLLAGTVQLALGAYVFDKVDEDRLSSPLGAIFLSGPLLVTYSRLA+AFGAFQLVLGCYIM RATQ    KPSSGSGENAKGLQAFQF AWFVLVLSICIQVLSQVTMSSTSTN VD +AGFAAQAVAYVVGLGLFPMYLDAMYYTTPETIDQNDFCGDVSAWSKGKGDIEERKVESASVEAQAVA PNA
Sbjct:    1 MSSGYGDNRLLGLDPFGRYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTIDGQDWSGNSDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWTMISLFCSFFSLFTFAVSVAYTGFLSAKESFDFIPSEYGASTSENRSVASMIAIAYVAYAINNFFALVHLNYKMFMYQSDQWVGFNRGFYKTALMFVGLLTLLAGTVQLALGAYVFDKVDEDRLSSPLGAIFLSGPLLVTYSRLAIAFGAFQLVLGCYIMVRATQ----KPSSGSGENAKGLQAFQFAAWFVLVLSICIQVLSQVTMSSTSTNIVDRYAGFAAQAVAYVVGLGLFPMYLDAMYYTTPETIDQNDFCGDVSAWSKGKGDIEERKVESASVEAQAVAAPNA 383          
BLAST of mRNA_Ecto-sp13_S_contig141.3200.1 vs. uniprot
Match: A0A836CMW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW6_9STRA)

HSP 1 Score: 143 bits (361), Expect = 7.490e-36
Identity = 106/333 (31.83%), Postives = 161/333 (48.35%), Query Frame = 0
Query:   18 RYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTIDGQDWSGDSDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWT---MVSLFCSSFSLFTFAVSVAYTGFLSAKESFDFIPSEYGASTSENRSVASMIAIAYVAYAMNNFFALVHLNYKMFMYQSDQWV-GFNRGFYKMALMFVGLLTLLAGTVQLALGAYVFDKVDEDRLSSPLGAIFLSGPLLVTYSRLAMAFGAFQLVLGCYIMFRATQASPRKPSSGSGENAKGLQAFQFVAWFVLVLSICIQVLSQVTMSSTSTNNVDGHAGFAAQAVAYVVGLGLFPMYLDAMYYTTPE 346
            RY  E+  TAG+  LFG + ++     +   T  GQ W+G+S  FPP+   LA L Q  F + ++ VG  +LV G     W+   MV  + + F   T    +++TG    +    FIP     +T++  +V ++ A+ ++AY  N   AL     K+F   S   V  +   +Y     + G LTLLAG VQLALGAYV D    DRL  P+ A    GP  VTYS+ ++A G   +  G  +M R+  +   K ++G+        AF + + F  V  + +QVL+QV ++          A   A  V   + L +FP+YLD    + PE
Sbjct:    7 RYLCEVRQTAGLAILFGSMAVLSACIGISEVTDIGQKWAGNSLTFPPIALLLANLTQALFGLSNIGVGLAWLVSGKGSVGWSFFSMVITYAAWFPFLTVISLISFTGDNYPQAPQPFIPMTLMPTTTDVNAVTALAALGFIAYGANLVGALTFCATKLFRAHSVAGVTAYTGAYYASRQTYYGFLTLLAGVVQLALGAYVQDNFGSDRLLEPIAA----GPFTVTYSQASIAMGVLVMFQGALLMARSYMSKDSKVATGA--------AFDWWSVFAYVTVLAVQVLTQVAVAPAP-------AAGRASTVFETLALAVFPVYLDIKSRSAPE 320          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig141.3200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LET4_ECTSI3.790e-26295.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CMW6_9STRA7.490e-3631.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 260..279
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 301..319
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 280..300
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 338..387
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 320..337
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..91
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 237..259
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 148..170
NoneNo IPR availableTMHMMTMhelixcoord: 286..305
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 315..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig141contigEcto-sp13_S_contig141:593..7210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig141.3200.1mRNA_Ecto-sp13_S_contig141.3200.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig141 2..7300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig141.3200.1 ID=prot_Ecto-sp13_S_contig141.3200.1|Name=mRNA_Ecto-sp13_S_contig141.3200.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp
MSSGYGDNRLLGLDPFGRYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTI
DGQDWSGDSDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWTM
VSLFCSSFSLFTFAVSVAYTGFLSAKESFDFIPSEYGASTSENRSVASMI
AIAYVAYAMNNFFALVHLNYKMFMYQSDQWVGFNRGFYKMALMFVGLLTL
LAGTVQLALGAYVFDKVDEDRLSSPLGAIFLSGPLLVTYSRLAMAFGAFQ
LVLGCYIMFRATQASPRKPSSGSGENAKGLQAFQFVAWFVLVLSICIQVL
SQVTMSSTSTNNVDGHAGFAAQAVAYVVGLGLFPMYLDAMYYTTPETIDQ
NDFCGDVSAWSKGKGDIEERKVESASVEAQAVATPNA*
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