prot_Ecto-sp13_S_contig14074.3183.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14074.3183.1
Unique Nameprot_Ecto-sp13_S_contig14074.3183.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length478
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14074.3183.1 vs. uniprot
Match: D8LH88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH88_ECTSI)

HSP 1 Score: 499 bits (1286), Expect = 2.740e-168
Identity = 423/477 (88.68%), Postives = 437/477 (91.61%), Query Frame = 0 
Query:    1 MGLVNKEEASSYYEALSDLERTTQEAKAXXXXXXXXXXSAARSSSASPFSPQEGPLSLVPFPAVCAALGAAGTQSLHLAGALGTACSVFGAVAGVALGGLVVIGDDPLGRAARAAGLALARSAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVAALPGAVVAKAADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVSSPGKTLTALASGASSLVAQQVEGSKKKARPAASAASTEKAPQASTAATSMEEKQEPEGIPIDELEAKMSSVRKALERFDTVKSRIEEANTSDTMRKTVSMTRGMDMSAEREKNEEARAAAKRPNEAQVNGNKESTSARPGGELPSVASTTTPKSPKPKPMNQERRKQVTEKLLEKASXXXXXXXXGLKAAAASSRREAENTQAASPTATPIAGADKKTPQETVATH 477
            +GLV+KEEAS+YYEALSDLERTTQEAKAXXXXXXXXXX      SASPFSPQEGPLSLVPFPAVCAALGAAGT SLHLAGALGTA SVFGAVAGVALGGLVVIGDDPLGRAARAAGLALARSAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SV ALPGAV  KAADG           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DAVSSPGKTLTALASGASSLVAQQ+E SKKKARPAA AAST+KAPQASTAA S+EEKQEPEGIPIDELEAKMSSVRKALERFDTVKSRIEEANTSDTMRKTVSMTRGMDMSAEREKNEEARAAA+RPNEA+VNGNK+STSARPGGE+PSVASTTT ++PKPK M+Q+RRKQV EKLLEKAS        GLKAAAASSRREAENTQAASPTATPI GADKKTPQETVATH
Sbjct:  219 IGLVDKEEASTYYEALSDLERTTQEAKAXXXXXXXXXXXXXXXXSASPFSPQEGPLSLVPFPAVCAALGAAGTHSLHLAGALGTAFSVFGAVAGVALGGLVVIGDDPLGRAARAAGLALARSAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTALPGAVATKAADGARGALQDTSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDAVSSPGKTLTALASGASSLVAQQIESSKKKARPAAPAASTKKAPQASTAAASVEEKQEPEGIPIDELEAKMSSVRKALERFDTVKSRIEEANTSDTMRKTVSMTRGMDMSAEREKNEEARAAAERPNEARVNGNKKSTSARPGGEMPSVASTTTTRAPKPKTMDQDRRKQVAEKLLEKASQRATEAKAGLKAAAASSRREAENTQAASPTATPIGGADKKTPQETVATH 695
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14074.3183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH88_ECTSI2.740e-16888.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 312..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14074contigEcto-sp13_S_contig14074:1347..3853 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14074.3183.1mRNA_Ecto-sp13_S_contig14074.3183.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14074 493..4522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14074.3183.1 ID=prot_Ecto-sp13_S_contig14074.3183.1|Name=mRNA_Ecto-sp13_S_contig14074.3183.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=478bp
MGLVNKEEASSYYEALSDLERTTQEAKAAAAAAAESQPSAARSSSASPFS
PQEGPLSLVPFPAVCAALGAAGTQSLHLAGALGTACSVFGAVAGVALGGL
VVIGDDPLGRAARAAGLALARSAGAAGGAAGKSVSESAAGAAGAAVGAVE
EAVVKAPANFVAGVASSISSAVSSAVGSVAALPGAVVAKAADGAKGALQD
TSEAVVNLPGEVARKAAQAAGGALQSTSDAAVTAVRESPKMAAKRLNDAV
SSPGKTLTALASGASSLVAQQVEGSKKKARPAASAASTEKAPQASTAATS
MEEKQEPEGIPIDELEAKMSSVRKALERFDTVKSRIEEANTSDTMRKTVS
MTRGMDMSAEREKNEEARAAAKRPNEAQVNGNKESTSARPGGELPSVAST
TTPKSPKPKPMNQERRKQVTEKLLEKASQRAAEAKAGLKAAAASSRREAE
NTQAASPTATPIAGADKKTPQETVATH*
back to top