prot_Ecto-sp13_S_contig14057.3164.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14057.3164.1
Unique Nameprot_Ecto-sp13_S_contig14057.3164.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
BLAST of mRNA_Ecto-sp13_S_contig14057.3164.1 vs. uniprot
Match: D7G2B2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B2_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 1.960e-36
Identity = 83/87 (95.40%), Postives = 86/87 (98.85%), Query Frame = 0
Query:   44 EGGGCAYSNCADGPSCPGGSCSFQSCRGXXXXXXXXXXXXXXXXXXXXXXXRVVDPLTTLRDGYCDGGACKVNGKPFPSRFAGKLSV 130
            +GGGC YSNCADGPSCPGGSCSFQ+CRGXXXXXXXXXXXXXXXXXXXXXXXRVVDPL+TLRDGYCDGGACKVNGKPFPSRFAGKLSV
Sbjct:    5 QGGGCGYSNCADGPSCPGGSCSFQNCRGXXXXXXXXXXXXXXXXXXXXXXXRVVDPLSTLRDGYCDGGACKVNGKPFPSRFAGKLSV 91          
BLAST of mRNA_Ecto-sp13_S_contig14057.3164.1 vs. uniprot
Match: A0A6U4L0H7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L0H7_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.050e-15
Identity = 61/117 (52.14%), Postives = 77/117 (65.81%), Query Frame = 0
Query:   13 SLLVVSVAHVSQILVGAAAATGRPVPCDFVCEGGGCAYSNCADGPSCPGGSCSFQSCRGXXXXXXXXXXXXXXXXXXXXXXXRVVDPLTTLRDGYCDGGACKVNGKPFPSRFAGKLS 129
            +LLV   A +  ++  A     + + CD  C  G C Y NC +GP+CPGG C+F +C    XXXXXXXXXXXXXXXXXXXXX++ +P T L+DGYC G  C VNGK +P RF+  LS
Sbjct:   80 ALLVWGAALLLGLIAPAQGGKLKEMDCDKPCTMGSCNYENCVNGPACPGGLCTFTNCVDPSXXXXXXXXXXXXXXXXXXXXXKIENPQTVLKDGYCRGTKCTVNGKAWPHRFSDTLS 196          
BLAST of mRNA_Ecto-sp13_S_contig14057.3164.1 vs. uniprot
Match: A0A6A3RHA1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RHA1_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.490e-8
Identity = 53/95 (55.79%), Postives = 59/95 (62.11%), Query Frame = 0
Query:   36 PVPCDFV-CEGGGCAYSNCADGPSCPGGSCSFQSCRGXXXXXXXXXXXXXXXXXXXXXXXRVVDPLTTLRDGYCDGGACKVNGKPFPSRFAGKLS 129
            P  CD   C  GGC + NCA   SC GG C F+ C+   XXXXXXXXXXXXXXXXXXXXXR V    TLRDGYC    C + G   PS  +G L+
Sbjct:   36 PTSCDTENCVAGGCLFENCASPLSCKGGLCYFRKCKTAVXXXXXXXXXXXXXXXXXXXXXRFVHVPKTLRDGYCXXXXCTLEGDSHPSSLSGSLA 130          
BLAST of mRNA_Ecto-sp13_S_contig14057.3164.1 vs. uniprot
Match: A0A6G0XPZ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPZ3_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 5.000e-6
Identity = 50/95 (52.63%), Postives = 58/95 (61.05%), Query Frame = 0
Query:   36 PVPCDFV-CEGGGCAYSNCADGPSCPGGSCSFQSCRGXXXXXXXXXXXXXXXXXXXXXXXRVVDPLTTLRDGYCDGGACKVNGKPFPSRFAGKLS 129
            P  C  + C+ GGC Y  C +   C GG C F  C    XXXXXXXXXXXXXXXXXXXXX    P  +L++ YC GG C V+GK  PS F+  LS
Sbjct:   33 PTNCSVLDCKHGGCLYRGCKERIECSGGHCEFIDCVDPHXXXXXXXXXXXXXXXXXXXXXXXXKPTRSLKEDYCLGGLCTVDGKEHPSSFSTSLS 127          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14057.3164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G2B2_ECTSI1.960e-3695.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U4L0H7_9STRA5.050e-1552.14Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6A3RHA1_9STRA6.490e-855.79Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A6G0XPZ3_9STRA5.000e-652.63Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..130
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.636

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14057contigEcto-sp13_S_contig14057:1098..2354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14057.3164.1mRNA_Ecto-sp13_S_contig14057.3164.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14057 1081..2365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14057.3164.1 ID=prot_Ecto-sp13_S_contig14057.3164.1|Name=mRNA_Ecto-sp13_S_contig14057.3164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
MEIAWPRWKAYASLLVVSVAHVSQILVGAAAATGRPVPCDFVCEGGGCAY
SNCADGPSCPGGSCSFQSCRGPSCKGGNCDFISCHSPACGGGGCRVVDPL
TTLRDGYCDGGACKVNGKPFPSRFAGKLSV*
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