mRNA_Ecto-sp13_S_contig14006.3130.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14006.3130.1
Unique NamemRNA_Ecto-sp13_S_contig14006.3130.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: A0A6H5KKJ6_9PHAE (SMK-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ6_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 4.630e-115
Identity = 205/209 (98.09%), Postives = 207/209 (99.04%), Query Frame = 1 
Query:    1 MGANGEAARGSTKGGKGDGKAGGFRQGXXXXXXXXXXXXXXXXXGGDARSKMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQNIDLRENRDRDFG 627
            MGANGE ARGS+KGGKGDGKAGGFRQGXXXXXXXXXXXXXXXXX GDARSKMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNL+NSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQNIDLRENRDRDFG
Sbjct:  536 MGANGEVARGSSKGGKGDGKAGGFRQGXXXXXXXXXXXXXXXXXXGDARSKMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLINSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQNIDLRENRDRDFG 744
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: D7FI53_ECTSI (SMK-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI53_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 5.350e-81
Identity = 143/156 (91.67%), Postives = 145/156 (92.95%), Query Frame = 1 
Query:    1 MGANGEAARGSTKGGKGDGKAGGFRQGXXXXXXXXXXXXXXXXXGGDARSKMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVE 468
            MGANGE ARGS+KGGKGDGKAGGFRQG         XXXXXXX GGDARSKMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNL+NSAVIELVE
Sbjct:  464 MGANGEVARGSSKGGKGDGKAGGFRQGGVGSDSSSSXXXXXXXGGGDARSKMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLINSAVIELVE 619
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: A0A7S2RPQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPQ1_9STRA)

HSP 1 Score: 199 bits (507), Expect = 3.070e-59
Identity = 89/144 (61.81%), Postives = 123/144 (85.42%), Query Frame = 1 
Query:  172 SRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQNIDLR 603
            S GHICD+LS+CV+SHT+RMKYFVLRNN+V R+L LL   DK+L+L+A+RF+R C+G KDEFYNRY+VK+NLLAPVF LF  N+GRDNLV+SA+I++++F+RTEN+KSLVE+ VE F++ F +V+   T + + L++EQN++LR
Sbjct:   96 SFGHICDILSYCVKSHTYRMKYFVLRNNLVGRILELLHQRDKFLKLAALRFVRQCIGAKDEFYNRYIVKHNLLAPVFTLFAANQGRDNLVSSAIIDMIDFVRTENIKSLVEYSVENFATYFEDVEYVETFKNLHLRYEQNLELR 239
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: A0A836CNG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG3_9STRA)

HSP 1 Score: 191 bits (486), Expect = 5.460e-58
Identity = 87/127 (68.50%), Postives = 111/127 (87.40%), Query Frame = 1 
Query:  181 HICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTL 561
            H+CDLLS+CVRSHT+RMKYFVLRN++V+RVLRL  C DK+LQL+AVRFLR+CVGIKD+FYNRY+VKNNLLAPVFAL  +N  +DNL+ SA++EL+EF+R+ENVKSL+E++VERF S F ++     L
Sbjct:   98 HLCDLLSYCVRSHTYRMKYFVLRNHIVARVLRLARCRDKFLQLAAVRFLRACVGIKDDFYNRYIVKNNLLAPVFALLAQNAAKDNLITSAIMELLEFLRSENVKSLIEYIVERFESEFGQLGHAPVL 224
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: A0A7S3USX4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USX4_HETAK)

HSP 1 Score: 189 bits (479), Expect = 2.710e-57
Identity = 86/149 (57.72%), Postives = 120/149 (80.54%), Query Frame = 1 
Query:  166 QVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQNIDLRENR 612
            +++ GH  DLL+FCVR HT+RMKYFVLRNN+V+RVLRLL   DK+L+L+AVRF+R+CVGIKD+FYNRYLVKNNLLAPV  +F++ + +D L+NS +IE+VEFIR+EN+K L+E++ E++  +F +V        +KLK++QN D  EN+
Sbjct:   12 RLALGHATDLLAFCVRQHTYRMKYFVLRNNIVARVLRLLRYRDKFLKLAAVRFIRACVGIKDDFYNRYLVKNNLLAPVLDMFKDQKQQDTLINSTIIEMVEFIRSENIKILIENIHEKYEGAFHDVTYVTVFTDLKLKYDQNRDFSENK 160
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: A0A7S2D4C1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4C1_9STRA)

HSP 1 Score: 174 bits (442), Expect = 5.440e-47
Identity = 77/141 (54.61%), Postives = 112/141 (79.43%), Query Frame = 1 
Query:  175 RGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQNID 597
            +G++CDLLS CVR+HT+RMKYFVL N +V R+L L   +DK+L+L+A+RF+RS +G+KD+FYNRYLVKN LLAP+F L +    +D L+ SA++++ + IRTEN+K+LVEH+VE++S SF +V+   T + + LKHEQN +
Sbjct:  546 QGYVCDLLSSCVRTHTYRMKYFVLGNRIVGRILSLADTDDKFLKLAAIRFVRSIIGVKDDFYNRYLVKNGLLAPLFVLLKTVAHKDCLLTSAIVDMADHIRTENIKALVEHIVEKYSDSFDQVEHVDTFKNLVLKHEQNTE 686
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: A0A061R721_9CHLO (Protein phosphatase 4 regulatory subunit 3 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R721_9CHLO)

HSP 1 Score: 171 bits (434), Expect = 6.750e-46
Identity = 80/157 (50.96%), Postives = 119/157 (75.80%), Query Frame = 1 
Query:  136 GDARSKMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVEFIRTENVKSLVEHVVER-FSSSFVEVDQTGTLEGIKLKHEQNIDLR 603
            G   S+ +    + G I +LL FCV++H++R+KY++LRNNVV +VLRLL C+ K+L ++AVRFLR+C+G+KDEFYNRYLV+NNLL PV   F EN  R NL+NSA++ELVEFIR EN++ L+ H+VE+ ++ +  ++D   T + +K+K+EQ+ + R
Sbjct:  487 GSGSSESQPSPATLGTIVELLCFCVQNHSYRIKYYILRNNVVEKVLRLLKCSQKWLVVAAVRFLRTCIGVKDEFYNRYLVRNNLLEPVVKAFIENGSRYNLLNSAILELVEFIRKENIQGLISHLVEQCYNEALEDIDYVDTFKQLKIKYEQSQERR 643
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: I0Z6D1_COCSC (DUF625-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z6D1_COCSC)

HSP 1 Score: 165 bits (417), Expect = 4.440e-44
Identity = 76/136 (55.88%), Postives = 104/136 (76.47%), Query Frame = 1 
Query:  184 ICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQN 591
            I DLL FCV+ H++R+KY+VLRNNVV +VL+LL+  +K+L ++AVRFLR+C+G+KD+FYNRYLV+NNL  PV A F  N  R NL+NSAV+E+VE++R EN+K L+ H+VE+F       D   T   +KLK+EQN
Sbjct:  367 IVDLLCFCVQQHSYRIKYYVLRNNVVEKVLKLLNRREKWLVVAAVRFLRTCIGLKDDFYNRYLVRNNLFEPVLATFLANGERYNLLNSAVLEMVEYVRKENIKPLISHLVEQFGGRLAGCDYVDTFRNLKLKYEQN 502
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: A0A8J9WTB7_9CHLO (Serine/threonine-protein phosphatase 4 regulatory subunit n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WTB7_9CHLO)

HSP 1 Score: 164 bits (414), Expect = 3.370e-43
Identity = 77/136 (56.62%), Postives = 103/136 (75.74%), Query Frame = 1 
Query:  184 ICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQN 591
            I DLL FCV+ H++R+KY+VLRNNVV +VL+LL+  +K+L ++AVRFLR+C+G+KD+FYNRYLV+NNL  PV A F  N  R NL+NSAV+E+VEFIR EN+K LV H+VE++           T   +KLK+EQN
Sbjct:  502 IVDLLCFCVQQHSYRIKYYVLRNNVVEKVLKLLNRREKWLVVAAVRFLRTCIGLKDDFYNRYLVRNNLFEPVLAAFLANGERYNLLNSAVLEMVEFIRKENIKPLVSHLVEQYGQRLASCTYVDTFRNLKLKYEQN 637
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BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Match: A0A2R6WPW7_MARPO (SMK-1 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WPW7_MARPO)

HSP 1 Score: 164 bits (415), Expect = 3.740e-43
Identity = 79/149 (53.02%), Postives = 108/149 (72.48%), Query Frame = 1 
Query:  184 ICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKYLQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSAVIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQNIDLRENRDRDFGG 630
            ICDL+ FCV+ H FR+KY+V+RNNVV ++LRL    +KYL ++AVRFLR+C+ +KDEFYNRYLVKNNL   V   F  N  R NL+NSAV+EL++FIR EN+  L+ H+VE FS     VD   T++ +KLK+EQ+++   +  R+ GG
Sbjct:  517 ICDLMCFCVQHHRFRIKYYVMRNNVVEKILRLTRRKEKYLVVAAVRFLRTCIALKDEFYNRYLVKNNLFQSVIQAFLANGNRYNLLNSAVLELIDFIRKENITILILHLVENFSEKLECVDYVETIQALKLKYEQSLEGVSSITREAGG 665
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14006.3130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKJ6_9PHAE4.630e-11598.09SMK-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FI53_ECTSI5.350e-8191.67SMK-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2RPQ1_9STRA3.070e-5961.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CNG3_9STRA5.460e-5868.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3USX4_HETAK2.710e-5757.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2D4C1_9STRA5.440e-4754.61Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A061R721_9CHLO6.750e-4650.96Protein phosphatase 4 regulatory subunit 3 n=2 Tax... [more]
I0Z6D1_COCSC4.440e-4455.88DUF625-domain-containing protein n=1 Tax=Coccomyxa... [more]
A0A8J9WTB7_9CHLO3.370e-4356.62Serine/threonine-protein phosphatase 4 regulatory ... [more]
A0A2R6WPW7_MARPO3.740e-4353.02SMK-1 domain-containing protein n=2 Tax=Marchantia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14006contigEcto-sp13_S_contig14006:1546..3705 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score262.3
Seed ortholog evalue1.9e-67
Seed eggNOG ortholog2880.D7FI53
Preferred nameSMEK2
Model size632
KEGG koko:K17491
KEGG Pathwayko04212,ko04922,map04212,map04922
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000228,GO:0000775,GO:0000785,GO:0000790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0005938,GO:0006109,GO:0006111,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0006950,GO:0006952,GO:0006974,GO:0007049,GO:0007063,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0007399,GO:0007405,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008287,GO:0008356,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010165,GO:0010212,GO:0010564,GO:0010604,GO:0010639,GO:0010646,GO:0010648,GO:0010675,GO:0010676,GO:0010906,GO:0010907,GO:0010921,GO:0010948,GO:0015630,GO:0016311,GO:0016604,GO:0016607,GO:0017145,GO:0019208,GO:0019211,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019888,GO:0022008,GO:0022402,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0030154,GO:0030234,GO:0030289,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033313,GO:0033554,GO:0034641,GO:0035303,GO:0035304,GO:0035556,GO:0036211,GO:0036445,GO:0040011,GO:0040020,GO:0042221,GO:0042330,GO:0042742,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043255,GO:0043327,GO:0043412,GO:0043666,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045165,GO:0045175,GO:0045722,GO:0045739,GO:0045786,GO:0045787,GO:0045835,GO:0045875,GO:0045913,GO:0045930,GO:0045931,GO:0045935,GO:0046483,GO:0048103,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051246,GO:0051301,GO:0051321,GO:0051336,GO:0051445,GO:0051447,GO:0051598,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0055057,GO:0055059,GO:0060255,GO:0061351,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071944,GO:0072089,GO:0072395,GO:0072411,GO:0072462,GO:0072542,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0098542,GO:0098687,GO:0098722,GO:0098772,GO:0099568,GO:1901360,GO:1901564,GO:1901976,GO:1901977,GO:1902494,GO:1902659,GO:1902660,GO:1903046,GO:1903293,GO:1904289,GO:1904290,GO:2000001,GO:2000002,GO:2000241,GO:2000242,GO:2000779,GO:2000781,GO:2001020,GO:2001021,GO:2001022,GO:2001032,GO:2001034,GO:2001251
Exons4
EggNOG free text desc.signal transduction involved in meiotic cell cycle checkpoint
EggNOG OGsKOG2175@1,KOG2175@2759
Cds size630
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462748.3799694-CDS-Ecto-sp13_S_contig14006:1545..17071681462748.3799694-CDS-Ecto-sp13_S_contig14006:1545..1707Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14006 1546..1707 -
1681462748.3913748-CDS-Ecto-sp13_S_contig14006:2273..23761681462748.3913748-CDS-Ecto-sp13_S_contig14006:2273..2376Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14006 2274..2376 -
1681462748.3997953-CDS-Ecto-sp13_S_contig14006:2802..29091681462748.3997953-CDS-Ecto-sp13_S_contig14006:2802..2909Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14006 2803..2909 -
1681462748.408951-CDS-Ecto-sp13_S_contig14006:3447..37051681462748.408951-CDS-Ecto-sp13_S_contig14006:3447..3705Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14006 3448..3705 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14006.3130.1prot_Ecto-sp13_S_contig14006.3130.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14006 1546..3705 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14006.3130.1

>prot_Ecto-sp13_S_contig14006.3130.1 ID=prot_Ecto-sp13_S_contig14006.3130.1|Name=mRNA_Ecto-sp13_S_contig14006.3130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MGANGEAARGSTKGGKGDGKAGGFRQGGGGSDSSSGGCAPGGSGGGDARS
KMRMLQVSRGHICDLLSFCVRSHTFRMKYFVLRNNVVSRVLRLLSCNDKY
LQLSAVRFLRSCVGIKDEFYNRYLVKNNLLAPVFALFRENRGRDNLVNSA
VIELVEFIRTENVKSLVEHVVERFSSSFVEVDQTGTLEGIKLKHEQNIDL
RENRDRDFGG
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mRNA from alignment at Ecto-sp13_S_contig14006:1546..3705-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14006.3130.1 ID=mRNA_Ecto-sp13_S_contig14006.3130.1|Name=mRNA_Ecto-sp13_S_contig14006.3130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2160bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14006:1546..3705- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAGCCAACGGCGAGGCCGCACGCGGTTCTACGAAGGGGGGAAAGGG
GGACGGCAAAGCGGGAGGGTTTCGGCAGGGTGGGGGGGGTAGCGATAGCA
GCAGTGGTGGATGTGCGCCAGGCGGTTCGGGGGGGGGTGACGCGAGATCG
AAGATGAGGATGCTGCAGGTGTCGCGGGGGCACATCTGCGACCTGCTCTC
GTTCTGCGTCCGAAGTCATACCTTCCGCATGAAGTACTTCGTGCTGAGGA
ATAATGTGGTGAGTTGAGTTGGTTGGAGTTTTTGTTTATTTCATCCATAT
GACCCAACGGCTCCATCTCTTTCTAAGAAAGAGTCTCAAGATATATTAAC
AATAAATTCATAGCGTCAGAGAACATTGTGCTCGAAACGAGCGAACGAGC
AGCACACGCAGCAGTTAGAAGTTGTGCTGTACGTGTGTTTAGGCTGGGTT
GCGATGTGCGTACCCACACGAGCGTGCTATATGCTCCACCATGTAGGTCA
GTCTTGTTTCTTGAGACTCAACCAGCTAAAATTTGCTGGTCTGGTCTACA
CTTGAACTCTAACAATCAATTGTAGTAGGAGGGGCACCGCGGGATAATCG
AAGGCGGCACCTTCGGCAGAAAAAAAGCTTCTGGGTGTCCCCGGGCTCTT
ATCAGAGAATGATTGAACTGGACAAGGCACCGCTCTGCCCTACGTAGATA
ATAATAGTAAGGTTGGAGAGTGGCAGGGTGCTGAGGAACCGGGATGGCGG
GTTGTGTGTTTGAGAAACAAGAACCGCTTTCTTTGCATCGCCGCAGGTGT
CCCGAGTGCTGCGACTGCTTTCCTGCAACGACAAGTACCTGCAGCTGTCT
GCAGTGCGGTTCCTTCGGAGCTGCGTGGGGATAAAGGACGAGTTTTACAA
CAGGTACTATGCTTGAAACGCCTACAATTGGCAAGCAATGCGAAATAACG
TGAAACGTGAATCAAAGGCTTAACAGGTGTCTGCGTGATTCCTGGCGATT
TCCCTCTCTCAATCTACTCCACTGGGAAGAAATGTTTTGTCCTCTGCTTG
CTCTCGTAAGTCATTGCTTTATCGTGTAGTGTCATACCTGGTAGATTATC
CCCCCCCCCGGATCTCCTTCCCGTTGTCTAGTACTTCAGTACACTTCTTC
ACAAGCATTCCTTTTCTGGCTTTGGGGTTTCCCTTCTTCTCACGCGAATC
GATTGTTTTTTCTTGTTTCCGCCTCTCGTTGTTGTTTTCTTCGAAGCGTT
AATTTTTCTGACCTCTTTTTCCTTTCTTCGCACAAACAGTCCCGGCTCCC
CCCCCCCCGAAACTCTTCGTTGTAATCAGGTACTTGGTGAAGAACAACCT
ACTGGCACCCGTCTTCGCGCTGTTCCGGGAGAACAGAGGGCGGGACAACC
TCGTCAACTCGGCCGTTATCGAGCTCGTTGAGGTATGTGAAGCGTATGTA
TTTGTTGTTGTTGTTGTCGTTGTTGCTGTTGTTGTTGTCGATTGCCTTTA
CATAAGGAGCCGTTCCCATCTCACGCCTGCCGTGCCTTGTCCGATTGACG
CCGACGCCTTCCGTGGCCATGGGCTATACGTACCCCGAAAGTGAAAGTGA
ATACCTGTAGAAGGACCCAGAAATATATCCACAACGAACGACCGCGATAT
TACCGTCCGGTGTGTGTGAGCTGCGATACGCATGTTTGACGAAACGAGTG
GGCGCGGTACTCTGTACCGACGAGATCCCCGGCGCTTGCCCCTCTCTCCG
CATCAACACAACCGTTAGCACACAATACACCTTGGCATTTCTTGTACGCG
GAGGGTGATGCAGATTTACAAAGTGGCCGACGATTATCTCGGTGCCATTC
ATTACGTGTGTGAATGTATTGGTGCCCTGTGATTTGTCTCGCGCACACGG
ACTAATGCTGGCAAGAATCCCCCCCTTCCCCTCCCCCTTTCCTGCTTCAA
AACATTCGGACCCCATGCCACGTGTGCCACAAATAAACTTGCACGAAGTT
TATTCGCACGGAGAACGTGAAGAGCCTGGTGGAGCACGTGGTGGAGAGAT
TCTCGTCTTCGTTTGTGGAGGTGGACCAGACGGGCACCCTCGAGGGCATC
AAGCTCAAGCACGAGCAGAACATCGACCTCAGGGAGAACCGGGACAGGGA
TTTCGGGGGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14006:1546..3705-

>mRNA_Ecto-sp13_S_contig14006.3130.1 ID=mRNA_Ecto-sp13_S_contig14006.3130.1|Name=mRNA_Ecto-sp13_S_contig14006.3130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=630bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14006:1546..3705- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAGCCAACGGCGAGGCCGCACGCGGTTCTACGAAGGGGGGAAAGGG
GGACGGCAAAGCGGGAGGGTTTCGGCAGGGTGGGGGGGGTAGCGATAGCA
GCAGTGGTGGATGTGCGCCAGGCGGTTCGGGGGGGGGTGACGCGAGATCG
AAGATGAGGATGCTGCAGGTGTCGCGGGGGCACATCTGCGACCTGCTCTC
GTTCTGCGTCCGAAGTCATACCTTCCGCATGAAGTACTTCGTGCTGAGGA
ATAATGTGGTGTCCCGAGTGCTGCGACTGCTTTCCTGCAACGACAAGTAC
CTGCAGCTGTCTGCAGTGCGGTTCCTTCGGAGCTGCGTGGGGATAAAGGA
CGAGTTTTACAACAGGTACTTGGTGAAGAACAACCTACTGGCACCCGTCT
TCGCGCTGTTCCGGGAGAACAGAGGGCGGGACAACCTCGTCAACTCGGCC
GTTATCGAGCTCGTTGAGTTTATTCGCACGGAGAACGTGAAGAGCCTGGT
GGAGCACGTGGTGGAGAGATTCTCGTCTTCGTTTGTGGAGGTGGACCAGA
CGGGCACCCTCGAGGGCATCAAGCTCAAGCACGAGCAGAACATCGACCTC
AGGGAGAACCGGGACAGGGATTTCGGGGGA
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