prot_Ecto-sp13_S_contig1400.3126.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1400.3126.1
Unique Nameprot_Ecto-sp13_S_contig1400.3126.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length827
Homology
BLAST of mRNA_Ecto-sp13_S_contig1400.3126.1 vs. uniprot
Match: A0A6H5KQR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR5_9PHAE)

HSP 1 Score: 592 bits (1526), Expect = 2.770e-196
Identity = 570/738 (77.24%), Postives = 581/738 (78.73%), Query Frame = 0
Query:   85 MIGIDPAMPRNDPATAAAPMVMMSDTGPRCQQPERKPWLKPVASLLRGLPQPRKEQXXXXXXXXXXXSG--RNGFARAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDYPHFERRPGQPLQSGAPFGSGSSSGGGDNDVSRSRSPRIVRGPEMFHPSSSAPDANAPLPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHVSAT--EAAIAAVPEDPYRTPTGAAAATPFWGEPDESPIKHQRNNGGGAGIVKTPRSQQPXXXXQQ-------CSFGGCSKRATHAARGDRSSHCSEHRLPGMTDTTAVAMPGGSKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTTGGGGGAKPCSSPAKRARNGPRSFAHDSAAAAXXXXXXPPALPAGAXXXXXXXXXXXXXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKEAADLGTSDKNNPVPRHAAAVARRVRHHHQPAPRTVNTNMATIAVEAAVGVDIPATTANSSSSSLSAMAGKGDDYRFSGKDGXXXXXXXXXXXSFFHPESVAGRTGXXXRAWAPGNA 811
            MIGIDPAMP +DPATAAAPMVMM + GPRCQQPERKPWLKPVASLLRGLPQPRKE XXXXXXXXXXX    RNGF+ AFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDYPHFERRP QPLQ GAPFGSGSSSGGGDNDVSRSRSPRIVRGPE+FHPSSSAPDANAPLPPSPXXXXXXXXXXXXXXXXXX                                                     XXXXXXXXXXXXXXXXX        EAAIAAVPE+PYRTPT AAAATPFWGEPDESPIK                    XXXX         C FGGCS+RATHAARG+R  HCSEHRLPGM DTTAVA PGGSKRN XXXXXXXXXXXXXXXXXXXXXXXXXXXDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRST GGGGGAKPCSSPAKRARNGPRSFAHDSA   XXXXXXPP LPAGA          XXXXXXXXXX  RAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGK+AADLGTSD N+PVPRHAAAVARR RHHHQPAPRTVN NMAT+A  AAVGVD+PATTA       S MAGKGDDYRF G              SFFHP SVAGRTG   RAWAPGNA
Sbjct:    1 MIGIDPAMPHDDPATAAAPMVMMGNVGPRCQQPERKPWLKPVASLLRGLPQPRKEXXXXXXXXXXXXXXXXRNGFSPAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDYPHFERRPEQPLQPGAPFGSGSSSGGGDNDVSRSRSPRIVRGPEIFHPSSSAPDANAPLPPSPXXXXXXXXXXXXXXXXXXSVERRLYDLQTQTAVHHPRHRSRSLHDHPDAFLLRDDMIISNHQQDGVAANGSXXXXXXXXXXXXXXXXXXXXXXXXXEAAIAAVPEEPYRTPTRAAAATPFWGEPDESPIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCMFGGCSRRATHAARGERPGHCSEHRLPGMADTTAVATPGGSKRNRXXXXXXXXXXXXXXXXXXXXXXXXXXXDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGGGGGAKPCSSPAKRARNGPRSFAHDSAXXXXXXXXXPPGLPAGAMPAFSLGAAGXXXXXXXXXX--RAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKDAADLGTSDNNDPVPRHAAAVARRARHHHQPAPRTVNPNMATVAAAAAVGVDLPATTAXXXXX-XSMMAGKGDDYRFGG-----GGRGIATTTSFFHPGSVAGRTGGGGRAWAPGNA 730          
BLAST of mRNA_Ecto-sp13_S_contig1400.3126.1 vs. uniprot
Match: D8LPT3_ECTSI (EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT3_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.050e-98
Identity = 285/364 (78.30%), Postives = 289/364 (79.40%), Query Frame = 0
Query:  449 MTDTTAVAMPGGSKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTTGGGGGAKPCSSPAKRARNGPRSFAHDSAAAAXXXXXXPPALPAGAXXXXXXXXXXXXXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKEAADLGTSDKNNPVPRHAAAVARRVRHHHQPAPRTVNTNMATIAVEAAVGVDIPATTANSSSSSLSAMAGKGDDYRFSGKDGXXXXXXXXXXX-SFFHPESVAGRTGXXXRAWAPGNA 811
            MTDTTA A PGGSKRN                            DNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRST G    AKPCSSPAKRARNGPRSFAHDSAA  XXXXXXPPALPAGA        XXXXXXXXXXXX  RAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGK+AADLG SD N+PVPRHAAAVARR RHHHQP+PRTVNTNMATIA  AAVGVD+P TTAN  SS LS M GKGDDYRFSGKDG            SFFHPES AGRTG   RAWA GNA
Sbjct:    1 MTDTTAAATPGGSKRNRCQMPGCSKPPRYALPGQKAEYCTLHKMDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGA---AKPCSSPAKRARNGPRSFAHDSAAXXXXXXXXPPALPAGAMPAFSLGAXXXXXXXXXXXX--RAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKDAADLGASDNNDPVPRHAAAVARRARHHHQPSPRTVNTNMATIAAAAAVGVDLPGTTANGGSS-LS-MEGKGDDYRFSGKDGGGSGGRGIVMTTSFFHPESGAGRTGGGGRAWAHGNA 357          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1400.3126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQR5_9PHAE2.770e-19677.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPT3_ECTSI1.050e-9878.30EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1400contigEcto-sp13_S_contig1400:11263..17382 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1400.3126.1mRNA_Ecto-sp13_S_contig1400.3126.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1400 11013..17382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1400.3126.1 ID=prot_Ecto-sp13_S_contig1400.3126.1|Name=mRNA_Ecto-sp13_S_contig1400.3126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=827bp
MAAFHLGRSSTRPAGHSGQTIYTNSSSSSSSSISWTWPPRSSSVPQQQQQ
QHQLDGGGRTSRNEDDSTSSNNEKKRSSSSSSSSMIGIDPAMPRNDPATA
AAPMVMMSDTGPRCQQPERKPWLKPVASLLRGLPQPRKEQQQQQHDDWSG
GSGRNGFARAFGPPPQQQCPPGWRSTTSSAAAALPTAVATEPPPTAAATS
DDYPHFERRPGQPLQSGAPFGSGSSSGGGDNDVSRSRSPRIVRGPEMFHP
SSSAPDANAPLPPSPPRQQQYQHRRGGSSSSAASHERRLYDLQTQAAVHH
HHHHRSSSLHDHPDAVLLRDDMIISNHHQQDGVAANGSSSLYFEHQQQQR
RSSYHVSATEAAIAAVPEDPYRTPTGAAAATPFWGEPDESPIKHQRNNGG
GAGIVKTPRSQQPRQQQQQCSFGGCSKRATHAARGDRSSHCSEHRLPGMT
DTTAVAMPGGSKRNRCQMPGCSKPPRYALPGQKAEYCTLHKMDNYVDVKH
PRCESELGCVRQPTFGWEGEKARFCSAHKIENMLDVKNPRCGEPGCLKRP
RYGEEGGRARFCAAHRFDDMVDLASRRSTTGGGGGAKPCSSPAKRARNGP
RSFAHDSAAAAAAAAAKPPALPAGAMPAFSLGAAGGGSGGGGSGGGGRAP
LPKRGHPVPKRGHTPARAGGHRRATSESWIDFCPKRVFETTTGKEAADLG
TSDKNNPVPRHAAAVARRVRHHHQPAPRTVNTNMATIAVEAAVGVDIPAT
TANSSSSSLSAMAGKGDDYRFSGKDGGGGGTGIATTTSFFHPESVAGRTG
GGGRAWAPGNAAAGWLSSGGGGGGGGG
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