mRNA_Ecto-sp13_S_contig14.3121.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: A0A6H5JEG6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEG6_9PHAE) HSP 1 Score: 730 bits (1884), Expect = 3.640e-261 Identity = 389/408 (95.34%), Postives = 397/408 (97.30%), Query Frame = 1
Query: 1 MVRWRSTALILGLVTHGCVSFVPAFFGGIARTPGTASSINRASVSHGSGGISPSCRVSSSKANLHHRASSAGPLMMAKGKKKGKGKAGRLELIESVAAATEKGDADSQSDEEDDETATPAFNIDKLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDGWRALMQEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWKIIRDDVDPPPDKKKGAK 1224
MVRWRSTALILGLVTHGCVSFVPA FGGIARTPGT SSINRA SHGSGGI PSC VSSS+ANLH RASSAGPLMMAKG+KKGKGKAGRLELIESVAAATEKGDADSQSDE+DDE ATPAFNIDKLKAETKTPFRTFRIFIYGAFG+SALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKIT DVNADRVKQLRALSVKVPGSG+GAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSI+AAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDGWRALM+EEFEAAERQGVVA+SSGKDGIVLLVSKKGKVLRRGVGIPMW IIRDDVDPPPDK KGAK
Sbjct: 1 MVRWRSTALILGLVTHGCVSFVPASFGGIARTPGTTSSINRAYFSHGSGGICPSCHVSSSQANLHRRASSAGPLMMAKGRKKGKGKAGRLELIESVAAATEKGDADSQSDEQDDEVATPAFNIDKLKAETKTPFRTFRIFIYGAFGVSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITSDVNADRVKQLRALSVKVPGSGNGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSILAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDGWRALMREEFEAAERQGVVAQSSGKDGIVLLVSKKGKVLRRGVGIPMWNIIRDDVDPPPDKTKGAK 408
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: A0A835Z880_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z880_9STRA) HSP 1 Score: 218 bits (556), Expect = 2.230e-62 Identity = 137/308 (44.48%), Postives = 192/308 (62.34%), Query Frame = 1
Query: 328 DEEDDETATPA-------FNIDKLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEA-----------KQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDGWRALMQEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWKIIRDDVDP 1197
+EE + TATPA F+ KL AE TPFRT R+FIYGAF SALIGG+T+ TQLAA++++Q AL L + L+N+ VDFGV+A + YNFE Q++ L + + A RE+ K + I +V RV++LR L +++ S S K P+GVLM EA KQ ++AGGKE +RD+++ A + + +IF + NLL+VPV++ SD A KGFG +Y +QG+V P +ED WRAL+ EE A+RQG + K G+VL+VS+ GKVLRRG+G+P W +IR D+ P
Sbjct: 13 EEESNSTATPAEQDDRGSFDKSKLAAEVSTPFRTLRLFIYGAFATSALIGGLTACTQLAASVANQLDALPLSQCLLNVGVDFGVVAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSES-----ETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNR-EIFTANNLLIVPVQVADPSDPTAAV-TDKGFGAKPAYFKQGFVGEPAEEDEWRALVAEEIRDADRQG--NSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYP 311
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: A0A7S4A636_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A636_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.210e-33 Identity = 105/283 (37.10%), Postives = 152/283 (53.71%), Query Frame = 1
Query: 373 KLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDGWRALMQEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWKIIRDDVDPPPDKKKGA 1221
KL E ++P+RT R FIYGAF LSA +GG+T+LTQLAA +S QP AL L++ + N++VDFGV+AA A+ + + LE+ + A +T I + A + L+ L V V G + A V L A QA V+AG V D++ A++ + + + +LVVPV + A G S SY G+VA PVD W+A E A QG A+++ +DGIV+ V G V RRG+G P+WK++ ++ PP KK+ A
Sbjct: 79 KLLQEAESPWRTVRKFIYGAFALSATVGGLTALTQLAAAVSKQPDALPLEQTIQNVVVDFGVVAACAYGAKVDGAADSGLEEDDGAP--------STTIDDEAIAANLATLQKLEVTVAGE---------RVANVETLRTAANQAVVVVAGPSSVVDDALRDALIEQKTL-AAAEVLVVPVRTSAEDAVEAAMGRR-----SDSY---GFVAPPVDAAKWKAYAAAECAVAAGQG--AETAAEDGIVIAVRADGTVARRGLGKPVWKMVAAELSPP--KKEEA 331
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: A0A7S1TN68_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TN68_9STRA) HSP 1 Score: 132 bits (331), Expect = 8.750e-30 Identity = 104/292 (35.62%), Postives = 154/292 (52.74%), Query Frame = 1
Query: 376 LKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQED----LEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVK-------VPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGK-EFVRDSIVAAMLAKNQIFPSLNLLVVPVEME----VASDGKGAKGLAKGFG-TSLSYEEQGYVA--APVDEDGWRALMQEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWKIIRDDVD 1194
++ E +PFR R F+YGA L +G +T+L+QLAA +S GA E+ K N +DF V+AAA + F++ Q+E LE VE NR K+T D ++ LR L+V VP S E +A V L+ +A + V A E V++++V A + Q F + N+L+VPVE+E A GA KGFG TS + EQGYVA AP E W +++E AE QG V + K+GI + + K V RRG+G+P+W+ + ++++
Sbjct: 122 MQEEITSPFRGLRFFVYGAGFLGGGVGFLTALSQLAAGVSGVEGAPEVAKSATNAAIDFAVVAAAIAGWRFDSKQREQKIGALEDVETRNR--------GKVTDDAATAKLAALRELNVMLSIADADVPEGFSAPEGAVGLKAKVDDLLGKASSSVVVFASTSGERVKEALVKAQILGEQEFLNKNVLIVPVELEKLRRAARGAAGASTEKKGFGATSPVWMEQGYVAPPAPGTEKAWLEYVEQEIADAEAQGAV--NPAKEGIAICLRKNKTVSRRGLGVPLWEDVINELN 403
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: A0A7S2S088_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S088_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.690e-29 Identity = 99/288 (34.38%), Postives = 153/288 (53.12%), Query Frame = 1
Query: 370 DKLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSY-----EEQGYVAAPVDEDGWRALMQEEFEAAERQ--GVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWKIIRDDVDPPPDKK 1212
D+L+ E PFR R F+YG+ G SA IGG TS TQLAA+ S AL ++L N+ +D V+ A+ + +++ QQ+ Q A R+KR K TK+ +L+ LS++V GS + ++A V L + AKQ V+AG VR+S++ A + + F N+LVVP + S+G +KG AK S Y E A PV++ W + +Q E + A Q G +GIV+++++ GK++RRG+G+P+W + DD+ P K
Sbjct: 28 DRLREEAANPFRLLRYFVYGSAGASAAIGGFTSATQLAASASGVSNALPQDQLLQNIAIDGAVILASIGLWRWDSEQQKQALQRMVA-RDKRSK---TKLDTSAQKSLASELQGLSLEVVVGGSE---DATRQATVQELNEGAKQHLVVVAGTTSMVRESLIKAQILGER-FARQNVLVVPYYFD--SNGP-SKGFAKDTLISKPYIARIPETSDVSANPVED--WASYIQRELDTAVSQSPGATTVDLKAEGIVVVLNRDGKIVRRGLGVPLWATVIDDLAPAQASK 302
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: A0A7S2A3N0_TRICV (Hypothetical protein n=3 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A3N0_TRICV) HSP 1 Score: 124 bits (312), Expect = 4.620e-27 Identity = 92/280 (32.86%), Postives = 152/280 (54.29%), Query Frame = 1
Query: 373 KLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLE-QVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDGWRALMQEEF-EAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWKIIRDDVDPPPD 1206
KL +E+ P+RT R+F+Y + G A IGG+ +L+ +AA LS G +++ +NL +DFG A AF + ++ + +L VEA KR+ K + + R + L+ L++ V S G + KEA V L AKQ V+AGG++ +RD+++ A L + F ++LVVP E V++ + ++ + GFG +E YVA V DGW ++ E +A E+ G K +DGI ++V G ++RRGVG W+ + ++++ D
Sbjct: 153 KLLSESIAPWRTVRLFLYASLGSGAFIGGLVTLSGVAAALSGVKGEVDMNTEYLNLAIDFGAAATFAFLFKYDVDKGSELNTNVEAKLERKRRDKKLS----EAMKARERTLQDLNLSVRVSADGKQT---KEASVSALQTGAKQHLIVVAGGRQAIRDALLGANLMQMD-FALRDVLVVPYEYGVSAAERQSRP-SGGFGERPQWETANYVAECVG-DGWEEYIESEMADAVEQNGEKVK---EDGIAIVVKNTGSIIRRGVGKVPWRDMVNELEGTKD 419
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: A0A7S2XLX4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLX4_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.560e-24 Identity = 89/281 (31.67%), Postives = 143/281 (50.89%), Query Frame = 1
Query: 373 KLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDGWRALMQEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWKIIRDDVDPPPDKKK 1215
KL AE+ P+RT R+F YG+ G A +GG+ +LT +AA LS L+L +NL +DFG AA AF + + E E + +K + K K + +R K L L++ + + GA + A VG + KQ ++AG ++ RD+++ A + K F N+LVVP + + K K + GF +E Q YVA DGW + E A +QG + +GI ++++ GKV+RRGVG+ W+ + D+++ + K+
Sbjct: 75 KLLAESIAPWRTVRLFAYGSLGSGAAVGGLITLTGVAAALSGARADLDLNTEYLNLAIDFG--AALAFAVFAKLDLDKGAELSEKVD-DKMARKKEQKTIANEMKEREKGLSKLNLDICVAADGAT----QTAQVGAIQTGGKQHIIIVAGPRKACRDALMGANILKLD-FSMSNILVVPYDTSTTKEDKVLKP-SGGFADKPLWESQPYVAQTTG-DGWEEYIDAEMTDAVKQG--GEKVKNEGIAIVLANNGKVIRRGVGMIPWRKMVDELEAATNPKE 343
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: A0A7S2W6I2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W6I2_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.820e-23 Identity = 90/271 (33.21%), Postives = 142/271 (52.40%), Query Frame = 1
Query: 373 KLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKR-QKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEV-ASDGKGAKGLAKGFG--TSLSYEEQGYVAAPVDEDGWRALMQEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWK 1173
KL +E+ P+RT R+F Y A G A +GG+ +LT +AATLS P ++L +NL +DFG +AA A + F+ Q +L++ N E R QK K K+ +R L L + + S G + EA + KQ ++AG + +RD+++ A L K + F ++LVVP E++ SD KGF + ++E Q YVA+ V + GW ++ E A +Q + ++GI ++V+ GK+ RRGVG W+
Sbjct: 70 KLVSESIAPWRTLRLFFYVALGSGAFLGGLVTLTGVAATLSGAPSDVDLNTDYVNLAIDFGFVAAFAVLFKFDKDQGIELQE----NVEIRIQKKKEDKVIKKGMKERESTLGKLMLNIRISDDGKTQDALVEA----VQQGGKQHMIIVAGPRSAIRDALLGANLLKME-FSMRDVLVVPYELDKDESDKMSRPDATKGFSGDSRPTWETQPYVASVVGK-GWDEYIEAELSDAIKQS--GEKVKEEGIAIVVANTGKITRRGVGKVPWR 328
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: F0Y9V5_AURAN (C2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9V5_AURAN) HSP 1 Score: 114 bits (285), Expect = 9.160e-23 Identity = 92/276 (33.33%), Postives = 142/276 (51.45%), Query Frame = 1
Query: 373 KLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDG--WRALMQEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWKIIRDDVD 1194
KL E +TP+RT R F YGAFGLSA +GGIT+L Q AA+++ QP AL L + +N+LVD GV+AA + + + + D+ + + + DV R + L V V G G +L+ + A V L +A QA VL G + V D+++ A++ +N F +VVPV ++ DG GA +L+ +E +VA P +D WR+ +++E A QG + G+V+ + + G V R VG P W + +D
Sbjct: 53 KLLQEAQTPWRTVRTFFYGAFGLSATVGGITALAQTAASVAGQPDALPLSQCGVNVLVDAGVVAACLYGNSVDNGEAADITVAD----------ETAPLADDVAEARRDAVAKLRVDV---GLG-DLK--RSAAVRTLQRDAGQAVVVLGGPRAAVDDALLDALIQRNA-FARAECVVVPVRLD---DGAGAAPATN----ALTVDEAPFVALPNADDAAAWRSYLEDELATAADQGADTSA----GVVVALRRDGTVASRNVGKPPWPQLIAAID 300
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Match: A0A6S8B4J3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8B4J3_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.020e-22 Identity = 86/278 (30.94%), Postives = 138/278 (49.64%), Query Frame = 1
Query: 373 KLKAETKTPFRTFRIFIYGAFGLSALIGGITSLTQLAATLSDQPGALELQKVLINLLVDFGVMAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDG--WRALMQEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWKIIRDDVDPP 1200
+L E TP+R R F YGAFG SA +GG+T+L QL +L+ + +L L KV+ N+ +DFGV+AA + + D+ N +T D A R L L V V G E + +EA + L A+Q+F V+AG + + D++ A++ + ++F +VVPV E K + + G+VA P +D W + E A++QG +++ +GIV+ V + G + RRGVG P WK + ++++ P
Sbjct: 64 RLMQEASTPWRGLRNFFYGAFGFSASVGGLTALAQLVGSLTGRADSLPLIKVITNVGIDFGVVAACVAGWRIDARATADVTTSLDEN---------VALTDDEAAARTSSLLKLRVSV-----GLE-DNRREATLDTLRSVARQSFIVIAGPRAAIDDALKDALI-QQKLFAKSECVVVPVASEKDPVLVPNKPVYR----------SGFVALPSPDDAMAWTDFVAAEIATAKQQGC-DENALSNGIVIAVRRDGTIARRGVGRPPWKSLLNEIETP 314 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14.3121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14.3121.1 >prot_Ecto-sp13_S_contig14.3121.1 ID=prot_Ecto-sp13_S_contig14.3121.1|Name=mRNA_Ecto-sp13_S_contig14.3121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=409bp MVRWRSTALILGLVTHGCVSFVPAFFGGIARTPGTASSINRASVSHGSGGback to top mRNA from alignment at Ecto-sp13_S_contig14:40968..48280+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14.3121.1 ID=mRNA_Ecto-sp13_S_contig14.3121.1|Name=mRNA_Ecto-sp13_S_contig14.3121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7313bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14:40968..48280+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14:40968..48280+ >mRNA_Ecto-sp13_S_contig14.3121.1 ID=mRNA_Ecto-sp13_S_contig14.3121.1|Name=mRNA_Ecto-sp13_S_contig14.3121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1227bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14:40968..48280+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |