prot_Ecto-sp13_S_contig13980.3103.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13980.3103.1
Unique Nameprot_Ecto-sp13_S_contig13980.3103.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length139
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13980.3103.1 vs. uniprot
Match: D7FIG3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIG3_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.720e-7
Identity = 26/29 (89.66%), Postives = 29/29 (100.00%), Query Frame = 0 
Query:   17 KPSVVAGIDARLKATLPAGQQRSWVDIPR 45
            +PSVVAGIDAR+KATLPAG+QRSWVDIPR
Sbjct:   24 QPSVVAGIDARVKATLPAGRQRSWVDIPR 52
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13980.3103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIG3_ECTSI3.720e-789.66Endo/exonuclease/phosphatase domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..138
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.815

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13980contigEcto-sp13_S_contig13980:451..1720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13980.3103.1mRNA_Ecto-sp13_S_contig13980.3103.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13980 145..2050 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13980.3103.1 ID=prot_Ecto-sp13_S_contig13980.3103.1|Name=mRNA_Ecto-sp13_S_contig13980.3103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=139bp
MLLLRALLFVPSVLGIKPSVVAGIDARLKATLPAGQQRSWVDIPRSCSPS
LEGAPPSQVPRFPLTRQRLLGCSQLLQCKVETQGEEVGKQDDRGSAQKRR
PQGSLSTTTTSLWADVVVGCPFPEDLVAYSGRVVGTLF*
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