prot_Ecto-sp13_S_contig13979.3100.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13979.3100.1
Unique Nameprot_Ecto-sp13_S_contig13979.3100.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length156
Homology
BLAST of mRNA_Ecto-sp13_S_contig13979.3100.1 vs. uniprot
Match: D7FGX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX5_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 6.110e-97
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0
Query:   21 LQIRSSPWTRREQEVTFHRNGTMSSNEGNKGEWWFDVGGLYWDVNTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDTADTSYRHRQTGTSEQASPPPPRKTDRY 155
            LQIRSSPWTRREQEVTFHRNGTMSSN+GNKGEWWFDVGGLYWDVNTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDTADTSYRHRQTGTSEQA  PPPR+TDRY
Sbjct:   74 LQIRSSPWTRREQEVTFHRNGTMSSNDGNKGEWWFDVGGLYWDVNTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDTADTSYRHRQTGTSEQAGAPPPRRTDRY 208          
BLAST of mRNA_Ecto-sp13_S_contig13979.3100.1 vs. uniprot
Match: A0A835YRW5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW5_9STRA)

HSP 1 Score: 150 bits (379), Expect = 6.190e-44
Identity = 62/109 (56.88%), Postives = 84/109 (77.06%), Query Frame = 0
Query:   30 RREQEVTFHRNGTMSSNEGNKGEWWFDVGGLYWDVNTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDTADTSYRHRQT 138
            R ++  TFH++GT+ S     G WWFDVGGL+W++      + T  H++AELHWN+FG+QPRMFRGT+TRDR P+S +PPWL RPV+ +F G G+GDDTADT+Y+HRQ+
Sbjct:   28 REDEYFTFHKDGTVESPGKADGRWWFDVGGLHWELK---EPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSSFMPPWLLRPVISTFTGYGIGDDTADTTYKHRQS 133          
BLAST of mRNA_Ecto-sp13_S_contig13979.3100.1 vs. uniprot
Match: A0A0G4EMR7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EMR7_VITBC)

HSP 1 Score: 113 bits (282), Expect = 1.050e-28
Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = 0
Query:   21 LQIRSSPWTRR-EQEVTFHRNGTMSSNEGNKGEWWFDVGGLYWDV---NTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDTADTSYRHR 136
            L++R   + RR E  + F R+G++ +++G+KGEW  D  G+ W+    NTT R       + AE+HWNVFGSQPRM++G ITRDR   +P+   LFRPV+G+F G G G DTAD SYR R
Sbjct:   70 LRVRRGLFRRRSEMRINFRRDGSLQTSDGHKGEWRLDKFGVMWEFLVDNTTHR-------YMAEVHWNVFGSQPRMYKGVITRDR--RAPIRADLFRPVIGTFTGIGCGTDTADVSYRDR 180          
BLAST of mRNA_Ecto-sp13_S_contig13979.3100.1 vs. uniprot
Match: A0A7S1BFC3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BFC3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.420e-28
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0
Query:   37 FHRNGTMSSNEGN--KGEWWFDVGGLYWDVNTTI---RAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDTADTSYRHRQTG 139
            F+R+G +S ++G+   GEWWFD GG+ WD++ T     A  T  H+ A++H N FG +PRM++G +TRDR  NS LPP LFRPV+ +F   GVG DT DT+Y++R  G
Sbjct:  168 FNRSGKVSMHDGSGVTGEWWFDQGGISWDMDITDVDNNAKKTTYHYHADIHMNKFGERPRMYKGVVTRDRYKNSFLPPSLFRPVIATFSAQGVGKDTRDTTYKNRLLG 275          
BLAST of mRNA_Ecto-sp13_S_contig13979.3100.1 vs. uniprot
Match: A0A7S2V1B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1B7_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 4.330e-18
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 0
Query:   30 RREQEVTFHRNG------TMSSNEGNKGEWWFDVGGLYWDVNTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDT 128
            R++  + F+  G       + ++EG  G+W  +  GL W     IR       + A +H N FG+ P+MFRG + RDR  +S LPPWLFRPVV +F G GVG+DT
Sbjct:   95 RKQSSIQFYHTGGEDDKGDLRTDEGETGDWAMEKLGLQWQ----IRRNGVAYTYYALVHHNTFGAAPKMFRGVVVRDRFASSFLPPWLFRPVVATFHGHGVGEDT 195          
BLAST of mRNA_Ecto-sp13_S_contig13979.3100.1 vs. uniprot
Match: A0A4D9CXA1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXA1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 7.080e-15
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 0
Query:   50 KGEWWFDVGGLYWDVNTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDT 128
            +G+W +D  GL W++           +H AEL W+ FG +P+M  G + R+R P SPLPPWL RPVVG+F G G G DT
Sbjct:   69 QGKWKYDKYGLNWELE---EGGLRYFYH-AELIWHSFGDRPKMHCGVVVRNRGPGSPLPPWLLRPVVGTFSGLGNGTDT 143          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13979.3100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FGX5_ECTSI6.110e-9797.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YRW5_9STRA6.190e-4456.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4EMR7_VITBC1.050e-2848.33Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S1BFC3_9STRA1.420e-2849.07Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2V1B7_9STRA4.330e-1840.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CXA1_9STRA7.080e-1546.84Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13979contigEcto-sp13_S_contig13979:1289..2538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13979.3100.1mRNA_Ecto-sp13_S_contig13979.3100.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13979 1097..2972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13979.3100.1 ID=prot_Ecto-sp13_S_contig13979.3100.1|Name=mRNA_Ecto-sp13_S_contig13979.3100.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=156bp
MIRTAGNRDAFMFSPSIVPNLQIRSSPWTRREQEVTFHRNGTMSSNEGNK
GEWWFDVGGLYWDVNTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRD
RLPNSPLPPWLFRPVVGSFIGSGVGDDTADTSYRHRQTGTSEQASPPPPR
KTDRY*
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