prot_Ecto-sp13_S_contig10306.310.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10306.310.1
Unique Nameprot_Ecto-sp13_S_contig10306.310.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length253
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: D7G3G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G6_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 6.490e-93
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0 
Query:    1 MWFGTFSGATAADKTVQIWETGNGKLINTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCV 198
            M FGTFSGATAADKTVQIWETGNGKLINTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCV
Sbjct:   91 MLFGTFSGATAADKTVQIWETGNGKLINTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCV 288
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BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: A0A7S3Y1M0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1M0_HETAK)

HSP 1 Score: 130 bits (326), Expect = 1.220e-32
Identity = 112/157 (71.34%), Postives = 130/157 (82.80%), Query Frame = 0 
Query:   42 WTENSRKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCV 198
            WT +++ +ATASDDKLIK++D+ TG+E  + EGH NYVFCVNFNNPQ NLLVSGSXXXXXXXXXXXXXXXXXXXXXXX        N DGT + XXXXXXXXXXXXXXXXXXXXXIFAEGNP VS+  F+PNGK++LA TLD ++RLWQ  + +KCV
Sbjct:    1 WTADAQYVATASDDKLIKLWDLHTGRESATFEGHSNYVFCVNFNNPQTNLLVSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDGTTLXXXXXXXXXXXXXXXXXXXXXXIFAEGNPPVSYVRFAPNGKFLLASTLDSTMRLWQTSNPSKCV 157
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BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: A0A836C9R4_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R4_9STRA)

HSP 1 Score: 129 bits (324), Expect = 7.020e-31
Identity = 96/191 (50.26%), Postives = 127/191 (66.49%), Query Frame = 0 
Query:   11 AADKTVQIWETGNGKLINTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRLWQIGHD---TKCV 198
            AAD TV+++   +G    +L GH QG+SD+AWT++SR +ATASDDKL+K++DVETGQ + S  GH ++VFC NF+   + +LVSG XXXXXXXXXXXXXXXXXXXXXXX          DG+ +V                     IFAEGNP+V F+T++PN +++LAGTLD  +RLW +G     TKC+
Sbjct:   61 AADLTVRLYSW-DGVFKASLNGHTQGISDVAWTQDSRYVATASDDKLLKVWDVETGQCLHSYAGHSHHVFCCNFDMRGSAMLVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGSCIVSASHDGLIRIWDTTTGNCLKTIFAEGNPAVCFATYTPNSEFILAGTLDHRIRLWTVGTTGTPTKCM 250
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BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: A0A1Z5JW27_FISSO (COMPASS component SWD3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JW27_FISSO)

HSP 1 Score: 115 bits (288), Expect = 1.220e-26
Identity = 109/196 (55.61%), Postives = 140/196 (71.43%), Query Frame = 0 
Query:    9 ATAADKTVQIWE----TGNGKLINTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRLWQIGH--DTKCV 198
            + +AD T +IW+    +   K + T TGHA+G++ ++W   +  +ATASDD+ ++++D  T + +    GH ++VFCV+  N   N+LVSG XXXXXXXXXXXXXXXXXXXXXX +PVTA +F  DGT V  XXXXXXXXXXXXXXXXXXXXI+A GNP VS   ++PNGKY+LAGTLD  LRLW I      +CV
Sbjct:   50 SASADGTAKIWDISLSSSQLKPLGTCTGHARGINQVSWNRAAPFLATASDDRTVRLWDAVTAEALVEFRGHSSFVFCVDQTN---NMLVSGXXXXXXXXXXXXXXXXXXXXXXXSDPVTAVSFGRDGTTVASXXXXXXXXXXXXXXXXXXXXIYAAGNPPVSTLRYAPNGKYLLAGTLDSVLRLWPISRTASNQCV 242
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BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: B7GA07_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GA07_PHATC)

HSP 1 Score: 105 bits (263), Expect = 5.900e-23
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 0 
Query:   27 INTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRLWQIGH--DTKC 197
            + T  GH++G++++ W   S  +ATASDDK I+++D  TG  +    GH+N+VFCV+    + ++     XXXXXXXXXXXXXXXX       +PVTA +FN DGT V  XXXXXXXXXXXXXXXXXXXXI+A  NP VS  T+SPNGKYVLAGTLD  LRLW +     +KC
Sbjct:  109 VVTCLGHSRGINEVCWNPTSPLLATASDDKTIRVWDAVTGDALVEFRGHDNFVFCVD---QKQSMXXXXXXXXXXXXXXXXXXXXXSTLPAHSDPVTAVSFNRDGTCVCSXXXXXXXXXXXXXXXXXXXXIYAAKNPPVSHITYSPNGKYVLAGTLDSMLRLWPVNRIGSSKC 278
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BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: A0A8H7IKL4_9AGAM (WD domain, G-beta repeat n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7IKL4_9AGAM)

HSP 1 Score: 99.8 bits (247), Expect = 6.770e-21
Identity = 48/86 (55.81%), Postives = 65/86 (75.58%), Query Frame = 0 
Query:   11 AADKTVQIWETGNGKLINTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGS 96
            AAD  ++IW + NG LI TL GH +GLSD+AW+ +SR +A+ASDDK ++IF +ET +  +   GH NYVFCVN+ NP +NL+VSGS
Sbjct:   68 AADGLIKIWSSYNGNLIRTLEGHQEGLSDVAWSGDSRYVASASDDKTVRIFTLET-RHPECFRGHTNYVFCVNY-NPSSNLIVSGS 151
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BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: A0A7S2WJQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJQ5_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.570e-19
Identity = 100/167 (59.88%), Postives = 121/167 (72.46%), Query Frame = 0 
Query:   27 INTLTGHAQGLSDLAW-TENSRKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRLWQIG 192
            + TL GHA+G++ + W T     +ATASDDK  +++DV TG+ +  ++GH N+VF V F NPQ+NLL+SG XXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXX +AEGNP VSF  +SPNGK++L+ TLD  LRLW  G
Sbjct:  124 VQTLIGHARGINHVDWSTRTGEYLATASDDKTCRLWDVSTGEALVELKGHSNFVFSVKF-NPQSNLLLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAEGNPPVSFVRYSPNGKFILSATLDGKLRLWNAG 289
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: J3MM93_ORYBR (Uncharacterized protein n=11 Tax=Oryza TaxID=4527 RepID=J3MM93_ORYBR)

HSP 1 Score: 93.6 bits (231), Expect = 9.160e-19
Identity = 81/199 (40.70%), Postives = 112/199 (56.28%), Query Frame = 0 
Query:    9 ATAA-DKTVQIWETGNGKLINTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVE------------------TGQEVQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRL 188
            ATA+ D TV +    +   I TL GHA G+SD++W+ +S  + +ASDD+ ++I+DV                     + ++ ++GH N+VF  NFN    N + SG                        +PVT+  F  DG+ +VXXXXXXXXXXXXXXXXXXXX +  +  P+VSFS FSPNGK++L  TLDDSL+L
Sbjct:   29 ATASLDGTVALLSPSSLSAIATLRGHADGVSDISWSTDSFYLCSASDDRTLRIWDVRPVLSGLNPGGGAQPADPNADRCIRVLKGHANFVFSANFNPQTNNTVASGGFDCTVRIWDVKSGRCVRAIDAHSDPVTSVHFIRDGSIIVXXXXXXXXXXXXXXXXXXXXTVIDDKMPAVSFSMFSPNGKFILVATLDDSLKL 227
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BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: A0A7J7IGL8_9RHOD (WD domain protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGL8_9RHOD)

HSP 1 Score: 93.6 bits (231), Expect = 1.670e-18
Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 0 
Query:    4 GTFSGATAADKTVQIWETGNGKLINTLTGHAQGLSDLAWTENS--------------RKIATASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLL 92
            G    +++ADKTV++W  G+G+L+  L GHAQG+SD+AW+  +              R +A+ASDD+ ++++DVE G  V   EGH NYVFC NF NPQ N+L
Sbjct:   67 GRLLASSSADKTVRLWSAGDGRLVGVLEGHAQGISDVAWSGAAAASDDTVRSSGALTRWLASASDDRTLRLWDVERGVAVHRFEGHSNYVFCCNF-NPQGNVL 168
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Match: K3ZV67_SETIT (Uncharacterized protein n=9 Tax=Paniceae TaxID=147428 RepID=K3ZV67_SETIT)

HSP 1 Score: 92.0 bits (227), Expect = 3.670e-18
Identity = 81/195 (41.54%), Postives = 112/195 (57.44%), Query Frame = 0 
Query:    9 ATAA-DKTVQIWETGNGKLINTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVET------------GQE--VQSMEGHENYVFCVNFNNPQANLLVSGSXXXXXXXXXXXXXXXXXXXXXXXEPVTAAAFNADGTGVVXXXXXXXXXXXXXXXXXXXXXIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRL 188
            ATA+ D TV +    +  +I  L GH  G+SDL+W+  S  + TASDD+ ++++D+ +            G +  V+ ++GH N+VF  NFN   ++ + SG                        EPVT+  F  DG+ + XXXXXXXXXXXXXXXXXXXXX   +  P+VSFS FSPNGK++L  TLDDSL+L
Sbjct:   40 ATASLDGTVALLSPSSLAVIAVLRGHTDGVSDLSWSTESYYLCTASDDRTLRVWDIRSVLAGGAQGAADPGADRCVRVLKGHTNFVFSANFNPQTSSQIASGGFDCTVRIWDVKSGRCNRAIDAHSEPVTSVHFIRDGSIIXXXXXXXXXXXXXXXXXXXXXXXIDDKKPAVSFSMFSPNGKFILVATLDDSLKL 234
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10306.310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3G6_ECTSI6.490e-9399.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3Y1M0_HETAK1.220e-3271.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836C9R4_9STRA7.020e-3150.26WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A1Z5JW27_FISSO1.220e-2655.61COMPASS component SWD3 n=2 Tax=Fistulifera solaris... [more]
B7GA07_PHATC5.900e-2355.49Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A8H7IKL4_9AGAM6.770e-2155.81WD domain, G-beta repeat n=1 Tax=Rhizoctonia solan... [more]
A0A7S2WJQ5_9STRA1.570e-1959.88Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
J3MM93_ORYBR9.160e-1940.70Uncharacterized protein n=11 Tax=Oryza TaxID=4527 ... [more]
A0A7J7IGL8_9RHOD1.670e-1844.66WD domain protein n=1 Tax=Cyanidiococcus yangmings... [more]
K3ZV67_SETIT3.670e-1841.54Uncharacterized protein n=9 Tax=Paniceae TaxID=147... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 221..235
score: 38.35
coord: 134..148
score: 39.84
coord: 92..106
score: 41.73
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 108..147
e-value: 1.5E-10
score: 51.0
coord: 65..105
e-value: 1.7E-8
score: 44.2
coord: 23..62
e-value: 1.2E-7
score: 41.4
coord: 150..190
e-value: 0.074
score: 22.2
coord: 194..234
e-value: 5.4E-7
score: 39.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 109..147
e-value: 2.3E-7
score: 31.4
coord: 24..62
e-value: 6.2E-5
score: 23.7
coord: 196..234
e-value: 4.3E-7
score: 30.5
coord: 165..189
e-value: 0.0038
score: 18.0
coord: 66..105
e-value: 8.7E-6
score: 26.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 30..71
score: 13.683
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 115..156
score: 16.256
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 72..114
score: 15.488
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 158..191
score: 10.041
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 201..243
score: 11.979
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..253
e-value: 3.8E-91
score: 307.1
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 7..252
IPR037866WD40-repeat-containing protein Swd3/WDR5PANTHERPTHR22847:SF516WD REPEAT-CONTAINING PROTEIN 5Bcoord: 7..252
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 92..106
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 7..21
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 134..148
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 221..235
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..253
score: 55.524
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 11..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10306contigEcto-sp13_S_contig10306:1422..5643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10306.310.1mRNA_Ecto-sp13_S_contig10306.310.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10306 1422..5643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10306.310.1 ID=prot_Ecto-sp13_S_contig10306.310.1|Name=mRNA_Ecto-sp13_S_contig10306.310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=253bp
MWFGTFSGATAADKTVQIWETGNGKLINTLTGHAQGLSDLAWTENSRKIA
TASDDKLIKIFDVETGQEVQSMEGHENYVFCVNFNNPQANLLVSGSFDEK
VKIWDVATGKCLRTMASHSEPVTAAAFNADGTGVVSGSADGLIRLWDSST
GACLKTIFAEGNPSVSFSTFSPNGKYVLAGTLDDSLRLWQIGHDTKCVKT
YKGHVNRRYSVTACFDGNKRVVSGSEDGSIYIWDINSSKSVVQRLQGHSG
EVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037866Swd3/WDR5
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf