mRNA_Ecto-sp13_S_contig13919.3061.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13919.3061.1
Unique NamemRNA_Ecto-sp13_S_contig13919.3061.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: D8LJV7_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV7_ECTSI)

HSP 1 Score: 649 bits (1674), Expect = 4.810e-223
Identity = 379/451 (84.04%), Postives = 386/451 (85.59%), Query Frame = 1 
Query:    1 TRSGMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPIAR------------------------------------------------RSRLGHGGMGADGLGGVSAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVGSFGLDGEGSGGDASNSMVSVGGPGAGGGRGAYASGILKGVPPGVRTMVQGLEGEVRGLKKKLKERKKEVMSIQAQLEARRAVFVESEKESKRRETELAEQLAVVRAQVSKVRAAAARTKEDQLNTVLAGSQSLLKRQRRMLLNATGQCCAEDEEVRVQDARERKAEARRHAQSLRALEFSKEVETENLRQHCEQLVQAEAEGRALTKAKLDNLRARRDREVRELSVELLLLHDHALSLHETIRSADLAPSSSCEAISTLAG 1209
            T +GMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPIAR                                                RSRLG+GG+GADG GGVSAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVG+FGLDGEGSGGDASNSM SVGG      RGAYASGILKGVPPGVRTMVQGLEGEVRGLKKKLKERKKEVMSIQAQLEARRAVFVESEKESKRRETELAEQL VV+AQ+S+VRAAAARTKEDQLNTVLAGSQSLLKRQRRMLLNATGQCC ED EVR QDARERKAEARRHAQSLRALEFSKEVETENLRQ CEQLVQAEAEGRALTK KLDNLRARRDREVRELSVELLLLHDHALSLHETIRSA LAPSSSCE ISTLAG
Sbjct:  337 TTTGMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPIARFSEECLSTLQFANRCRSVHNNPRVNKLGDGPGGDQRKLKKLQDEIQSLRSRLGNGGLGADGPGGVSAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVGNFGLDGEGSGGDASNSMASVGGAXXXXXRGAYASGILKGVPPGVRTMVQGLEGEVRGLKKKLKERKKEVMSIQAQLEARRAVFVESEKESKRRETELAEQLTVVQAQLSEVRAAAARTKEDQLNTVLAGSQSLLKRQRRMLLNATGQCCTEDGEVRAQDARERKAEARRHAQSLRALEFSKEVETENLRQQCEQLVQAEAEGRALTKTKLDNLRARRDREVRELSVELLLLHDHALSLHETIRSAGLAPSSSCEVISTLAG 787
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: A0A6H5K5P9_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P9_9PHAE)

HSP 1 Score: 560 bits (1443), Expect = 4.110e-188
Identity = 351/499 (70.34%), Postives = 362/499 (72.55%), Query Frame = 1 
Query:    1 TRSGMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPIARR-------------------------------------------------------------------------------SRLGHGGMGADGLGGVSAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVGSFGLDGEGSGGDASNSMVSVGGPGAGGGRGAYASGILKGVPPGVRTMVQGLEGEVRGLKKKLKERKKEVMSIQAQLEARRAVFVESEKESKRRETELAEQLAVVRAQVSKVRAAAARTKEDQLNTVLAGSQSLLKRQRRMLLNATGQCCAEDEEVRVQDARERKAEARRHAQSLRALEFSKEVETENLRQHCEQLVQAEAEGRALTKAKLDNLRARRDRE-----------------VRELSVELLLLHDHALSLHETIRSADLAPSSSCEAISTLAG 1209
            T +GMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPIAR                                                                                SRLG+GGMGADG G V AEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVG+FGLDGEGSGGDASNSM  VGGPGAGGGRGAYASGILKGVPP VRTMVQGLEGEVRGL+KKLKERKK+VMSIQ QLEARRAVFVESEKESKRRETELA+QLAVV+AQ+S+VRAAAARTKEDQLNTVLAGSQS+                           R R  EARRHAQSLRALEFSKEVETENLRQ CEQLVQAEAEGRAL KAKLDNLRARRDRE                 VRELSVELLLLHD+ALSLHETIRSADLAPSSSCEAISTLAG
Sbjct:  336 TTTGMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPIARCFCTPTTHACSVHVRFSEECLSTLQFANRCRSVHNNPRVNKLGDGPGGDQRKLRKLQDEIQALRQDKGLMAQRATGLGCVSRLGNGGMGADGPGVVRAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVGNFGLDGEGSGGDASNSMAGVGGPGAGGGRGAYASGILKGVPPCVRTMVQGLEGEVRGLRKKLKERKKDVMSIQTQLEARRAVFVESEKESKRRETELAQQLAVVQAQLSEVRAAAARTKEDQLNTVLAGSQSV---------------------------RFRTPEARRHAQSLRALEFSKEVETENLRQQCEQLVQAEAEGRALNKAKLDNLRARRDREAQTRFDHFSRITVLRQQVRELSVELLLLHDYALSLHETIRSADLAPSSSCEAISTLAG 807
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: A0A836CD56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD56_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.060e-37
Identity = 124/332 (37.35%), Postives = 162/332 (48.80%), Query Frame = 1 
Query:   10 GMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPIAR-----------------------------------------------RSRL-----GHGGMGADGLGGVSAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVGSFGLDGEGSGGDASNSMVSVGGPGAGGGRGAYASGILKGVPPGVRTMVQGLEGEVRGLKKKLKERKKEVMSIQAQLEARRAVFVESEKESKRRETELAEQLAVVRAQVSKVRAAAARTKEDQLNTVLAGSQSLLKRQRRML 849
            G+L+LVDLAGSERLKKSASEGQR+ EALHIN+SLT LGKVVMALDP+SG  H+PYRDSKLTRLLQNSLGGNSFT VLAT+HP+A                                                R RL       GG G+  +        ++VLAVL Q+G+     L  G  +LPDGR+VG                      PG GG  G  A  + +      +     LE E   LK KL ERKK +   +  L+ +R  + + + +++ RE  L   ++  +A+      A +R        + A S+ +L+ QR  L
Sbjct:  803 GILHLVDLAGSERLKKSASEGQRRKEALHINASLTVLGKVVMALDPASGAVHVPYRDSKLTRLLQNSLGGNSFTTVLATIHPVAHFYEECLSTLQFANRCRSVRNQPRVNYLASSAESDKKVKKLTEELNTLRQRLHAHTRSRGGSGS--IXXXXXXXXAQVLAVLEQIGIKGVEVLEEGGFKLPDGRVVGQPA-------------------PGVGGLTGGAA--VTR-----AQMRAAALEAEAAALKAKLSERKKALEDAELLLKEQRNAYTQLDSKARTREAALLLDVSAAQARAVAAAEACSRQIAKHAAAMAAHSEDMLREQRARL 1106
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: A0A225WN72_9STRA (Kinesin-like protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WN72_9STRA)

HSP 1 Score: 135 bits (341), Expect = 7.230e-32
Identity = 84/178 (47.19%), Postives = 105/178 (58.99%), Query Frame = 1 
Query:   10 GMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHP--------------------IARRSRLGH-GGMGADG-----------------LGGVSAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVGS 429
            GMLN++DLAGSERLKKS S+GQR  EALHINSSL+A+GKVVM+LDP SG  +IPYRDSKLTRLLQNS+GGN FT ++AT+HP                    +  + R+ H  G  AD                  L G+ AE N+R LA L ++G        NG I+  DG ++ S
Sbjct:   56 GMLNMIDLAGSERLKKSESDGQRLKEALHINSSLSAVGKVVMSLDPESGYNYIPYRDSKLTRLLQNSIGGNCFTTLIATIHPMKEHYEECLGTLQFANRCRSVQNQPRVNHINGTIADKDRRIRKLQEELGILRRQLEGLRAEYNNRFLATLNELGFQAEEMSENGEIKFADGLVLKS 233
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: K3X4B7_GLOUD (Kinesin-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4B7_GLOUD)

HSP 1 Score: 134 bits (337), Expect = 1.500e-31
Identity = 65/83 (78.31%), Postives = 76/83 (91.57%), Query Frame = 1 
Query:   10 GMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPI 258
            GMLN+VDLAGSERLKKS S+GQR  EALHINSSL+A+GKVVM+LDP SG  +IPYRDSKLTRLLQNS+GGN FT++LAT+HP+
Sbjct:  100 GMLNMVDLAGSERLKKSESDGQRLKEALHINSSLSAVGKVVMSLDPESGYNYIPYRDSKLTRLLQNSIGGNCFTILLATIHPM 182
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: A0A7S2WR91_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WR91_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.890e-31
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 1 
Query:    7 SGMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHP 255
            SG LNLVDLAGSERLKKS SEG R  EALHIN+SLTALGKVVMALDP++   H+PYRDSKLTRLLQNSLGGNS+T VLAT+HP
Sbjct:   83 SGKLNLVDLAGSERLKKSESEGMRLKEALHINTSLTALGKVVMALDPNAESQHVPYRDSKLTRLLQNSLGGNSYTTVLATIHP 165
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: D0NFE3_PHYIT (Kinesin-like protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NFE3_PHYIT)

HSP 1 Score: 134 bits (336), Expect = 2.830e-31
Identity = 84/175 (48.00%), Postives = 105/175 (60.00%), Query Frame = 1 
Query:    7 SGMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPI----------------ARRSRLGH-GGMGADG-----------------LGGVSAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVGS 429
            SGMLN+VDLAGSERLKKS S+GQR  EALHINSSL+A+GKVVM+LDP SG  +IPYRDSKLTRLLQNS+GGN FT ++AT+HP+                 R  R+ H  G  AD                  L G+  E N+R +A L ++G        +G I+  DG ++ S
Sbjct:   55 SGMLNMVDLAGSERLKKSESDGQRLKEALHINSSLSAVGKVVMSLDPESGYNYIPYRDSKLTRLLQNSIGGNCFTTLIATIHPMKEHYEECLGTLQFANRCRSPRVNHINGTIADKDRRIRKLQEESSILRRQLEGLRTEYNNRFVATLNELGFQAEEISESGEIKFADGLVLKS 229
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: A0A6G0XQE6_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQE6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.980e-31
Identity = 66/84 (78.57%), Postives = 78/84 (92.86%), Query Frame = 1 
Query:    7 SGMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPI 258
            SGMLNLVDLAGSERLKKS S+GQR  EALHINSSL+A+GKVVM+LDP SG  +IPYRDSKLTRLLQNS+GGNS+T+++AT+HP+
Sbjct:  293 SGMLNLVDLAGSERLKKSESDGQRLKEALHINSSLSAVGKVVMSLDPESGFNYIPYRDSKLTRLLQNSIGGNSYTILIATIHPM 376
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: G4Z1Z0_PHYSP (Kinesin-like protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z1Z0_PHYSP)

HSP 1 Score: 133 bits (334), Expect = 5.960e-31
Identity = 84/178 (47.19%), Postives = 105/178 (58.99%), Query Frame = 1 
Query:   10 GMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPI----------------ARRSRLGH-GGMGADG-----------------LGGVSAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVGSFGLD 441
            GMLN+VDLAGSERLKKS S+GQR  EALHINSSL+A+GKVVM+LDP SG  +IPYRDSKLTRLLQNS+GGN FT ++AT+HP+                 R  R+ H  G  AD                  L G+  E N+R +A L ++G        +G I+  DG ++ S   D
Sbjct:   56 GMLNMVDLAGSERLKKSESDGQRLKEALHINSSLSAVGKVVMSLDPESGYNYIPYRDSKLTRLLQNSIGGNCFTTLIATIHPMKEHYEECLGTLQFANRCRSPRVNHINGTIADKDRRIRKLQEELSILRRQLEGLRTEYNNRFVATLNELGFQAEEISESGEIKFADGLVLKSVFAD 233
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BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Match: A0A2P4Y0T5_9STRA (Kinesin-like protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0T5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.380e-30
Identity = 64/83 (77.11%), Postives = 75/83 (90.36%), Query Frame = 1 
Query:   10 GMLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLTHIPYRDSKLTRLLQNSLGGNSFTVVLATVHPI 258
            GMLN+VDLAGSERLKKS S+GQR  EALHINSSL+A+GKVVM+LDP SG  +IPYRDSKLTRLLQNS+GGN FT ++AT+HP+
Sbjct:   56 GMLNMVDLAGSERLKKSESDGQRLKEALHINSSLSAVGKVVMSLDPESGYNYIPYRDSKLTRLLQNSIGGNCFTTLIATIHPM 138
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13919.3061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJV7_ECTSI4.810e-22384.04Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K5P9_9PHAE4.110e-18870.34Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A836CD56_9STRA1.060e-3737.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A225WN72_9STRA7.230e-3247.19Kinesin-like protein n=1 Tax=Phytophthora megakary... [more]
K3X4B7_GLOUD1.500e-3178.31Kinesin-like protein n=1 Tax=Globisporangium ultim... [more]
A0A7S2WR91_9STRA1.890e-3181.93Kinesin-like protein (Fragment) n=1 Tax=Rhizochrom... [more]
D0NFE3_PHYIT2.830e-3148.00Kinesin-like protein n=1 Tax=Phytophthora infestan... [more]
A0A6G0XQE6_9STRA2.980e-3178.57Kinesin-like protein n=1 Tax=Aphanomyces euteiches... [more]
G4Z1Z0_PHYSP5.960e-3147.19Kinesin-like protein n=1 Tax=Phytophthora sojae (s... [more]
A0A2P4Y0T5_9STRA1.380e-3077.11Kinesin-like protein n=2 Tax=Phytophthora palmivor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13919contigEcto-sp13_S_contig13919:209..4565 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score653.3
Seed ortholog evalue7.4e-185
Seed eggNOG ortholog2880.D8LJV7
Model size1209
KEGG koko:K10396,ko:K10402,ko:K20196
KEGG Pathwayko04144,ko04728,map04144,map04728
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG4280@2759
Ec32 ortholog descriptionKinesin-like protein
Ec32 orthologEc-01_009850.1
Cds size1197
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13919.3061.1prot_Ecto-sp13_S_contig13919.3061.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13919 221..4565 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462742.78579-UTR-Ecto-sp13_S_contig13919:208..2201681462742.78579-UTR-Ecto-sp13_S_contig13919:208..220Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13919 209..220 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462742.7980587-CDS-Ecto-sp13_S_contig13919:220..4711681462742.7980587-CDS-Ecto-sp13_S_contig13919:220..471Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13919 221..471 +
1681462742.807347-CDS-Ecto-sp13_S_contig13919:1248..16001681462742.807347-CDS-Ecto-sp13_S_contig13919:1248..1600Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13919 1249..1600 +
1681462742.8163702-CDS-Ecto-sp13_S_contig13919:1870..20771681462742.8163702-CDS-Ecto-sp13_S_contig13919:1870..2077Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13919 1871..2077 +
1681462742.8261352-CDS-Ecto-sp13_S_contig13919:2285..23711681462742.8261352-CDS-Ecto-sp13_S_contig13919:2285..2371Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13919 2286..2371 +
1681462742.8359394-CDS-Ecto-sp13_S_contig13919:2918..29821681462742.8359394-CDS-Ecto-sp13_S_contig13919:2918..2982Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13919 2919..2982 +
1681462742.8457158-CDS-Ecto-sp13_S_contig13919:3202..33161681462742.8457158-CDS-Ecto-sp13_S_contig13919:3202..3316Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13919 3203..3316 +
1681462742.856957-CDS-Ecto-sp13_S_contig13919:4442..45651681462742.856957-CDS-Ecto-sp13_S_contig13919:4442..4565Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13919 4443..4565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13919.3061.1

>prot_Ecto-sp13_S_contig13919.3061.1 ID=prot_Ecto-sp13_S_contig13919.3061.1|Name=mRNA_Ecto-sp13_S_contig13919.3061.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=399bp
MLNLVDLAGSERLKKSASEGQRKTEALHINSSLTALGKVVMALDPSSGLT
HIPYRDSKLTRLLQNSLGGNSFTVVLATVHPIARRSRLGHGGMGADGLGG
VSAEANSRVLAVLAQMGLADAMQLPNGSIRLPDGRIVGSFGLDGEGSGGD
ASNSMVSVGGPGAGGGRGAYASGILKGVPPGVRTMVQGLEGEVRGLKKKL
KERKKEVMSIQAQLEARRAVFVESEKESKRRETELAEQLAVVRAQVSKVR
AAAARTKEDQLNTVLAGSQSLLKRQRRMLLNATGQCCAEDEEVRVQDARE
RKAEARRHAQSLRALEFSKEVETENLRQHCEQLVQAEAEGRALTKAKLDN
LRARRDREVRELSVELLLLHDHALSLHETIRSADLAPSSSCEAISTLAG
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mRNA from alignment at Ecto-sp13_S_contig13919:209..4565+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13919.3061.1 ID=mRNA_Ecto-sp13_S_contig13919.3061.1|Name=mRNA_Ecto-sp13_S_contig13919.3061.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4357bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13919:209..4565+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACGAGGTCAGGCATGCTCAACCTCGTTGACCTCGCCGGGAGCGAGCGGCT
GAAGAAGAGTGCGTCGGAAGGCCAGCGGAAGACAGAGGCCCTCCACATCA
ACTCGTCTCTCACGGCGCTGGGCAAGGTAGTGATGGCCCTGGACCCCAGC
TCGGGACTGACCCACATCCCCTACCGAGACTCCAAACTCACTCGCCTGCT
CCAGAACTCCTTGGGGGGCAACAGCTTTACGGTGGTGCTGGCGACGGTGC
ATCCTATCGCTCGGTGAGCCGACTGAGAGCAGCAGCACTGATGATACCGT
TGGTTTTCCGTTAAAGTACCAAGATGCGATTCAGAAGCACCTTCAATGGA
ACTCATGCTGTCCTACGGTGGCCTTACTAGAGAGGACTTGGAAAAATGTA
GATACGAGTGATTTTGATTAGGCGCCCTGCACGTGACTATCCATTTGCAT
GTTCCATGCCGACACAGCAATGGTGAGTGAGGTGAGTGAGAGTCAAACCA
ATGCGTAAGACTTGCGAACATGGCCAACAAACTTCCGAGTAGATGCTTTT
GTGCGCCCACTGCGCATGCTTGCTCCGTGCACGTAAGGTTTTCGGAAGAG
TGCCTGAGCACGCTTCAGTTCGCCAACCGGTGCCGGAGCGTACACAACAA
TCCCCGGGTGAACAAGCTTGGGGACGGTCCAGGGGGCGATCAACGCAAGC
TGAAGAAACTTCAGGATGAGATACAAGCGCTGAGGCAAGATAAAGGCTTG
ACGGCACAAAGAGCGACCGGTCTGGGTTGCGTGTGGCCTTCCAACCGTGG
AAACTAACTTTCTAAGAGTTCTCGGTGACCAAATGACCCCGCACTTCCGA
AGAACAGGCAAGGTTGCGTTGGATGTCGCGTTCTTGGAATGAGAGCCGTT
GAACAGATCCCACTCTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CATCCCTGTCCTTGGCGTCACACTTACAGCACAATCTTGACACCCCTCCC
TGCGGGCTACGCTTGTCGTCAAATAATCTTCGACCAAGAGCAGGTCACGA
CTCGGCCACGGGGGCATGGGAGCCGACGGCCTTGGGGGGGTCAGTGCAGA
GGCAAACTCCCGCGTGTTGGCGGTGCTCGCACAGATGGGACTAGCAGACG
CCATGCAGCTTCCCAACGGCTCCATCCGCCTCCCCGACGGTCGCATCGTC
GGGAGCTTCGGGCTCGACGGCGAAGGGAGCGGCGGCGACGCCAGCAACTC
TATGGTAAGCGTTGGGGGGCCGGGGGCTGGGGGCGGCAGGGGGGCATACG
CGAGTGGAATCCTGAAGGGCGTGCCGCCAGGCGTGCGGACTATGGTACAG
GGACTGGAGGGGGAAGTTCGCGGCCTCAAGAAGAAACTCAAGGTTCGTGG
AAATGACCGCAAAATAAATCCAAATGTTGGATGCGTTGGTCTCGTGTATG
GCACAGAGAGCAGGCTCGAACGGGTCAACCCAATTTTTCCGTTGTATTCC
GTCAGCTCTAGTGTATGCCCACGTAAATCCTCAAAATCCTCGGTCTTTGT
CCGTCTTGTTGCTTCCGCGTTGAACATAACGCCAAAAAACGTTTCAGACT
TGATCCCCAGCATTGCAGCCCTCCTTTTCATGGTAATCTTCCTTTTCCGG
CTTGGTTTCCAGGAGCGCAAGAAGGAGGTGATGAGTATCCAAGCCCAGCT
CGAGGCGCGGCGGGCGGTCTTCGTGGAGAGTGAAAAGGAATCGAAGAGGC
GAGAGACAGAGCTCGCGGAACAGCTTGCTGTTGTTCGCGCACAGGTATCC
AAGGTCAGGGCGGCGGCAGCTCGGACCAAGGAAGACCAGCTGAACACGGT
GCTGGCAGGGAGTCAGTCTGTGAGTGAGTGTAGCAGGTGGGGGTGGGCAG
CCTCGCAGCTGTACTTGATGGGCCCGTCCGCAGAGGGTGAGAAATGCTTG
CAGCGGTGCTAGTGTACGTCTCGCAGCGTGACCACATCGAACTTTAGATA
GTCGAAGGGACAGGAAGATTTATTTCCAATCGACTACTTTCCTGTTTATC
ACGATCCGCTGTGCCCTCCGTCCACAGCTCCTGAAGAGGCAGCGACGAAT
GCTCCTCAACGCAACGGGACAATGTTGCGCCGAAGATGAGGAAGTCAGGG
TTCAGGACGCCAGGTAAGGCGCGCGGTATGCCGCCCCAAGATGGAGGACA
AAACAAACCTACTGCCACGGACGCGTTAAGGGTGCGTTCATCCCCTGATC
GGTTTCACTACACAGAAAGAAGCGAGGCTCGGTAAATAGCCTAGTCGACG
CAAGGAAACATTGCTTTTCCAGGCCGCGGGAAGACACAAAACAAACAAGG
CACAACGATGGGTGCAAATATCCATTAGAAGGGCTTCAACCGCGCAAATA
GTCGCACTCGCTCTCGTCTAGATCTGGAACCACTCGAATGAGACGGAGAT
CAAGATTTGTATCACGTATGTGGAAACCGTTCTTGAGATTGCGTGCGTAG
GGAGACTTGTTTAGAAACAGCGCTCAACGGAAATTTCCTCCAGTATGAAT
CGCACGTCCCTTCCCACGAGTCATGTTTGATGGAACAACGCTTGAAACCA
GCCGCAATCCACTTGCTCCCTTACAAAGTTCAAACCTTCTCCAATCGAAC
GGCCCGTGTGTTTTTATCCTTTCCCGTTCCCCCCTTGGTGTCGATGACCT
CGTGCTCCAGAGAAAGAAAGGCAGAGGCGCGCCGGCACGCGCAGAGCCTG
CGAGCGCTCGAGTTCAGCAAGGAGGTCAGTCCCTGGTTTAAGGCCAACAA
CCTGTAACTTCAAGGACTGGTAAAGAATGGCTCACAGATACCATGGACGG
CACCCGCGAGGCCCAGAAAGCGATACCAGATGTAGGCAACCAATGATCCC
GGCGAAAGAATCCCGTTGCGCCGCCTTTCTTTGCCTCCCCAACCCCTCGC
GGCCGCGGAATGAAGCCCATTGAATTCGCACTGGCAAAATATAGGTTGAG
ACCGAAAATCTGAGGCAACACTGCGAGCAGCTCGTACAAGCGGAAGCCGA
AGGGCGAGCTCTGACCAAGGCGAAGCTGGATAACCTCAGGGCTCGCCGGG
ATCGAGAGGTATTTGTTGCATTCTCCAACAAGTTGCGCGCCTCGCAGCCT
TGCCCTAAGGATCGCTATGTATGTACGAGGTCTAACCGATCTTGCCGACA
GAATTAGTCTATTGAGTAGCTGGTATGTGCCACGCTGCGACCTACAGCGG
TGCAACTCTTAGGTTCGTGCGCACCCCTGCTTTGGATTGGAACGCCTTGC
GAAACGAGAATTTCTTTGCGTGGCTTAGAAATTTTGTTTCTTGACATGGT
AGCGAATCGAATGTTATGTAGCACAACGCTATGTGCCACCTTGACGTACT
GAATGACGACTGCGACGACGATGGTTTCTTTTGCCATTGTCGCTGTTGTC
ATCACCTTGGAATAAGTCTACACAACAGTACCTCTTCCTCCGAGCTCCGG
AAGGCAAAGCAAAGCATGTTCTATCGTCACATACCCAAAACAAGGTAAGG
AGAAATCTATGAAGGCCCAGGCAAGATCCGATCACTTTCGGAGAAGGACA
GTTCTTAGACAACAGGTTCAATCACAGGAAAAAACAGGGCAAGGTACGAA
ATTCGCCAACAAATAAAGTAGAGTTTGTCGTTCTGACTCCGAAAGTTGAG
TCACAACAAACACACCACAGGTGTGGCACAAACCAAACTGAACATGAGGA
AGTTATTTATCCTCGAACCCGCACGAATCTGGGCAGTGTTCATCGTCGGG
TGATGGTCTCGTGCAACCCAAATAGCCCCACTTAACGAGAAGGGTTAAAC
ACAACAAGTCATACATCATAAAAACAAGACAGCACGTAGTCGTGCCTTCT
ATATTTTGGTTGCTGCGCATGACTTCACGGGGATGGAAACGTCCTTTTCA
AAACCATGAAGTGCTGCCGAAGCCGCTCATTTAAGAGGATAACAGAATCA
GGGAAAGTAACCCATAACTACGTAACCCCGACTTCATCCCCGCCTCTTCC
TCCGCACTACGTGTCGAATCGACGCTCGGTAGCCATGGCACAAACGTAGA
GCAATGAACGCAACATTGGCGAGTGAGTGCAGCCAAAATTTAGGATGTCT
TTGTGAAGCCAACGACCCCACCCGCCCCCCCCCTGCTATCCAGCCTCCAA
CCGTGATCATCACTGCTTCGGTAAATGCAACCAGGTGAGGGAGTTGTCGG
TAGAGCTCCTCCTCCTTCACGATCACGCCTTGTCGTTGCACGAGACAATC
CGCTCGGCCGACTTGGCTCCTTCCTCCTCCTGCGAAGCAATCTCAACGCT
CGCCGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13919:209..4565+

>mRNA_Ecto-sp13_S_contig13919.3061.1 ID=mRNA_Ecto-sp13_S_contig13919.3061.1|Name=mRNA_Ecto-sp13_S_contig13919.3061.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1197bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13919:209..4565+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCAACCTCGTTGACCTCGCCGGGAGCGAGCGGCTGAAGAAGAGTGC
GTCGGAAGGCCAGCGGAAGACAGAGGCCCTCCACATCAACTCGTCTCTCA
CGGCGCTGGGCAAGGTAGTGATGGCCCTGGACCCCAGCTCGGGACTGACC
CACATCCCCTACCGAGACTCCAAACTCACTCGCCTGCTCCAGAACTCCTT
GGGGGGCAACAGCTTTACGGTGGTGCTGGCGACGGTGCATCCTATCGCTC
GCAGGTCACGACTCGGCCACGGGGGCATGGGAGCCGACGGCCTTGGGGGG
GTCAGTGCAGAGGCAAACTCCCGCGTGTTGGCGGTGCTCGCACAGATGGG
ACTAGCAGACGCCATGCAGCTTCCCAACGGCTCCATCCGCCTCCCCGACG
GTCGCATCGTCGGGAGCTTCGGGCTCGACGGCGAAGGGAGCGGCGGCGAC
GCCAGCAACTCTATGGTAAGCGTTGGGGGGCCGGGGGCTGGGGGCGGCAG
GGGGGCATACGCGAGTGGAATCCTGAAGGGCGTGCCGCCAGGCGTGCGGA
CTATGGTACAGGGACTGGAGGGGGAAGTTCGCGGCCTCAAGAAGAAACTC
AAGGAGCGCAAGAAGGAGGTGATGAGTATCCAAGCCCAGCTCGAGGCGCG
GCGGGCGGTCTTCGTGGAGAGTGAAAAGGAATCGAAGAGGCGAGAGACAG
AGCTCGCGGAACAGCTTGCTGTTGTTCGCGCACAGGTATCCAAGGTCAGG
GCGGCGGCAGCTCGGACCAAGGAAGACCAGCTGAACACGGTGCTGGCAGG
GAGTCAGTCTCTCCTGAAGAGGCAGCGACGAATGCTCCTCAACGCAACGG
GACAATGTTGCGCCGAAGATGAGGAAGTCAGGGTTCAGGACGCCAGAGAA
AGAAAGGCAGAGGCGCGCCGGCACGCGCAGAGCCTGCGAGCGCTCGAGTT
CAGCAAGGAGGTTGAGACCGAAAATCTGAGGCAACACTGCGAGCAGCTCG
TACAAGCGGAAGCCGAAGGGCGAGCTCTGACCAAGGCGAAGCTGGATAAC
CTCAGGGCTCGCCGGGATCGAGAGGTGAGGGAGTTGTCGGTAGAGCTCCT
CCTCCTTCACGATCACGCCTTGTCGTTGCACGAGACAATCCGCTCGGCCG
ACTTGGCTCCTTCCTCCTCCTGCGAAGCAATCTCAACGCTCGCCGGT
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