mRNA_Ecto-sp13_S_contig13916.3058.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI) HSP 1 Score: 494 bits (1273), Expect = 8.760e-169 Identity = 245/304 (80.59%), Postives = 255/304 (83.88%), Query Frame = 1
Query: 196 TPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVQLDDGVS-----GGICGMAGVACMVLG------------------GSLTYLHDRWACTASYHDIYWTTGDGASQTDPENHGQDTTNLLGSMMRISVPSDGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVECGNNYGWSRFEGSRCQEAQESRDGPCLDADRSTFTFPIYEYCHPDYSSDDADEADFVAGVDICGTSMVTGTAVIG 1038
TPDSSMYWLVGQAGEIKMVD+DDLS MTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTV+LDDG + AG L G + + + ASYHDIYWTTGDGASQTDPENHGQDTTNLLGS+MRISVP+DGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTL+EEIDIVECGNNYGWSRFEGSRCQEAQESRDGPCLD DRS FTFPIYEYCHPDYSSDDADEADFVAGVDICGT MV+GTAVIG
Sbjct: 119 TPDSSMYWLVGQAGEIKMVDLDDLSTMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVELDDGENQRNRLSKFQYFAGDPAFTLASEEVLLTSAPKIGSIHSAGWVGFQPSAYGTIASYHDIYWTTGDGASQTDPENHGQDTTNLLGSVMRISVPADGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLVEEIDIVECGNNYGWSRFEGSRCQEAQESRDGPCLDTDRSAFTFPIYEYCHPDYSSDDADEADFVAGVDICGTRMVSGTAVIG 422
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI) HSP 1 Score: 390 bits (1003), Expect = 6.260e-128 Identity = 205/372 (55.11%), Postives = 237/372 (63.71%), Query Frame = 1
Query: 1 VSACNEQITFPTYDGGDDYCTKHTGGGEDQFWSYPYTESDIFASGLTQVFDSQDDF--PSSTIGLYQTPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVQLDDG------------VSGGICGMAGVACMVLGGSLTY--LHDR-WAC-------TASYHDIYWTTGDGASQTDPENHGQDTTNLLGSMMRISVPSDGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVECGNNYGWSRFEGSRCQEAQESRD-GPCLDA-DRSTFTFPIYEYCHPDYSSDDADEADFVAGVDICGTSMVTGTAVIG 1038
V C I FPTYD G YC HTGGG D FWSYPY E +IF GL +VF D P T+ + QTPD S +WL+G AGEI VD D++ V+D+S ++ G YVDYEEGLL +AF P+FS GYP YFY+SYTV L+D + G G ++L Y +H W +S D+YWTTGDG QTDPENH QDT +LG+MMRI+VPSDG GY IP+GN AL EICA GFRNPWRCSFDRE D LYCGDVGHT +EEID+VECGNNYGWSRFEGSRCQEA E + P D RS FTFP+YEYCHPDY S DE F AG DICG ++ G AVIG
Sbjct: 117 VDECAAYIEFPTYD-GTSYCDHHTGGGNDFFWSYPYEEPEIFEPGLNEVFPDLGDGEQPDDTVSVRQTPDGSQWWLLGIAGEIYAVDSDNMDDSELVIDVSGSVTGGTFYVDYEEGLLDVAFGPMFSESGYPNYFYVSYTVDLNDDLMQRNRLARFTYIPGDPEGTKASEEVLLTTVPKYNSIHSAGWLGFKPSVYGNSSPQDLYWTTGDGGPQTDPENHSQDTQTMLGAMMRITVPSDGDGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRENDNLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVEDNEFNPACDGISRSGFTFPLYEYCHPDYQSTGDDE--FTAGNDICGDRVLLGNAVIG 485
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE) HSP 1 Score: 370 bits (951), Expect = 1.010e-122 Identity = 198/372 (53.23%), Postives = 234/372 (62.90%), Query Frame = 1
Query: 1 VSACNEQITFPTYDGGDDYCTKHTGGGEDQFWSYPYTESDIFASGLTQVFDSQDDF--PSSTIGLYQTPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVQLDDG------------VSGGICGMAGVACMVLGGS--LTYLHDR-WAC-------TASYHDIYWTTGDGASQTDPENHGQDTTNLLGSMMRISVPSDGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVECGNNYGWSRFEGSRCQEAQESRD--GPCLDADRSTFTFPIYEYCHPDYSSDDADEADFVAGVDICGTSMVTGTAVIG 1038
V AC I FPTYDG YC HTGGG D FWSYPY E +IF GL ++F D PS T+ + Q VD D++ + V+D+S ++ G YVDYEEGLL +AF P+FS YP YFY+SYTV L+DG + G G ++L + T +H W AS D+YWTTGDG QTD NH QDT ++LG+MMRI+VPSDG+GY IP+GN AL EICA GFRNPWRCSFDRETD+LYCGDVGHT +EEID+VECGNNYGWSRFEGSRCQEA E+ + PC DRS FTFP+YEYCHPDYSS DE F AGVDICG ++ G AVIG
Sbjct: 72 VDACAAYIDFPTYDGVS-YCDHHTGGGADFFWSYPYEEPEIFEPGLNELFPDLGDGEQPSDTVSMRQ------------------VDSDNMDDSSLVIDVSGSVTDGTFYVDYEEGLLDVAFGPMFSESDYPNYFYVSYTVDLNDGEVQRNRLARFTYIPGDPAGTKASEEVLLTSAPKSTSIHSAGWLGFKPSVYGNASPQDLYWTTGDGGPQTDYNNHAQDTQSMLGAMMRITVPSDGSGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRETDDLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVENNEYNPPCDGVDRSGFTFPLYEYCHPDYSSVGDDE--FTAGVDICGDRVLLGNAVIG 422
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI) HSP 1 Score: 340 bits (873), Expect = 1.080e-111 Identity = 176/351 (50.14%), Postives = 220/351 (62.68%), Query Frame = 1
Query: 1 VSACNEQITFPTYDGGD-DYCTKHTGGGEDQFWSYPYTES---DIFASGLTQVFDSQDDFPSSTIGLYQTPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGL-SSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVQLDDG------------VSGGICGMAGVACMVL-----------GGSLTYLHDRWACTASYHDIYWTTGDGASQTDPENHGQDTTNLLGSMMRISVPSDGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVECGNNYGWSRFEGSRCQEAQESRD--GPCLDADRSTFTFPIYEYCHPDYSSDD 963
V+AC+ QI FPTYD G DYCTKHTGGG+D FWSYPY E+ D+++ + ++ P T+ + QTPD S +WL+G +G+I V+ D + V+ ++ + S G YVD+EEGLL +AF P+F + YP YFY+SYTV LDDG V G ++L G L + + Y D+YWTTGDG QTDP NH QD T +LG+MMRISVP+DGTGY IP GN + EICA G RNPWRCSFDR D+LYCGDVG EEI++VECGNNYGWSRFEGSRCQEA + + PC DRS FTFP++EYCHPD+ S D
Sbjct: 43 VTACDGQIDFPTYDSGTVDYCTKHTGGGDDLFWSYPYEEAVTCDLYSKLFPDL--GANEQPDDTVSMRQTPDGSQWWLLGISGQIYAVNSDSMDESELVIHVAGPVPSGGSFYVDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDDGENQRNRLARFTYVPGDAAATRASEEVLLTTVPRFISVHAAGWLGFKPSAYG-NPGYQDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPPGNYHG-SKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISAEEINLVECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTFPLFEYCHPDFDSTD 389
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE) HSP 1 Score: 315 bits (806), Expect = 3.580e-101 Identity = 172/366 (46.99%), Postives = 209/366 (57.10%), Query Frame = 1
Query: 1 VSACNEQITFPTYDGGD-DYCTKHTGGGEDQFWSYPYTESDIFASGLTQVFDSQDDFPSSTIGLYQTPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGL-SSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVQLDDGVSGGICGMAGVACMVLGGSLTYLHDRWACTASYHDIYWTT----------------GDGASQTDPENHGQDTTNLLGSMMRISVPSDGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVECGNNYGWSRFEGSRCQEAQESRD--GPCLDADRSTFTFPIYEYCHPDYSSDDADEADFVAGVDICGTSMVTGTAVIG 1038
V+AC+ QI FPTYD G DYCTKHTGGG+D FWSYPY E + +G ++ S +W V+ D + V+D++ + S G Y D+EEGLL + F P+FS YP+YFY+SYTV LDDG +A TY+ T + ++ TT TDP NH QD T +LG+MMRISVPSDGTGY IP GN A E+CA G RNPWRC FDR D LYCGDVGHTL+EEI+++ECGNNYGWSRFEGSRCQEA + + PC DRS FT+P++EYCHPDY S DADE +F G D CG V G VIG
Sbjct: 41 VTACDGQIEFPTYDSGSVDYCTKHTGGGDDFFWSYPYKERSL--TGFLFLW-------------------SRWW----------VNSDSMDSSELVIDVAGPVPSGGNFYDDFEEGLLDVVFGPMFSVPSYPSYFYVSYTVLLDDGEM----QRNRLA------RFTYVPGDPVATRATEEVLLTTVPKYNSIHSAGWLGFKPSDYGSTDPGNHSQDETTMLGAMMRISVPSDGTGYTIPPGNYPG-AKAEVCAIGLRNPWRCGFDRLNDNLYCGDVGHTLVEEINLIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTYPLFEYCHPDYDSTDADEQEFTGGADTCGDRFVVGNCVIG 364
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI) HSP 1 Score: 265 bits (677), Expect = 1.060e-80 Identity = 156/366 (42.62%), Postives = 187/366 (51.09%), Query Frame = 1
Query: 1 VSACNEQITFPTYDGGD-DYCTKHTGGGEDQFWSYPYTESDIFASGLTQVFDSQDDFPSSTIGLYQTPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGL-SSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVQLDDG------------VSGGICGMAGVACMVL-----------GGSLTYLHDRWACTASYHDIYWTTGDGASQTDPENHGQDTTNLLGSMMRISVPSDGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVECGNNYGWSRFEGSRCQEAQESRD--GPCLDADRSTFTFPIYEYCHPDYSSDDADEADFVAGVDICGTSMV 1017
V+AC+ QI FPTYD G DYCTKHTG G GL V V G ++ V++D + V+D++ + S G Y D+EEGLL +AF P+F + YP YFY+SYTV LDDG V G ++L G L + + + Y D+YWTTGDG QTDP NH Q DGTGY IP GN A EICA G RNPWRCSFDR D+LYCGDVG +EEI+ +ECGNNYGWSRFEGSRCQEA + + PC RS FTFP++EYCHPD+ S DADE F G D CG V
Sbjct: 12 VTACDGQIDFPTYDSGTVDYCTKHTGRG----------------GGLILV-------------------------VPLRGSMRQVNLDSMDESELVIDVAGPVPSGGSFYGDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDDGENQRNRLARFTYVPGDAAATRASEEVLLTTVPKYNSVHSAGWLGFKPSAYG-SPGYQDLYWTTGDGGPQTDPFNHSQ----------------DGTGYTIPPGNYHG-AKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGISRSGFTFPLFEYCHPDFDSTDADEQKFTGGADTCGNRFV 318
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI) HSP 1 Score: 259 bits (662), Expect = 1.760e-75 Identity = 151/351 (43.02%), Postives = 185/351 (52.71%), Query Frame = 1
Query: 1 VSACNEQITFPTYDGGD-DYCTKHTGGGEDQFWSYPYTESDIFASGLTQVFDSQDDF--PSSTIGLYQTPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVQLDDGVSGGICGMAGVACMVLGGSLTYLHDRWACTASYHDIYWTTGDGASQTDPENHGQDTTNLLGSMMRISVPSDGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVECGNNYGWSRFEGSRCQEAQESRD--GPCLDADRSTFTFPIYEYCHPDYSSDDADEADFVAGVDICGTSMVTGTAVIG 1038
++AC QI FPTYD DYCTKHTGGG+D FWSYPY E+ L +VF D P T+ + QTPD S +WL+G SG++Y GLL LAF P+F D YP YFY+SYTV LDDG + +A TY+ T + ++ TT P+ + + LG + SV EICA G RNPWRCSFDR D+LYCGDVG +EEI+ +ECGNNYGWSRFEGSRCQEA + + PC DRS FT+P++EYCHPD+ S DADE +F G D CG V G VIG
Sbjct: 120 LTACGGQINFPTYDNNTVDYCTKHTGGGDDFFWSYPYEEAISDPRFLNEVFPDLGDNQQPDDTVSMRQTPDGSQWWLLG--------------------------ISGQIYA----GLLDLAFGPMFGDDSYPQYFYVSYTVLLDDGEN----QRNRLA------RFTYVPGDPVATRATEEVLLTTV-------PKYNSVHSAGWLG--FKPSVYGSA----------------EICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSDFTYPLFEYCHPDFDSTDADEQEFTGGADTCGNRFVVGNCVIG 405
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI) HSP 1 Score: 246 bits (629), Expect = 1.750e-70 Identity = 154/385 (40.00%), Postives = 204/385 (52.99%), Query Frame = 1
Query: 1 VSACNEQITFPTYDGGDDYCTKHTGGGEDQ-----FWSYPYTESDIF-ASGLTQVFDS--QDDFPSSTIGLYQTPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTV----QLDDGVS---------GGICGMAGVACMVL-----------GGSLTYLHDRWACT-ASYHDIYWTTGDGASQTDPENHGQDTTNLLGSMMRISVPSD--GTGYEIPTGNL---ASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVECGNNYGWSRFEGSRCQEAQESRDG-PCLDADRSTFTFPIYEYCHPDYSSDDADEADFVAGVDICGTSMVTGTAVIG 1038
V AC + YC +H D+ +WSYP + F + +T F ++D P I + TPD S +W+ G G IKM D + V+DIS YE+GLLG AFSP F+ G FY+SY+V ++G++ G + +G ++L G + + +A +YHDIYWT GDG Q DP+N QD TNL GS++RISVPS GTGYEIP GN A+ PEICA G RNP RC+FD TDELYCGDVG +EE++++ECG +YGW FEGSRC + E DG C DR+ + FP++EYCH DY D+ + +F D CG VTG +VIG
Sbjct: 125 VMACGTDLALDAT-----YCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEDLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRAD-----FSYEQGLLGFAFSPSFTETGL---FYVSYSVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHDIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPAGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVFEYCHVDY---DSSQEEF----DACGDRTVTGLSVIG 489
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 227 bits (578), Expect = 2.970e-64 Identity = 119/260 (45.77%), Postives = 154/260 (59.23%), Query Frame = 1
Query: 112 ESDIFASGLTQVFD--SQDDFPSSTIGLYQTPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGL-SSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVQLDDGV-------------SGGICGMAGVACMVL----------GGSLTYLHDRWACTASYHDIYWTTGDGASQTDPENHGQDTTNLLGSMMRISVPSDGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVE 813
+++IF GL +VF + D P T+ + QTPD S +WL+G +G+I VD D + V+D+S + S G Y D+EEGLL +AF P+F + YP YFY+SYTV LDDG + A ++ G L + + Y D+YWTTGDG QTDP NH QD T +LG+MMRISVP+DGTGY IP+GN A E+CA G RNPWRC FDR D+LYCGDVGHTL+EEI+ +E
Sbjct: 106 DAEIFEPGLNEVFPDLADDQQPGDTVSMRQTPDGSQWWLLGISGQIYAVDSDSMDESELVIDVSGPVPSGGNFYDDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDDGEMQRNRLAKFTYFPEDPVATRASEEVLLTTVPKYNSIHSAGWLGFKPSDYG-NPGYSDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPSGNYPG-AKAEVCAIGLRNPWRCGFDRLNDDLYCGDVGHTLVEEINFIE 363
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE) HSP 1 Score: 206 bits (524), Expect = 5.070e-56 Identity = 137/375 (36.53%), Postives = 180/375 (48.00%), Query Frame = 1
Query: 10 CNEQITFPTYDGGDDYCTKHTGGGEDQFWSYPYTESDIFAS-GLTQVFDSQDD--FPSSTIGLYQTPDSSMYWLVGQAGEIKMVDVDDLSVMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVQLDDGVSGGICGMAGVACMVLGGSLTYLHDRWACTAS----------------------------YHDIYWTTGDGASQTDPENHGQDTTNLLGSMMRISVPSD-GTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLIEEIDIVECGNNYGWSRFEGSRC-QEAQESRDGPCLDADRSTFTFPIYEYCHPDYSSDDADEADFVAGVDICGTSMVTGTAVI 1035
C Q+ P DYC H G DQ+WSYP D F++ GL + F D P + + TPD S +W++G G+I VDV D + TV+D+SS + +EEGLL +AFSP F T G FY SY +G S G ++ + T + T+S H+++W GD Q D + GQD L GS++RI V S+ G+G + G RNP+RCSFDR D+LYCGDVGH +E I +ECGNNYGW +FEG RC Q+ ++ C DRS FTFP + YCHPD+ D V+ ICG V GTAVI
Sbjct: 34 CATQLGLPA-----DYCVVHAGPEGDQYWSYPLVIDDSFSTDGLVKAFPDLSDSLIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADATWAKTVLDMSS-----LVLWTFEEGLLSMAFSPAFHTTGV---FYASYV----NGPSFGTNRLSRFKYDPDSAANTLASEEILITSSEKKSNVHSAGWIGFKPSSYGNDAVSAGAVHELFWAMGDSGPQLDTSDRGQDPNILHGSIIRIEVSSEMGSGDK----------------EGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFNYCHPDFYPVDHPSY-IVSDQSICGDRSVIGTAVI 374 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13916.3058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13916.3058.1 >prot_Ecto-sp13_S_contig13916.3058.1 ID=prot_Ecto-sp13_S_contig13916.3058.1|Name=mRNA_Ecto-sp13_S_contig13916.3058.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp VSACNEQITFPTYDGGDDYCTKHTGGGEDQFWSYPYTESDIFASGLTQVFback to top mRNA from alignment at Ecto-sp13_S_contig13916:55..4566- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13916.3058.1 ID=mRNA_Ecto-sp13_S_contig13916.3058.1|Name=mRNA_Ecto-sp13_S_contig13916.3058.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4512bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13916:55..4566- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13916:55..4566- >mRNA_Ecto-sp13_S_contig13916.3058.1 ID=mRNA_Ecto-sp13_S_contig13916.3058.1|Name=mRNA_Ecto-sp13_S_contig13916.3058.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1038bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13916:55..4566- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |