prot_Ecto-sp13_S_contig13897.3043.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13897.3043.1
Unique Nameprot_Ecto-sp13_S_contig13897.3043.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: D7G690_ECTSI (NOT2_3_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G690_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 3.070e-69
Identity = 105/115 (91.30%), Postives = 108/115 (93.91%), Query Frame = 0
Query:    4 QVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADGNVPPNVDYIYFDHNEWQR 118
            +VLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA      YAAQELHAREWRFQSV+KLW KRVGPADGNVPPNV+YIYFDHNEWQR
Sbjct:  392 EVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA------YAAQELHAREWRFQSVLKLWFKRVGPADGNVPPNVEYIYFDHNEWQR 500          
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: A0A6U3ZWB8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZWB8_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.410e-41
Identity = 72/116 (62.07%), Postives = 85/116 (73.28%), Query Frame = 0
Query:    6 LYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADG---NVPPNVDYIYFDHNEWQR 118
            LY++FASPW+E P T EPQ+ LP CYY+QPP LK  HL  FQLETLFYIFY++P+DVLQA      YAAQEL++REWR+   +KLW KR GPADG   N    V YIYFD N W+R
Sbjct:  342 LYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA------YAAQELYSREWRYHVELKLWFKRAGPADGVANNAGSGVQYIYFDINSWER 451          
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: A0A836CGQ9_9STRA (NOT2_3_5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.040e-41
Identity = 68/115 (59.13%), Postives = 82/115 (71.30%), Query Frame = 0
Query:    4 QVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADGNVPPNVDYIYFDHNEWQR 118
            +VLYA+FA PWAE P++ EPQF LP CYY+QPP LK  H   F LETLFYIFY+MP D+LQA      YAAQEL+ R+WRF + +KLWLKR   AD      V +I+FDHN W+R
Sbjct:   59 EVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQA------YAAQELYLRDWRFHADLKLWLKRATAADSAA--QVRFIFFDHNVWER 165          
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: A0A7S2EBZ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBZ5_TRICV)

HSP 1 Score: 144 bits (364), Expect = 4.120e-39
Identity = 69/116 (59.48%), Postives = 83/116 (71.55%), Query Frame = 0
Query:    6 LYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADG---NVPPNVDYIYFDHNEWQR 118
            LY++FASPW+E P T EPQ+ LP CYY+QPP LK  HL  FQLETLFYIFY++P+DVLQA      YAAQEL++REWR+   +KLW KR GP+DG          YIYFD N W+R
Sbjct:  299 LYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPRDVLQA------YAAQELYSREWRYHVDLKLWFKRAGPSDGLTATANGGNQYIYFDVNTWER 408          
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: A0A7S0C8Q4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8Q4_9STRA)

HSP 1 Score: 141 bits (356), Expect = 6.510e-39
Identity = 65/113 (57.52%), Postives = 80/113 (70.80%), Query Frame = 0
Query:    6 LYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADGNVPPNVDYIYFDHNEWQR 118
            LY++FASPW++ P T EPQ+ LP CYY+QPP LK  HL  FQLETLFYIFY++P+DVLQA      YAAQEL++R+WR+   +KLW KR  P D        YIYFD N W+R
Sbjct:  186 LYSTFASPWSDSPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA------YAAQELYSRDWRYHVDLKLWFKRASPVDVPNANGTQYIYFDINSWER 292          
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: A0A7R9W176_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W176_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.010e-38
Identity = 68/116 (58.62%), Postives = 83/116 (71.55%), Query Frame = 0
Query:    6 LYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADG---NVPPNVDYIYFDHNEWQR 118
            LY++FASPW+E P T EPQ+ LP CYY+QPP LK  HL  FQLETLFYIFY++P+DVLQA      YAAQEL++REWR+   +KLW KR G +DG        + YIYFD N W+R
Sbjct:  293 LYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA------YAAQELYSREWRYHVDLKLWFKRGGASDGLAATANGGIQYIYFDVNTWER 402          
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: A0A7S2YKN9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YKN9_9STRA)

HSP 1 Score: 132 bits (332), Expect = 9.280e-37
Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    1 GREQVLYASFASPWAEEPATP---EPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADGNVPPNV-----DYIYFDHNEWQR 118
            G  + +Y++F+SPW+   +T    +P + LPSCYY+QPP LK  HL  FQLETLFYIFY++P+DVLQA      Y+AQEL++REWR+   +KLW KR GP+DG    +       Y+YFD N W+R
Sbjct:   42 GSAEHIYSTFSSPWSSTDSTQPTKDPHYQLPSCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA------YSAQELYSREWRYHGELKLWFKRAGPSDGLAASSAASAAGQYLYFDINTWER 161          
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: B7FQW3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQW3_PHATC)

HSP 1 Score: 138 bits (348), Expect = 1.390e-36
Identity = 64/121 (52.89%), Postives = 85/121 (70.25%), Query Frame = 0
Query:    1 GREQVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADG---NVPPNVDYIYFDHNEWQR 118
            G  + +Y++F+SPW++  AT EP + LP CYY+QPP LK  HL  FQLETLFYIFY++P+DVLQA      YAAQEL++REWR+   +KLW KR  P+DG   +   +  Y+YFD N W+R
Sbjct:  322 GSTEQIYSTFSSPWSDNVATKEPHYQLPVCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA------YAAQELYSREWRYHGELKLWFKRASPSDGVSSSSSGSPQYLYFDINSWER 436          
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: A0A7S2XLH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLH6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 4.870e-36
Identity = 65/116 (56.03%), Postives = 81/116 (69.83%), Query Frame = 0
Query:    6 LYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADG---NVPPNVDYIYFDHNEWQR 118
            LY++FA PW+E P T EPQ+ LP CYY+QPP LK  HL  F LETLFYIFY++P+DVLQA      YAAQEL++REWR+   +KLW KR GP DG   N      +++FD N W+R
Sbjct:  349 LYSTFAGPWSENPTTREPQYQLPMCYYMQPPALKTGHLSKFALETLFYIFYALPKDVLQA------YAAQELYSREWRYHVDLKLWFKRAGPNDGVGNNGGAGNQFLFFDINTWER 458          
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Match: A0A8J2SZ99_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ99_9STRA)

HSP 1 Score: 138 bits (347), Expect = 7.150e-36
Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = 0
Query:    4 QVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPM-------HLKNFQLETLFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADGNVPPNVDYIYFDHNEWQ 117
            + LY++FASPWAE P T EPQF+LP CYY+QPPPLK         HL  FQLETLFYIFY+MP+DVLQA      YAAQEL+ REW++   +KLW KR   ADG    N  YI+FD   W+
Sbjct:  439 ECLYSTFASPWAEAPITREPQFSLPLCYYMQPPPLKTQYLSQNKSHLSKFQLETLFYIFYAMPKDVLQA------YAAQELYNREWQYHQDLKLWFKRSSSADGLNFSNNQYIFFDIKTWE 553          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13897.3043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G690_ECTSI3.070e-6991.30NOT2_3_5 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6U3ZWB8_9STRA1.410e-4162.07Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A836CGQ9_9STRA5.040e-4159.13NOT2_3_5 domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2EBZ5_TRICV4.120e-3959.48Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0C8Q4_9STRA6.510e-3957.52Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7R9W176_9STRA2.010e-3858.62Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2YKN9_9STRA9.280e-3750.00Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7FQW3_PHATC1.390e-3652.89Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2XLH6_9STRA4.870e-3656.03Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A8J2SZ99_9STRA7.150e-3657.02Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007282NOT2/NOT3/NOT5, C-terminalPFAMPF04153NOT2_3_5coord: 9..117
e-value: 3.2E-20
score: 72.6
IPR038635CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamilyGENE3D2.30.30.1020coord: 1..118
e-value: 7.9E-32
score: 112.1
IPR040168Not2/Not3/Not5PANTHERPTHR23326CCR4 NOT-RELATEDcoord: 5..118
NoneNo IPR availablePANTHERPTHR23326:SF3CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2coord: 5..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13897contigEcto-sp13_S_contig13897:677..1284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13897.3043.1mRNA_Ecto-sp13_S_contig13897.3043.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13897 677..1284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13897.3043.1 ID=prot_Ecto-sp13_S_contig13897.3043.1|Name=mRNA_Ecto-sp13_S_contig13897.3043.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
GREQVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLET
LFYIFYSMPQDVLQASSLFLAYAAQELHAREWRFQSVMKLWLKRVGPADG
NVPPNVDYIYFDHNEWQR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007282NOT2/3/5_C
IPR038635CCR4-NOT_su2/3/5_N_sf
IPR040168Not2/3/5