mRNA_Ecto-sp13_S_contig13872.3028.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI) HSP 1 Score: 253 bits (646), Expect = 5.180e-79 Identity = 148/203 (72.91%), Postives = 154/203 (75.86%), Query Frame = 1
Query: 1 HFRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPNTGTSPNDTEVPSPSSPCGVLGPVRRLSLVGRMLLSSSLGPARASLSSAAPPDASTGGGERGRGLGDNNGSRSTQDEEKGRDEDGEMAVVKTGGGNXXXXXXXXGGTS 609
+F QAATMRIVDQ+IREGAPDQVNISGECRD+ILSTH TA+DIFDRARAEVLDVMETNFQTDFVETEGFRRIV+AAELEQRQIRLLQAEGFLLPNTGTSP DTEV SPSSP GVLGP RRLSLVGRML SSS+GPAR SLSSAAP DA TG MAV KTGGGN GGTS
Sbjct: 290 YFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVNAAELEQRQIRLLQAEGFLLPNTGTSPTDTEVLSPSSPDGVLGPFRRLSLVGRMLFSSSVGPARTSLSSAAPQDAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAVAKTGGGNVPGGGGEGGGTS 492
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI) HSP 1 Score: 166 bits (421), Expect = 6.700e-46 Identity = 97/154 (62.99%), Postives = 118/154 (76.62%), Query Frame = 1
Query: 1 HFRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPNTGTSPNDTEVP-SPSSPCG-VLGPVRRLSLVGRMLLSSSLGPARASLSSAAPPDASTG 456
+F QAATMRIV+Q+IREG+PDQVNISGECR++ILST TA+DIFDRARAEVL VMETNFQ DF+ETEGFRRIVDA+ELEQRQ+RLL+AEG L+P+ T+P P S SP G +L RRL LVGR+ SS ++S ++ P A +G
Sbjct: 287 YFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFIETEGFRRIVDASELEQRQMRLLRAEGVLVPSASTTPVRLAAPPSIFSPRGRLLDSCRRLPLVGRLFSFSSPSAVAHAVSRSSTPGAGSG 440
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: A0A6H5K0N5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N5_9PHAE) HSP 1 Score: 163 bits (413), Expect = 3.730e-45 Identity = 92/135 (68.15%), Postives = 109/135 (80.74%), Query Frame = 1
Query: 1 HFRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPNTGTSPNDTEVP-SPSSPCG-VLGPVRRLSLVGRMLLSSS 399
+F QAATMRIV+Q+IREG PDQVNISGECR++ILST TA+DIFDRARAEVL VMETNFQ DFVETEGFRRIVDA+ELEQR++RLL+AEG L+P+ T+P P S SP G ++ +R L LVGR+ SSS
Sbjct: 236 YFARQAATMRIVEQYIREGGPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFVETEGFRRIVDASELEQREMRLLRAEGVLVPSASTTPVRLAAPRSIFSPRGRLVDSLRCLPLVGRLFSSSS 370
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: D7FU02_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU02_ECTSI) HSP 1 Score: 148 bits (374), Expect = 6.020e-42 Identity = 77/101 (76.24%), Postives = 86/101 (85.15%), Query Frame = 1
Query: 1 HFRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPNTGTSP 303
+F QA TMRIV Q+IREGAPDQVNISGECR++ILST TA+DIFDRAR EVL VMETNFQ +FVETEGFRRIVDAAELEQR+ RLL+A GFL P+ SP
Sbjct: 72 YFTRQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPDAPPSP 172
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: D7FU07_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU07_ECTSI) HSP 1 Score: 148 bits (373), Expect = 3.080e-41 Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 1
Query: 1 HFRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLL----PNTGTSPNDTEVPSPSSPCGVLGPVRRLSLV-GRMLLSSS 399
+F QAATMRIVDQ+IREGA +QVNISG CR++ILST TA+DIFD ARAEVL +METNFQ DFVETEGFRRI DA+ LEQ++IRLL+ EGFL+ P + P + V P S G+L R SLV GR+L SSS
Sbjct: 82 YFPRQAATMRIVDQYIREGAAEQVNISGRCREEILSTDVTAYDIFDHARAEVLALMETNFQQDFVETEGFRRIADASALEQQEIRLLRKEGFLVADASPTLNSPPPASSVTPPQS--GLLNKFTRFSLVVGRILPSSS 217
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE) HSP 1 Score: 149 bits (375), Expect = 3.420e-39 Identity = 76/100 (76.00%), Postives = 87/100 (87.00%), Query Frame = 1
Query: 1 HFRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPNTGTS 300
+F QA TMRIV Q+IREGAPDQVNISGECR++ILSTH TA+DIFDRAR EVL VMETNFQ +FVETEGFRRIV+A+ELEQR+ RLL+A GFL P+T S
Sbjct: 355 YFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTHVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVEASELEQRENRLLRAGGFLPPDTPPS 454
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: D7FIR7_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR7_ECTSI) HSP 1 Score: 132 bits (333), Expect = 5.230e-33 Identity = 72/114 (63.16%), Postives = 88/114 (77.19%), Query Frame = 1
Query: 4 FRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFL---LPNTGTSPNDTEVPSPSSP 336
F QAATMRIVDQ+I+EGA DQVN+SG CR+ IL+T TAFDIFD ARAEVL VMETNF+ DFV TEGFRRI++A++ EQR++RLL+A G L P+ G+S D S +SP
Sbjct: 73 FERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLPLGTPSPGSSSADKTPSSSASP 186
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE) HSP 1 Score: 134 bits (338), Expect = 6.660e-33 Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 1
Query: 4 FRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPNTGTSPNDT-EVPSPSS 333
F QAATMRIVDQ+I+EGA DQVN+SG CR+ IL+T TAFDIFD ARAEVL VMETNF+ DFV TEGFRRI++A++ EQR++RLL+A G LLP SP + E +PSS
Sbjct: 318 FERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLLPLGTPSPGSSYEDKTPSS 428
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI) HSP 1 Score: 130 bits (327), Expect = 2.020e-32 Identity = 67/100 (67.00%), Postives = 83/100 (83.00%), Query Frame = 1
Query: 4 FRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPNTGTSP 303
F QAATMRIV ++IR+GAP+QVNIS CR++I+ST+ TA+DIFDRARAEVL VME F+ +FVETEGFRRI +A+ELEQR+ RLL+A GFL P+T P
Sbjct: 329 FGRQAATMRIVARYIRDGAPEQVNISEACREEIVSTNVTAYDIFDRARAEVLAVMEAEFKAEFVETEGFRRIANASELEQREKRLLRAGGFLPPSTPPGP 428
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Match: D7FIS3_ECTSI (Similar to retinally abundant regulator of G-protein signaling hRGS-r n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS3_ECTSI) HSP 1 Score: 130 bits (327), Expect = 3.250e-32 Identity = 69/100 (69.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query: 4 FRFQAATMRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETNFQTDFVETEGFRRIVDAAELEQRQIRLLQAEGFLLPNTGTSP 303
F QAATMRIV+++IRE APDQVNIS ECR+ IL+T TA+DIFD ARAEVL VMETNFQ +FV TEGFRRI DA+E+E R+IRLL+A G +LP+ SP
Sbjct: 165 FERQAATMRIVERYIREDAPDQVNISEECREKILATDVTAYDIFDEARAEVLVVMETNFQREFVTTEGFRRIADASEVEHREIRLLRAGG-MLPSASPSP 263 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13872.3028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13872.3028.1 >prot_Ecto-sp13_S_contig13872.3028.1 ID=prot_Ecto-sp13_S_contig13872.3028.1|Name=mRNA_Ecto-sp13_S_contig13872.3028.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp MRIVDQFIREGAPDQVNISGECRDDILSTHATAFDIFDRARAEVLDVMETback to top mRNA from alignment at Ecto-sp13_S_contig13872:3261..4329- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13872.3028.1 ID=mRNA_Ecto-sp13_S_contig13872.3028.1|Name=mRNA_Ecto-sp13_S_contig13872.3028.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1069bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13872:3261..4329- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13872:3261..4329- >mRNA_Ecto-sp13_S_contig13872.3028.1 ID=mRNA_Ecto-sp13_S_contig13872.3028.1|Name=mRNA_Ecto-sp13_S_contig13872.3028.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=588bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13872:3261..4329- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |