mRNA_Ecto-sp13_S_contig13867.3023.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13867.3023.1
Unique NamemRNA_Ecto-sp13_S_contig13867.3023.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: D7FNU9_ECTSI (RNA binding / nucleic acid binding n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU9_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 8.930e-76
Identity = 156/166 (93.98%), Postives = 160/166 (96.39%), Query Frame = 1 
Query:    1 QTESDVITKKAGTYVPRDKRKLPSADSSNGNGLHQAAPAPAATTPGAAGAXXXXXXXXXXXXXXXXXXXXXXXXX---AVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPGGQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFARKA 489
            ++ESDV+TKKAGTYVPRDKRKLPSAD+SNGNGLHQAAPAPAATTPGA   XXXXXXXXXXXXXXXXXXXXXXXXX   AVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPGGQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFARKA
Sbjct:   87 KSESDVVTKKAGTYVPRDKRKLPSADASNGNGLHQAAPAPAATTPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPGGQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFARKA 252
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: A0A812XDE7_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XDE7_SYMMI)

HSP 1 Score: 100 bits (248), Expect = 4.700e-22
Identity = 68/164 (41.46%), Postives = 85/164 (51.83%), Query Frame = 1 
Query:    1 QTESDVITKKAGTYVPRDKRKLPSADSSNGNGLHQAAP-APAATTPGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPG--GQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFAR 483
            +T+SD++ KK GT+ PR KR      S+  +G   A P AP    P                               VP+P   + +VPH IL+A  LP E    ML  LF+QYPGF E RMAPG  G AFIEF D +QAGIAL  LNGF+LSA + LQL + +
Sbjct:    6 RTKSDIVAKKDGTFNPRQKRVREEQSSTMEDGGRTAPPPAPHKEFP----------------------------VVKVPKPI--MNNVPHRILFAQNLPDECNDQMLGALFQQYPGFQEVRMAPGKKGIAFIEFQDVVQAGIALQQLNGFQLSAADALQLTYGK 139
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: A0A812Y221_SYMMI (Snrpb2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y221_SYMMI)

HSP 1 Score: 100 bits (248), Expect = 3.460e-21
Identity = 66/163 (40.49%), Postives = 86/163 (52.76%), Query Frame = 1 
Query:    1 QTESDVITKKAGTYVPRDKRKLPSADSSNGNGLHQAAPAPAATTPGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPG--GQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFAR 483
            +T+SD++ KK GT+ PR KR      S+  +G  +AAP PA                                    P+P   + +VPH IL+A  LP E    ML+ LF+QYPGF E RMAPG  G AFIEF D +QAGIAL  L+GF+LSA + LQL + +
Sbjct:   85 KTKSDIVAKKDGTFNPRQKRVREEQSSAMEDGA-RAAPPPA--------------------------QYKEPPVAKTPKPI--VNNVPHRILFAQNLPDECNDQMLAALFQQYPGFQEVRMAPGKKGIAFIEFQDVVQAGIALQQLSGFQLSAADTLQLTYGK 218
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: A0A836CKH4_9STRA (U2 small nuclear ribonucleoprotein B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.450e-20
Identity = 84/162 (51.85%), Postives = 101/162 (62.35%), Query Frame = 1 
Query:    7 ESDVITKKAGTYVPRDKRKLPSADSSNGNGLHQAAPAPAATTPGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPGGQ--AFIEFADQMQAGIALNALNGFKLSATNPLQLAFARK 486
            +SDV+TKK GT+VPR+KRK              AA APAA          XXXXXXXX    XXXXXXXXXXX       P+   P N+L+A  LP E TQ MLS LF+QY GF+E RM PG Q  AFIEF D MQA +AL  L GFKL+ T+ L+L++A++
Sbjct:   42 QSDVVTKKTGTFVPREKRKRQEPPKPT------AAAAPAAAPVAPTPMVVXXXXXXXXQQLAXXXXXXXXXXXXXXXXXAPVNP-PSNVLFAENLPAECTQAMLSMLFQQYRGFTEVRMVPGKQGIAFIEFTDDMQASLALQGLAGFKLTPTDTLRLSYAKR 196
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: A0A662Y965_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y965_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.750e-18
Identity = 66/174 (37.93%), Postives = 85/174 (48.85%), Query Frame = 1 
Query:    7 ESDVITKKAGTYVPRDKRK------------LPSADSSNGNGLHQAAPAPAATTPGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPG--GQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFARK 486
            ++DVI ++ GT+VPR+KRK            LP A    G     AAP+P A  P                                P PA    +VPH IL+   LP    + MLS LF+QY GF E RM PG  G AF+EF D+ QA IAL  L GFKL+ T+ L+++FA+K
Sbjct:   98 KADVIARREGTFVPREKRKREPKPAADKATQLPGAKKQVGENGSAAAPSPVALPP--------------------------------PPPAQ---NVPHKILFLQELPESCNKEMLSVLFKQYHGFKEVRMVPGKKGLAFVEFGDEAQASIALQGLFGFKLTPTDALKVSFAKK 236
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: A0A059A9L6_EUCGR (Uncharacterized protein n=2 Tax=Myrtales TaxID=41944 RepID=A0A059A9L6_EUCGR)

HSP 1 Score: 92.8 bits (229), Expect = 2.720e-18
Identity = 59/164 (35.98%), Postives = 81/164 (49.39%), Query Frame = 1 
Query:    1 QTESDVITKKAGTYVPRDKRKLPSADSSNGNGLHQAAPAPAATTPGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPG--GQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFARK 486
            +T+SD++ K  GT+VPR+KRK            H A  A     P   GA                          VP+   P    P+NIL+   LP E T +ML  LF QYPGF E RM     G AF+E++D+MQ+ +A+ AL GFKL+  NP+ + +A+K
Sbjct:   92 KTKSDIVAKADGTFVPREKRKRHEEKGKKRKDQHDANQAGVGVNPAYPGAYGAMPPLSQVPYPGGAK---------VPEAPAP----PNNILFVQNLPHETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYSDEMQSTVAMQALQGFKLTPQNPMSITYAKK 242
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: A0A7S3NJ60_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ60_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.180e-18
Identity = 63/164 (38.41%), Postives = 82/164 (50.00%), Query Frame = 1 
Query:    1 QTESDVITKKAGTYVPRDKRKLPSADSSNGNGLHQAAPAPAATTPGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPG--GQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFARK 486
            +++SD+I K  GT+V R+KRK  S  ++N +  HQA       TP                                P    P    P N+L+A  LP E  Q ML  LF+QY G+ E RM PG  G AFIEFAD +QA +AL  LNGF LS T+ L L+FA++
Sbjct:   91 KSKSDIIAKADGTFVSREKRKRESPPAANTDAAHQAPQKKQLPTP--------------------------------PTNLTP----PSNVLFAQNLPDECNQNMLVILFQQYTGYKEVRMVPGKKGIAFIEFADDVQASLALAGLNGFSLSPTHALNLSFAKR 218
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: A0A6V1NUL1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUL1_HETAK)

HSP 1 Score: 91.3 bits (225), Expect = 8.430e-18
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1 
Query:  226 AVPQPAGPI-GDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPG--GQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFARK 486
            AV Q   P+  +VPH IL+A  LP +  ++ML  LF+QY G+ E RM PG  G AFIEF D+MQAG AL  LNGFKL+  + LQL++ARK
Sbjct:  145 AVQQVEQPVPANVPHRILFAQNLPDDCNEMMLDMLFQQYNGYKEVRMVPGKKGLAFIEFGDEMQAGYALQGLNGFKLTPQDLLQLSYARK 234
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: A0A3Q1F7D3_9TELE (U1 small nuclear ribonucleoprotein A n=5 Tax=Ovalentaria TaxID=1489908 RepID=A0A3Q1F7D3_9TELE)

HSP 1 Score: 90.5 bits (223), Expect = 1.060e-17
Identity = 57/163 (34.97%), Postives = 83/163 (50.92%), Query Frame = 1 
Query:    7 ESDVITKKAGTYVPRDKRK-LPSADSSNGNGLHQAAPAPAATTPGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPGGQ--AFIEFADQMQAGIALNALNGFKLSATNPLQLAFARK 486
            +SD+I K  GTYV RD++K       + G G  +  P  AA                                   P  AG   + P++IL+ T LP E  ++MLS LF Q+PGF E R+ PG    AF+EF +++QAG A +AL GFK++ TN ++++FA+K
Sbjct:   87 DSDIIAKMKGTYVERDRKKEKKKPKGTEGGGTKKGVPGGAA-----------------------------------PMVAGVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENEVQAGAARDALQGFKITQTNAMKISFAKK 214
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BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Match: A0A176VE80_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VE80_MARPO)

HSP 1 Score: 90.9 bits (224), Expect = 1.280e-17
Identity = 85/164 (51.83%), Postives = 110/164 (67.07%), Query Frame = 1 
Query:    1 QTESDVITKKAGTYVPRDKRKLPSADSSNGNGLHQAAPAPAATTPGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARM--APGGQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFARK 486
            +++SD ++K  GT+V R+KRK     +      HQA  APAA  P +A  XXXXXXXXXXXXXXXXXXXXXXXXX  P          +NIL+A  LP E   +M+  LF+Q+PGF E RM  A  G AFIEF D+MQA +AL AL+ FK++ TNP+Q+++A+K
Sbjct:   87 KSKSDAVSKADGTFVSREKRKKNDEKAERKRREHQAE-APAAGPPASAYXXXXXXXXXXXXXXXXXXXXXXXXXXXPP----------NNILFAQNLPREANNLMIEMLFQQFPGFKEVRMIEAKPGIAFIEFGDEMQASVALQALHNFKITPTNPMQISYAKK 239
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13867.3023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNU9_ECTSI8.930e-7693.98RNA binding / nucleic acid binding n=2 Tax=Ectocar... [more]
A0A812XDE7_SYMMI4.700e-2241.46Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A812Y221_SYMMI3.460e-2140.49Snrpb2 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A836CKH4_9STRA1.450e-2051.85U2 small nuclear ribonucleoprotein B n=1 Tax=Tribo... [more]
A0A662Y965_9STRA1.750e-1837.93Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A059A9L6_EUCGR2.720e-1835.98Uncharacterized protein n=2 Tax=Myrtales TaxID=419... [more]
A0A7S3NJ60_9STRA3.180e-1838.41Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6V1NUL1_HETAK8.430e-1854.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3Q1F7D3_9TELE1.060e-1734.97U1 small nuclear ribonucleoprotein A n=5 Tax=Ovale... [more]
A0A176VE80_MARPO1.280e-1751.83Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13867contigEcto-sp13_S_contig13867:118..3323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score245.7
Seed ortholog evalue1.5e-62
Seed eggNOG ortholog2880.D7FNU9
Preferred nameSNRPB2
Model size1045
KEGG koko:K11091,ko:K11094
KEGG Pathwayko03040,map03040
KEGG ModuleM00351,M00352
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000245,GO:0000354,GO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0001650,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005685,GO:0005686,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006325,GO:0006342,GO:0006355,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007530,GO:0007538,GO:0007539,GO:0007542,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008380,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015030,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0016607,GO:0017069,GO:0018992,GO:0018993,GO:0019099,GO:0019219,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030237,GO:0030532,GO:0030619,GO:0030620,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0034401,GO:0034622,GO:0034641,GO:0035613,GO:0035614,GO:0036002,GO:0040029,GO:0042802,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0044703,GO:0044877,GO:0045292,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048024,GO:0048468,GO:0048477,GO:0048519,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070828,GO:0070868,GO:0070990,GO:0071004,GO:0071005,GO:0071007,GO:0071010,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097157,GO:0097158,GO:0097159,GO:0097525,GO:0097549,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1902679,GO:1903311,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
Exons5
EggNOG free text desc.snRNA stem-loop binding
EggNOG OGsKOG4206@1,KOG4206@2759
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-12_003280.1
Cds size492
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13867.3023.1prot_Ecto-sp13_S_contig13867.3023.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13867 118..2559 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462739.6932168-CDS-Ecto-sp13_S_contig13867:117..3761681462739.6932168-CDS-Ecto-sp13_S_contig13867:117..376Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13867 118..376 +
1681462739.7107167-CDS-Ecto-sp13_S_contig13867:935..10301681462739.7107167-CDS-Ecto-sp13_S_contig13867:935..1030Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13867 936..1030 +
1681462739.71853-CDS-Ecto-sp13_S_contig13867:1703..17571681462739.71853-CDS-Ecto-sp13_S_contig13867:1703..1757Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13867 1704..1757 +
1681462739.726446-CDS-Ecto-sp13_S_contig13867:2475..25591681462739.726446-CDS-Ecto-sp13_S_contig13867:2475..2559Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13867 2476..2559 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462739.7345192-UTR-Ecto-sp13_S_contig13867:2559..30321681462739.7345192-UTR-Ecto-sp13_S_contig13867:2559..3032Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13867 2560..3032 +
1681462739.742854-UTR-Ecto-sp13_S_contig13867:3243..33231681462739.742854-UTR-Ecto-sp13_S_contig13867:3243..3323Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13867 3244..3323 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13867.3023.1

>prot_Ecto-sp13_S_contig13867.3023.1 ID=prot_Ecto-sp13_S_contig13867.3023.1|Name=mRNA_Ecto-sp13_S_contig13867.3023.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=164bp
QTESDVITKKAGTYVPRDKRKLPSADSSNGNGLHQAAPAPAATTPGAAGA
AAVPPASALPPVPPPAAIVAGAPPPAVPQPAGPIGDVPHNILYATGLPPE
ITQVMLSKLFEQYPGFSEARMAPGGQAFIEFADQMQAGIALNALNGFKLS
ATNPLQLAFARKA*
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mRNA from alignment at Ecto-sp13_S_contig13867:118..3323+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13867.3023.1 ID=mRNA_Ecto-sp13_S_contig13867.3023.1|Name=mRNA_Ecto-sp13_S_contig13867.3023.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3206bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13867:118..3323+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACGGAGAGCGACGTGATCACAAAGAAGGCGGGGACCTACGTCCCCCG
CGACAAGCGGAAGCTGCCCTCTGCGGACTCTTCGAACGGCAACGGTCTCC
ACCAGGCGGCGCCGGCGCCAGCTGCGACGACTCCCGGCGCCGCAGGCGCT
GCCGCCGTGCCTCCCGCCTCCGCCCTCCCGCCGGTCCCTCCGCCTGCTGC
CATCGTCGCCGGTGCCCCGCCTCCGGCGGTGCCGCAGCCCGCGGGTCCCA
TCGGAGACGGTGGGTTTTGTGTGTAGAGCATGATCCCCTTTTTTTTTTTT
TCGTTTTTTGTTTTTACCCTTGACATGAGGGATTTTTTAGCTTTTTGGGC
CCTAGCTTTTGCTCGTGGCAATGGCTCGTGTTTTTTTCCTCTCTTGAAGA
AGTGTGCCGCGTGTTTTTGCGTCGAAATGCTGCGCGTATCGCGCGCAATC
GCGCGCCGCGCCCGCGCTCTTTCCGCGAGTGGAGTGCGCCGATCTGATTA
TTAGGGCAAGGATCGATCACCCGAACAGGGGGATTGGCCGTTTCGAGTCT
GGTGGGTGTCGGCCGCAAAACACGCGCTCTGCCCCCCCCCCCCCTCCCCG
TGAAAGGGGGGGGCGTTGCCCTTGGTTGGAAAGTGTGCTAGTGACTCTTC
TTGGAAGCAAGATGTTACGTGCGTAATAATGAAATCGCTCTCCGTCTCTT
TTCAACCGAGATGCGTGGCCAATCAGCAACATTCGAGCTACCTCCCAACA
TCGCCGCGCCGTGCGCCCATCCGCGCGCTCCCCCCCGCCTCGCCGGCTGT
CTTTTTGTTTTGCTACAGTGCCGCACAACATCCTGTACGCCACCGGCCTA
CCGCCGGAGATCACTCAAGTCATGTTGTCAAAGCTTTTCGAGCAGTACCC
GGGGTTCTCAGAGGCAAGTCCCCGGAGGGAGAGGGAGAAGGAGGGGTAAA
GCGCAAAAGTGGAGTGCCTTTTCTGCGGTTCTTACCTCCTCGAAGCTTAC
ATAAAAAGTGTGTCACTCCACATGACTTCGAAATAAGAAGTGGCCCAGCT
TTCAGGGAGACATGAAGCTGCTGCATATTTTTGTTCATGTCTTGGCGCGC
GAATGTGCTGCAGGAATTGTAGGTATTCCTCTTCGGGCTCGTTGTGTACC
CTCTCCTTGCTAGTAGTGTGCGTGTTCTTCAGATCTTCTGATGGCTCTAG
CATGTTTGTGACCACGAACCGAGTCTTTGCTAGATTTTAAGATTAGCAAC
TGAGACGAGTTCAATGTGAAGACAACAACGACAATGTGACGGTGAGTATT
CCGTGGTGAACGGCGCTACCTTGAGCCCCTTGAGCCCTTTAGCCCCTGGA
GCCCCTTTGGTGGAGAATGACTCCTCCGAACTACAGACCCTTGGCCATGA
CATGGCGCGGCACGTCTCGTGGTGACCGCGAGTACATGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCCGCGTTCCGCCGCGCAACTGACGTGACTGAT
TTGTACCCAATATCGGCGTGTGTGCGGTCCTCCTGCTTGCTTTTTTGCCT
ATCCTTTCGTGGAACAAATGGAATGGTTCTATTCAGGCACGGATGGCACC
GGGAGGCCAGGCTTTCATCGAATTTGCGGATCAGATGCAGGTGAGATGAT
GGTGACTCAAAGAGCGAGAAAGATGCAGAGACGTATGTCTGGCGGGGGGA
GAGTCGGGGCGGGGGCGCCCAAAGCATTTTTTGGGGGGTAACAACGGTGC
AGACTAACCGCAGTATCGCTACGCTGCCCCCGAAGGAAGGGTTGCACGCA
GCACCCTCTGGACAAGTTAGCATGCTGAGCGTGCGCTTTTGGTCGCGCGG
GTTGTGATAGTATCGCGACGACAAGTTTCCGACTGAGCGCTGGGCTTGTC
GCGTCTGAGCGATCGCTCCCTGTTTGGGTGCGGTGTTTTGTACTATTCGA
GGATGTCCAGTGCACCGTGTAGCCTGGCGGTGCTCCGCCGCGTTTCTGTT
AGATATATGTACAAGAAAAACACTGATGTTCGTGCCGTTGACTTTTCACA
TGTATGGGCTTTCGCTCTTTTAACGGAATGCCCTTTTTTTTTCTTTTTTC
GTGTGCTTTTTCGCACTCATTCCGAAAGCTCTGTCAAGCAGCATGACGTG
GACAAGGAAAATGTTTCGCTGTTCAGCATGCAATGCCGAACCTCTCCCCC
CTCTCCTCCCCGTGCCACCGTTGTCTCACGACCCGGTTGAGCTTTGGTTT
GGTATTCCGACTCTCTCTCTCCCATCGGCGTCCGTGCACTCGACCCACTC
CCGCTCATGTTTTCGTTTTTGTGTGTTTCTGTTTCGCTCTTTTTTCGATC
AATATCAGGCCGGCATCGCCCTGAACGCTTTGAACGGCTTCAAGCTCTCG
GCAACAAACCCCCTCCAACTAGCCTTCGCGCGCAAGGCGTGAAAGCGGCG
TGGTGGATGGGGGAGAGAATAGCAAGAAGAGGCGAAGACAGAGAGAAGCA
GAGATGCTCGGCGGTGATGGGCAAGGGGCGTCGGCCGCCCCCGTCCATCG
CTCCATCTGTTGCACTGGTCAAGCCATATTTTCCGTTTGCGTTCCGTGAA
GACTCGCGCGCGTGTGGTGTCGACCACCTGTGTCTGTCTGCCCTTTTTCT
CGGGGAAGCCGTATGATGGGACGGGGAACGGAAGAGCATCAACGGGAAGG
GAGTTAGCCAAAGATGAAAACCACCAACAGAAAGAAGCAGCTTTTGTGGG
GGCATATAGCTGACCTCAGGAGAAGACGGCGTGCTTATGCTTGGTTGTTG
AGGGGGGCGGTCTCAAGCCTCGCGGTTGCGCCGGAACATCTCGTAGATTA
GTATTGGGAGGGTGGCCTGAGCCTATTAGTTGTGGCTTTGCAGCAGCAGC
AGCGCGTAGAGCAATGGTAGCAGGCTTTGGCTTCCTCTCGCACTCGTGGC
TCTGCTGGTTTGGGTGTGGGCTGGGACAGGCTGCTGGTTGCTGGTTGCTC
ACGTGGTCGAGAAGGGAGTGTTGGGGGGGGGCAGTGTAGACTTGTTGTTG
CCCTTGGCCTAGGATGGCCCTTACATATGCCATATACACAGAATGAAAAG
GGCAGAAACCATTCACGCACGCGGGGGGGGGCTGATACATGGAACGATGG
GCTGTTACTTATAATTGGGTGACGTTTGAGACGTGCACAAGACGATGTGA
TTCATT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13867:118..3323+

>mRNA_Ecto-sp13_S_contig13867.3023.1 ID=mRNA_Ecto-sp13_S_contig13867.3023.1|Name=mRNA_Ecto-sp13_S_contig13867.3023.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=492bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13867:118..3323+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACGGAGAGCGACGTGATCACAAAGAAGGCGGGGACCTACGTCCCCCG
CGACAAGCGGAAGCTGCCCTCTGCGGACTCTTCGAACGGCAACGGTCTCC
ACCAGGCGGCGCCGGCGCCAGCTGCGACGACTCCCGGCGCCGCAGGCGCT
GCCGCCGTGCCTCCCGCCTCCGCCCTCCCGCCGGTCCCTCCGCCTGCTGC
CATCGTCGCCGGTGCCCCGCCTCCGGCGGTGCCGCAGCCCGCGGGTCCCA
TCGGAGACGTGCCGCACAACATCCTGTACGCCACCGGCCTACCGCCGGAG
ATCACTCAAGTCATGTTGTCAAAGCTTTTCGAGCAGTACCCGGGGTTCTC
AGAGGCACGGATGGCACCGGGAGGCCAGGCTTTCATCGAATTTGCGGATC
AGATGCAGGCCGGCATCGCCCTGAACGCTTTGAACGGCTTCAAGCTCTCG
GCAACAAACCCCCTCCAACTAGCCTTCGCGCGCAAGGCGTGA
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