prot_Ecto-sp13_S_contig13861.3018.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13861.3018.1
Unique Nameprot_Ecto-sp13_S_contig13861.3018.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length220
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13861.3018.1 vs. uniprot
Match: A0A6H5JA09_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA09_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.170e-90
Identity = 193/224 (86.16%), Postives = 200/224 (89.29%), Query Frame = 0 
Query:    1 MKFSGESMLLELRQKYGNGLPPLLPDSKDGLVMEPQTNVVNIVNSYAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEAGGAGGRSQNAELGGVVMRHDEMVAADREQELPPGSQESIAEVDMMDEQSSDDEAPGVEGGGEDNS----DPFTAPSASTSAGAAPGWPSMFDTATEERDAGKENTTPAVSSAASATTDLGGRVQLPPDLDESRVGDVRQRH 220
            MKFSGESMLLELR K+GNGLPPLLPDSKDGLVMEPQTNVVNI+NS+AAAG XXXXXXXXXXXXXXXXXXXXXXXXXXXX         RSQNAELGGVVMRHDEMVAADREQELPPGSQESIAEVDMMD+QS+DDEAPGV GGGEDNS    DP TAPS S SAGAAPG PSMFDTAT+ERD G+ENTTPAVSSAASATTDLGG VQL PDLDESRVGD RQRH
Sbjct:  356 MKFSGESMLLELRHKFGNGLPPLLPDSKDGLVMEPQTNVVNIINSFAAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSQNAELGGVVMRHDEMVAADREQELPPGSQESIAEVDMMDDQSTDDEAPGVVGGGEDNSIVSADPSTAPSVSRSAGAAPGGPSMFDTATQERDVGEENTTPAVSSAASATTDLGGPVQLTPDLDESRVGDARQRH 579
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BLAST of mRNA_Ecto-sp13_S_contig13861.3018.1 vs. uniprot
Match: D7FIQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ3_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 1.190e-87
Identity = 194/224 (86.61%), Postives = 202/224 (90.18%), Query Frame = 0 
Query:    1 MKFSGESMLLELRQKYGNGLPPLLPDSKDGLVMEPQTNVVNIVNSYAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEAGGAGGRSQNAELGGVVMRHDEMVAADREQELPPGSQESIAEVDMMDEQSSDDEAPGVEGGGEDNS----DPFTAPSASTSAGAAPGWPSMFDTATEERDAGKENTTPAVSSAASATTDLGGRVQLPPDLDESRVGDVRQRH 220
            MKFSGESMLLELRQKYGNGLPPL+PDSKDGLVMEPQTNVVNIVNSYAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           QNAELGGVVMRHDEMVAADRE+ELPPGSQESIAEVDMMD+QS+DDEAPGV G GEDNS    DPFTAPS S SAGAAP  PS+FDTAT+ER+A +ENTTPAVSSAASATTDLGGRVQLPPDLDESRVGDVRQRH
Sbjct:  924 MKFSGESMLLELRQKYGNGLPPLVPDSKDGLVMEPQTNVVNIVNSYAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNAELGGVVMRHDEMVAADREEELPPGSQESIAEVDMMDDQSTDDEAPGVVGSGEDNSIVSADPFTAPSVSRSAGAAPRGPSIFDTATQERNAAEENTTPAVSSAASATTDLGGRVQLPPDLDESRVGDVRQRH 1147
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13861.3018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA09_9PHAE1.170e-9086.16Helicase C-terminal domain-containing protein n=1 ... [more]
D7FIQ3_ECTSI1.190e-8786.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13861contigEcto-sp13_S_contig13861:979..3360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13861.3018.1mRNA_Ecto-sp13_S_contig13861.3018.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13861 979..3781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13861.3018.1 ID=prot_Ecto-sp13_S_contig13861.3018.1|Name=mRNA_Ecto-sp13_S_contig13861.3018.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp
MKFSGESMLLELRQKYGNGLPPLLPDSKDGLVMEPQTNVVNIVNSYAAAG
STAAAEEDAQQREAASGEEEDEEEEFKDDALEAGGAGGRSQNAELGGVVM
RHDEMVAADREQELPPGSQESIAEVDMMDEQSSDDEAPGVEGGGEDNSDP
FTAPSASTSAGAAPGWPSMFDTATEERDAGKENTTPAVSSAASATTDLGG
RVQLPPDLDESRVGDVRQRH
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