mRNA_Ecto-sp13_S_contig13854.3013.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: A0A6H5KWJ5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWJ5_9PHAE) HSP 1 Score: 478 bits (1230), Expect = 1.350e-168 Identity = 230/242 (95.04%), Postives = 233/242 (96.28%), Query Frame = 1
Query: 1 RELTGRARDGTEDHEDPDLVVLPDGKTFYLQRRLVNSLFGAVFHGIQGVCPNTNDASSFTAPFREEEQFHVAVKRSSLAHMRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMVEPGEGTGEQHARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDAAVVMDFGMVQRMRRGPRGEVLAARDAQRFGKFRYMAPEIWNNQEYDGRQIDIW 726
REL RARDG+EDHEDPDL+VLPDGKTFYLQRRLVNSLFGAVFHGIQGVCPNTND SF APFREEEQFHVAVKRSSLAHMRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLL+MVEPGEGTGEQ ARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDAAVVMDFGMVQRMRRG RGEVL ARDAQRFGK RYMAPEIWNNQEYDGRQIDIW
Sbjct: 28 RELNRRARDGSEDHEDPDLIVLPDGKTFYLQRRLVNSLFGAVFHGIQGVCPNTNDPFSFAAPFREEEQFHVAVKRSSLAHMRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLRMVEPGEGTGEQQARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDAAVVMDFGMVQRMRRGSRGEVLPARDAQRFGKLRYMAPEIWNNQEYDGRQIDIW 269
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: D7FM76_ECTSI (CBL-interacting serine/threonine-protein kinase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM76_ECTSI) HSP 1 Score: 229 bits (583), Expect = 7.520e-72 Identity = 120/207 (57.97%), Postives = 144/207 (69.57%), Query Frame = 1
Query: 151 PNTNDASSFTAPFREEEQFHVAVKRSSLAHMRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMVEPGEGTGEQHARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDAAVVMDFGMVQRMRRGPRGE------------VLAARDAQRF---GKFRYMAPEIWNNQEYDGRQIDIW 726
PN +D+++F PFREE++ HVAVK SSL M QEN FKEI+VMR L QAG H VMP+++ACMS TH++VVTP+ GGDLL VE GTGE +AR+WFRQIL GLA++H +GLCHHD SPENVVIT G+AAVVMDFGMVQR++ GP G+ + A R F G RYMAPEIW N+EYDGR DIW
Sbjct: 3 PNPDDSATFVTPFREEDRTHVAVKMSSLEKMATVSQENAFKEISVMRHLM----QAGEHPHVMPVISACMSTTHLFVVTPFYMGGDLLSRVEL-HGTGEGNARRWFRQILLGLAYIHQQGLCHHDVSPENVVITNNGEAAVVMDFGMVQRLQTGPNGQSRMCPQECSIDSISADRARMCFIGDGICRYMAPEIWENREYDGRSADIW 204
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: A0A6H5KM61_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM61_9PHAE) HSP 1 Score: 191 bits (485), Expect = 7.100e-58 Identity = 95/155 (61.29%), Postives = 116/155 (74.84%), Query Frame = 1
Query: 43 EDPDLVVLPDGKTFYLQRRLVNSLFGAVFHGIQGVCPNTNDASSFTAPFREEEQFHVAVKRSSLAHMRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMVEPGEGTGEQHARKWFRQILYGLAHVHSR 507
EDP LV LP G+TF+LQRRLV+S+FGAVFHGI+G P+ D+++F PFREEEQ HVAVK SSL M QEN FKEIAVM+ L G GGH+ VM +++ACMS TH++VVTP+C GDLL VE +G GE AR+WFRQIL GLAH+H +
Sbjct: 33 EDPTLVRLPSGRTFWLQRRLVDSIFGAVFHGIEGWWPDPYDSATFVTPFREEEQTHVAVKMSSLERMATVSQENAFKEIAVMKHLMQG----GGHRHVMSVISACMSSTHLFVVTPFCNEGDLLSWVEV-DGIGEDKARRWFRQILLGLAHIHQQ 182
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: A0A6U0UU60_9STRA (Hypothetical protein n=3 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UU60_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.830e-28 Identity = 78/232 (33.62%), Postives = 121/232 (52.16%), Query Frame = 1
Query: 55 LVVLPDG--KTFYLQRRLVNSLFGAVFHGIQGVCPNTNDASSFTAPFREEEQFHVAVKRSSLA---HMRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMVEPGEGTGEQHARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDA---AVVMDFGMVQRMRRGPRGEVLAARDAQRFGKFRYMAPEIWNNQEYDGRQIDIW 726
L+ P+G + ++L R L ++++G V G + + D R +E+ VAVK SL MR EN F EIA M L + QAGGH V+ A C +++H++++ PYC GG+L ++E + AR FRQ+ G+ + + H D S ENV++ R + A+++DFGM R+ R G R GK YM+PEI + + +DG +ID+W
Sbjct: 59 LLDTPNGDFQAYHLVRTLRDAIYGRVVSGCRVIPTEDPDR------VRLDERAMVAVKMMSLQKIEEMRGRHAENPFNEIACMSFLHS---QAGGHPHVLMYEALCRTQSHLFMIMPYCSGGELHSVIEENGALEPERARALFRQMTQGVEFLGRASVAHRDLSLENVLLHRRIEEERIAMLIDFGMALRIPRDKDGRCHWISRQLRAGKLHYMSPEIISQRPFDGSKIDVW 281
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: A0A835YUI9_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUI9_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.430e-22 Identity = 64/159 (40.25%), Postives = 87/159 (54.72%), Query Frame = 1
Query: 259 ENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMVEPGEGTGEQHARKWFRQILYGLAHVHSRGLC--HHDFSPENVVITRMGDAAVVMDFGMVQRMRRGPRGEVLAARDAQ-RFGKFRYMAPEIWNNQEYDGRQIDIW 726
EN + EIA M+ +AA GGH ++P+ AA E +Y+V P+C GGDL V G G E+ AR FRQ+ GLA + + H D S ENV++ G A +VMDFGM R+ R V A Q R GK YM+PE++ +D + D+W
Sbjct: 112 ENPYDEIAAMQLIAA----RGGHPSILPITAALRDENTIYLVLPFCNGGDLFDYVNEGGGLTEEQARPLFRQLADGLAFLQREDIAILHRDMSLENVLM-HDGAALLVMDFGMSIRLPRAEEPGVRALIPPQTRRGKRSYMSPEVFAEMPFDAK-ADVW 264
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: A0A6V2QHT5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2QHT5_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.580e-21 Identity = 70/196 (35.71%), Postives = 96/196 (48.98%), Query Frame = 1
Query: 208 HVAVKRSSLAH---MRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMV----EPGEGTG---EQHARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDAAVVMDFGMVQRMRRGPRGEVLAARDAQR------------FGKFRYMAPEIWNNQ-EYDGRQIDIW 726
HVA+K A+ MR E+ KEIA M+ + AGS G V+ + +Y + PYC GGDL +V E +G G E AR WFRQ+L G+ H+ SRG+CH D S EN+++ D ++D GM R+ A D + GK YM+PEI+ NQ +DG ID+W
Sbjct: 137 HVAIKMVEWANVHRMRGRLLEDPVKEIAAMQLIGAGSPHVLGSTEVL------QDDDFLYSIMPYCAGGDLFGVVVNYAEENDGEGGMPEPVARYWFRQVLQGIHHLQSRGVCHRDLSLENILVNE--DNCAIIDMGMCLRVPYSDPFNAEATTDVRAGTMRRLMTPQGVCGKHNYMSPEIFQNQANFDGFAIDMW 324
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: A0A397DIW4_9STRA (Protein kinase domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DIW4_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.750e-21 Identity = 71/221 (32.13%), Postives = 106/221 (47.96%), Query Frame = 1
Query: 73 GKTFYLQRRLVNSLFGAVFHGIQ-GVCPNTNDASSFTAPFREEEQFHVAVKRSSLAHMRR-TPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMVEPGEGTGEQHARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDAAVVMDFGMVQRMRRGPRGEVLAARDAQRFGKFRYMAPEIWNNQ-EYDGRQIDIW 726
G + R L ++G V H +Q + PN N T VA+K S A +++ QEN E+A + L+ GH P + +Y V P+C GG+L +VE G E R+WF Q+L G+A++ SR +CH D S ENV++ G+ + ++DFG+ + G A + GK YM PEI+ NQ ++G DIW
Sbjct: 104 GHVYEFVRTLRKCIYGKVKHAVQLRLHPNGNGTFVRT-------NVEVAIKVMSKAIIQQGNLQENPLVELATQQYLSTP-----GH----PHIECLHDPEFIYAVLPFCRGGELFSLVETGGAMDEGECRRWFTQVLRGVAYLQSRYICHRDMSLENVLLD--GNTSKIIDFGLCVGIPVDANGMTYALPPSGAVGKIFYMPPEIYRNQVPFNGFAADIW 306
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: A0A7S2P5Y1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P5Y1_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 8.870e-21 Identity = 74/234 (31.62%), Postives = 120/234 (51.28%), Query Frame = 1
Query: 82 FYLQRRLVNSLFGAVFHGIQGVCPNTNDASSFTAPFREEEQFHVAVKRSSLA---HMRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMVEP---GEGTGEQHARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDAAVVMDFGMVQRMRRGPRGEVLAARD-----AQRF-------GKFRYMAPEIWNNQE-YDGRQIDIW 726
F+ +++L ++++G+V+ + V ++A F +E +VA+KR S A +R E+ KE+A ++ + H V+ + ++Y+V+PYC GDL + V EG E AR WFRQIL GL H+ SRG+CH D S EN+++ + ++++D GM R+ + D A+R GK YM+PEI+ N E +DG ID+W
Sbjct: 75 FWFRKQLKDAIYGSVWAALV-VRRLYHEAYGFVWMTTDE---YVAIKRLSWAVVHRLRGRHMEDPLKEVACLQLIG------NDHPNVLGCRVVLQDKNYLYIVSPYCNRGDLFENVTHRAGDEGLYEPEARYWFRQILQGLHHLQSRGICHRDLSLENILVN--DNDSLIIDMGMCLRVPYSSSAGDGSISDVYNGTARRLIVPQGSCGKLNYMSPEIFANFEAFDGFAIDLW 296
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: B7G286_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G286_PHATC) HSP 1 Score: 99.8 bits (247), Expect = 1.280e-20 Identity = 86/265 (32.45%), Postives = 122/265 (46.04%), Query Frame = 1
Query: 52 DLVVLPDGKTFYLQRRLVNSLFGAVF--------HGIQ--------GVCPNTNDASSFTAPFREE-EQFHVAVKRSSLA---HMRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMV------EPGE-GTGEQHARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDAAVVMDFGMVQRMRRGPRGEVLAARDAQR------------FGKFRYMAPEIW-NNQEYDGRQIDIW 726
D V + ++ QRRL ++++G+V+ HGI GV P S +AP E HVA+K A HMR E+ KE+A M+ L A H V+ +Y + PYC GDL +V GE G E AR WFRQIL+GL H+ ++G+CH D S EN+++ GD +++D GM R+ + A D R GK YM+PE++ N +DG ID+W
Sbjct: 87 DPSVQEEVLAYWPQRRLQDAIYGSVWACLVLRRHHGIAADDAARAAGVEPG-----SASAPIVWEISGQHVAIKMVEWARVHHMRGRLLEDPVKEVAAMQLLGAR------HPNVLGSTEVLQDGDFLYSIMPYCRDGDLFGVVVQYAEDSGGESGMPEPVARFWFRQILWGLHHLQTQGVCHRDLSLENILVD--GDRCMIIDMGMCLRVPYNDPHKPGAVTDVTRGSTRRLMRPQGVCGKHNYMSPEVFANTDSFDGFAIDLW 338
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Match: A0A4D9CSS4_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSS4_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.010e-20 Identity = 72/226 (31.86%), Postives = 110/226 (48.67%), Query Frame = 1
Query: 55 LVVLPDGKTFY-LQRRLVNSLFGAVFHGIQGVCPNTNDASSFTAPFREEEQFHVAVKRSSLAHMRRTPQENVFKEIAVMRDLAAGSRQAGGHQFVMPLVAACMSETHVYVVTPYCGGGDLLKMVEPGEGT-GEQHARKWFRQILYGLAHVHSRGLCHHDFSPENVVITRMGDAAVVMDFGMVQRMRRGPRGEVLAARDAQRFGKFRYMAPEIWNNQEYDGRQIDIW 726
LV L + Y L R L +++G V G+ T +A + + VAVK + QE+ KEI+ M+ L + G+ VM LV E HVY+V P+C GG++ + E E+ AR +F QIL GL ++H+RG+ H D S EN++ + V++D GM + +VL + GK YM+ EI+ NQ++ +DIW
Sbjct: 132 LVSLAGTQAVYALIRTLRPAIYGKVKLGM------TLEARDADGSYHMSTERPVAVKIVRKEKLGGRSQEDPLKEISAMQYLGSP-----GNPHVMGLVEVLEDEEHVYIVLPFCDGGEVCQWFERSRYMLREEVARGFFLQILSGLTYLHARGVVHRDMSLENLLYDQRTKRCVIIDLGMCLHLPVPATSDVLVRKQGY-CGKLTYMSHEIYQNQDFYAAAVDIW 345 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13854.3013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13854.3013.1 >prot_Ecto-sp13_S_contig13854.3013.1 ID=prot_Ecto-sp13_S_contig13854.3013.1|Name=mRNA_Ecto-sp13_S_contig13854.3013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp RELTGRARDGTEDHEDPDLVVLPDGKTFYLQRRLVNSLFGAVFHGIQGVCback to top mRNA from alignment at Ecto-sp13_S_contig13854:382..4590+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13854.3013.1 ID=mRNA_Ecto-sp13_S_contig13854.3013.1|Name=mRNA_Ecto-sp13_S_contig13854.3013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4209bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13854:382..4590+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13854:382..4590+ >mRNA_Ecto-sp13_S_contig13854.3013.1 ID=mRNA_Ecto-sp13_S_contig13854.3013.1|Name=mRNA_Ecto-sp13_S_contig13854.3013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13854:382..4590+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |