prot_Ecto-sp13_S_contig1385.3009.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1385.3009.1
Unique Nameprot_Ecto-sp13_S_contig1385.3009.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length180
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1385.3009.1 vs. uniprot
Match: A0A6H5KLU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU0_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.710e-16
Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = 0 
Query:    3 RSADVGLPPPGPGQTAALTLLRPSTAGSQAPVVSMATFLHNAEMGGMTLDEVEASLASPVITTPPSMVRPGTAVSR 78
            RSADV LPP GPGQ A   L + S A SQAPV  +A  L NAEMGGM LD++EASL S ++ +PPSM+RPGT VSR
Sbjct:  141 RSADVVLPPLGPGQAAVRALPKRSAARSQAPVPDIADLLDNAEMGGMALDDLEASLTSLIMNSPPSMLRPGTTVSR 216
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BLAST of mRNA_Ecto-sp13_S_contig1385.3009.1 vs. uniprot
Match: D7FU95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU95_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.300e-12
Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 0 
Query:   14 PGQTAALTLLRPSTAGSQAPVVSMATFLHNAEMGGMTLDEVEASLASPVITTPPSMVRPGTAVSR 78
            P   AAL LL+ S AGSQ+P + MA  L+NAE GGMTL+EVEA LASP++ TPP+++RPG   +R
Sbjct:  953 PAPAAALALLQQSVAGSQSPSLDMARLLYNAEEGGMTLEEVEACLASPIVATPPALLRPGVGAAR 1017
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BLAST of mRNA_Ecto-sp13_S_contig1385.3009.1 vs. uniprot
Match: A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 9.630e-11
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0 
Query:   20 LTLLRPSTAGSQAPVVSMATFLHNAEMGGMTLDEVEASLASPVITTPPSMVRPGTAVSRA 79
            L +++ S AGS +P + MA FLH AE GGMTLDEV+A LASP++ TPP+++RPG    RA
Sbjct: 1212 LAMVQQSVAGSPSPSLDMARFLHTAEEGGMTLDEVDACLASPIVATPPALLRPGVGAPRA 1271
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1385.3009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KLU0_9PHAE1.710e-1663.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU95_ECTSI1.300e-1258.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL50_9PHAE9.630e-1156.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1385contigEcto-sp13_S_contig1385:7259..8645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1385.3009.1mRNA_Ecto-sp13_S_contig1385.3009.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1385 7257..8645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1385.3009.1 ID=prot_Ecto-sp13_S_contig1385.3009.1|Name=mRNA_Ecto-sp13_S_contig1385.3009.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp
TDRSADVGLPPPGPGQTAALTLLRPSTAGSQAPVVSMATFLHNAEMGGMT
LDEVEASLASPVITTPPSMVRPGTAVSRAEAVDTEKEDEAAVSPPTTATG
FMGRVVAGMSMSRLFGPRSPASPSSAAAAATEAADSAEPTAEVETAAAES
LKQEHAAEEAIATAAAAKKAQPDLGNSLEV
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