mRNA_Ecto-sp13_S_contig13751.2947.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13751.2947.1
Unique NamemRNA_Ecto-sp13_S_contig13751.2947.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: D7G3J5_ECTSI (GDP-mannose 6-dehydrogenase n=6 Tax=Phaeophyceae TaxID=2870 RepID=D7G3J5_ECTSI)

HSP 1 Score: 618 bits (1593), Expect = 5.450e-219
Identity = 302/307 (98.37%), Postives = 305/307 (99.35%), Query Frame = 1
Query:    1 CGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDNCPDDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDESPNWVSPDALMTS 921
            CGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMN AGIPCCHPDNCP+DLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDV+ARM NAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDP+IDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDESPNWVSPDALMTS
Sbjct:   25 CGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNAAGIPCCHPDNCPNDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVRARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDESPNWVSPDALMTS 331          
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: D7FM80_ECTSI (GDP-mannose 6-dehydrogenase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D7FM80_ECTSI)

HSP 1 Score: 517 bits (1332), Expect = 1.330e-179
Identity = 252/304 (82.89%), Postives = 273/304 (89.80%), Query Frame = 1
Query:    1 CGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDNCPDDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDESPNWVSPDAL 912
            CGVVGGAYAKAY HHGF + GFDVVPAII+KMN AG+ C HPD+CP DLN +IVLLSVPTPLIKETQRLDMKYVWST+PLVVKLIEQS+G+ PI VIRSTVPPG T KW A V+ KTDKPF VAFQPEFLRAVSCEEDARAPWQ+VFG     +D +ARM+N FL+FVGRDE+KLTVL IAEAEFMKLVHNYANGLKISFANCIYGLAHELDP+IDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWI++  +  ++VEL ESPNWVSP  L
Sbjct:   12 CGVVGGAYAKAYVHHGFSLTGFDVVPAIIDKMNDAGVKCFHPDDCPSDLNADIVLLSVPTPLIKETQRLDMKYVWSTIPLVVKLIEQSSGLTPILVIRSTVPPGTTLKWEAEVRAKTDKPFQVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADDTRARMSNCFLDFVGRDENKLTVLTIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWITNTPS--LKVELTESPNWVSPSEL 313          
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: A0A6H5KTU6_9PHAE (UDPG_MGDP_dh domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU6_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 2.890e-129
Identity = 199/288 (69.10%), Postives = 217/288 (75.35%), Query Frame = 1
Query:   49 FEVRGFDVVPAIIEKMNTAGIPCCHPDNCPDDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDESPNWVSPDAL 912
            + + GFDVVPAII+KMN AG+ C HPD+CP DLN +IVLLSVPTPLIKETQRLDMK                                                  VAFQPEFLRAVSCEEDARAPWQ+VFG     +D +ARM+N FL+FVGRDE+KLTVL IAEAEFMKLVHNYANGLKISFANCIYGLAHELDP+IDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWI++  +  ++VELDESPNWVSP  L
Sbjct:    4 YSLTGFDVVPAIIDKMNDAGVKCFHPDDCPSDLNADIVLLSVPTPLIKETQRLDMK--------------------------------------------------VAFQPEFLRAVSCEEDARAPWQIVFGCAKDADDTRARMSNCFLDFVGRDENKLTVLTIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWITNTPS--LKVELDESPNWVSPSEL 239          
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: A0A814QHR5_9BILA (UDP-glucose 6-dehydrogenase n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A814QHR5_9BILA)

HSP 1 Score: 146 bits (369), Expect = 4.440e-36
Identity = 99/296 (33.45%), Postives = 155/296 (52.36%), Query Frame = 1
Query:    1 CGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDNCP-----DDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVI-RSTVPPGMTKKWMAAVKE-KTDKP--FHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFV----GRDESKLTVLNIAE-AEFMKLVHNYANGLKISFANCIYGLAH----ELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINE 834
            CG+VG A   +    G  + G D       +M      C  PD        +D+  +++L+++PTP    T  L  + +  ++ L+  LI++     P+ +I +STV  G ++K    +K   TD    +H+ + PEFLRA   + DA  P + +FG   G+  +        LE +    G   S +T+++ +E AEF+KLVHN++N ++ISF+NC   LA     +LD  IDA +VL +VS TAE F + KYG++ G PY G CLPKD+    ++  E   +R+FL     INE
Sbjct:    9 CGIVGYATCLSLSSLGHSMVGIDTCMIARNRMINMNFSCFSPDEVMFEEKMNDILVDVILIALPTPFCSLTNTLSDESIMLSIGLISYLIKKKKDDNPVMIILQSTVSVGTSRKLFNGLKLFNTDDNCNYHLFYHPEFLRAEKSQYDALHPIKQIFGLTDGKPKMDLSYYENILEEIFSPIGSFRSSITMMSSSEEAEFLKLVHNFSNAMRISFSNCCAHLASLLSSKLDKEIDASRVLSVVSETAESFYNNKYGIKPGYPYSGACLPKDIQCFMNIT-EQYPYRQFLESVHLINE 303          
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: A0A3G4ZX75_9VIRU (GDP-mannose 6-dehydrogenase n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZX75_9VIRU)

HSP 1 Score: 138 bits (348), Expect = 5.620e-33
Identity = 88/281 (31.32%), Postives = 149/281 (53.02%), Query Frame = 1
Query:    4 GVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDNCPDDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFAN----CIYGLAHELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINE 834
            GVVGG++  +YK  G +V G +    ++EK           D+     + + + LS+ TPL + TQ+L++KY++S++P V  +++ S     + V+RSTVPP  T  +   ++       +V FQPE+LRA S ++D+ AP  ++ G   G  DV + +   + +F+ R+  K+  + I EAE  KL HN  N  KIS+ N     +  +  E    I+A +V+  +++T E   +R+YGL+ G  +GG CLPKD+ +   L     +  +       +NE
Sbjct:   29 GVVGGSFGLSYKKVGCDVVGIEASKELVEKFKKEFETYHISDDLSHVKDVDFIFLSINTPLDEATQKLNLKYLFSSIPNVCTIVKNSPKA--LVVVRSTVPPTTTNTYKKELEALCGFKVNVLFQPEYLRAYSAKKDSEAPLYIIIGRDEGT-DVSS-LIELYSKFIARE--KIEEMTIEEAELQKLFHNCFNATKISYFNQCKLLMDAVNKEHKSNINADRVIMSLANTCEGLWNRRYGLKSGHAFGGFCLPKDMKQAAYLEKIYGLKAQIFKSVNDVNE 303          
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: A0A0G0IL69_9BACT (UDP-glucose 6-dehydrogenase n=1 Tax=Parcubacteria group bacterium GW2011_GWD2_38_11 TaxID=1618941 RepID=A0A0G0IL69_9BACT)

HSP 1 Score: 124 bits (312), Expect = 6.770e-28
Identity = 97/301 (32.23%), Postives = 149/301 (49.50%), Query Frame = 1
Query:    4 GVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDNCP----DDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFR-EFLSGTGKINEWISSAKAKNMRVEL 876
            G+VG A  K     G  V  +D  P II+ +   G    H +N      D++  EI ++SVPTP   +  R+++ ++   +  + K I++ T   PIFV+RSTVPPG T+    +V EK       K F +   PEFLR VS E+D   PW VV G     +D  A +A A +  + +    +  +++ EAE MK  HN  N  KISF N +  +  ++   +D++     V  +AE   + +YG +   PYGGVCLPKD     + A E + F    L GT   N+ +  +     ++ +
Sbjct:   15 GIVGQATGKGLARAGHNVLFYDKNPNIIKTLKNDGYHADHIENLSTVETDEI--EIFMISVPTPT--KEGRVELSFLNEALTSLGKAIKE-TEKNPIFVVRSTVPPGTTENLAVSVLEKESGKKAGKDFGICMNPEFLREVSAEKDFMNPWMVVIGC----DDKSAGLALAKIYKIFK--CPIVHMSLKEAEMMKYAHNLLNATKISFFNEMRLVGDKMG--VDSEVFFPAVVKSAEAMWNPEYGTKNFGPYGGVCLPKDTEAFFTWALEVADFEMPVLKGTIATNKLMQESVTVEQQINV 302          
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: UPI0016710D30 (Uncharacterized protein n=2 Tax=Streptomyces fumigatiscleroticus TaxID=66371 RepID=UPI0016710D30)

HSP 1 Score: 122 bits (306), Expect = 2.060e-27
Identity = 94/297 (31.65%), Postives = 142/297 (47.81%), Query Frame = 1
Query:    4 GVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDNCPDDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKA--RMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVE 873
            GVVG A  K + H G EV   D++P  ++ + + G+      +  D+ +   V L++PTP   E  R D+         V K +  ++G  P+ V+RSTVPPG T+  +  + EK       + F +A  PEFLRA S  ED   PW  V         V+   R++     F G      T  + A AE +K  HN  N  KISF N ++ ++  L   +D   +   V+ +AE   + +YG+R GAPYGGVCLPKD      LA    +    L    ++N+ ++   A + R +
Sbjct:   10 GVVGTATGKGFLHAGHEVTFIDILPRRLDYLRSQGLDARDTLDLEDEPD-SFVFLTLPTP--NEGHRYDLSAFEDGTAAVGKALATASG-TPVVVVRSTVPPGTTEGLVQPLLEKHSGKTLGEDFTLASNPEFLRAASAVEDFMHPWMTVIA----SRSVRTVERLSALLAPFGGELR---TFSDPAAAEMVKCAHNIFNATKISFWNEMWLVSQALG--LDLDPIAETVARSAEGSYNPRYGIRGGAPYGGVCLPKDTKGFLGLADSIGLDMPLLRAVVRVNDVLADRTAVDDRAD 293          
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: UPI00166F86CE (UDP-glucose/GDP-mannose dehydrogenase family protein n=1 Tax=Streptomyces ruber TaxID=83378 RepID=UPI00166F86CE)

HSP 1 Score: 121 bits (304), Expect = 4.110e-27
Identity = 99/310 (31.94%), Postives = 141/310 (45.48%), Query Frame = 1
Query:    4 GVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHP---DNCPDDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDESPNWVSPDA 909
            GVVG A  K + H G EV   D+    +E + + G+        DN PD      V L++PTP +    R D+         V K +  ++G   + V+RSTVPPG T+  +  + EK       + FH+A  PEFLRA S  ED + PW  V            R++     F G      T  + A AE +K  HN  N  KISF N ++ ++  L   +D   +   V+ +AE   +  YG+R GAPYGGVCLPKD      LA   S+    L    ++N+ ++   A      +      VSP A
Sbjct:   10 GVVGTATGKGFLHAGHEVTFIDIAHRRLEYLRSQGLDARDTLDLDNEPDSF----VFLTLPTPNVGH--RYDLSAFEDGTTTVGKALGTASG-THVVVVRSTVPPGTTEGLVQPLLEKHSGRTLGEDFHLASNPEFLRAASAVEDFKHPWMTVIASRSTR--TVERLSELLAPFGGELR---TFDDPAAAEMVKCAHNIFNATKISFWNEMWLVSQALG--LDLDPIAQTVARSAEGSYNPSYGIRGGAPYGGVCLPKDTQGFLGLADSISLEMPLLRAVVRVNDVLADRAAGGRSERVAGEKAAVSPAA 305          
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: A0A1M5XVU1_9ACTN (UDPglucose 6-dehydrogenase n=3 Tax=Streptomyces TaxID=1883 RepID=A0A1M5XVU1_9ACTN)

HSP 1 Score: 118 bits (296), Expect = 4.080e-26
Identity = 93/289 (32.18%), Postives = 135/289 (46.71%), Query Frame = 1
Query:    4 GVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDNCPD-DLNPE---IVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEK-----TDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWIS 843
            GVVG A  K + + G +V   DV    ++ + + G+     D   D DL+ E    + L++PTP +    + D+    +    V K +  +TG  P+ V+RSTVPPG  +  +  + EK       + F +A  PEFLRA +  ED R PW  V          + R+      F G         N AEAEF+K  HN  N  KISF N ++ +   L   +D   +   V+ +AE   +  YG+R GAPYGGVCLPKD      LA    V    L     +N+ ++
Sbjct:   10 GVVGTATGKGFVNAGHQVTFIDVAQQRLDHLRSEGL-----DARADLDLSAEPDAFIFLTLPTPNVGH--QYDLSAFEAGTASVGKALADATG-TPVVVVRSTVPPGTAEGLVQPLLEKHSGKNVGEGFSLASNPEFLRAATAVEDFRHPWMTVIASRSVR--TRERLGELLAPFGGETR---VFSNPAEAEFVKCAHNIYNATKISFWNEMWLVGQHLG--LDLDPIAQTVARSAEASYNPHYGIRGGAPYGGVCLPKDTQGFLGLAASIGVDMPLLQAVVAVNDKLA 283          
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Match: UPI001E3D096E (hypothetical protein n=1 Tax=Pseudonocardia sp. TRM90224 TaxID=2812678 RepID=UPI001E3D096E)

HSP 1 Score: 118 bits (295), Expect = 5.820e-26
Identity = 97/300 (32.33%), Postives = 140/300 (46.67%), Query Frame = 1
Query:    4 GVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNTAGIPCCHPDNCPDDLNPE-IVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKE-----KTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDES 885
            GVVG A  + +   G +V   DV    ++ + + G       +  D+  PE  +LL++PTP +     L+     +    V K +  +T    + V+RSTVPPG T+  +    E     K    F +A  PEFLRAVS  ED R PW  V      +ED  A +    L F G      T  + AEAEF+K  HN  N  KISF N ++ +A E+   +D   +   V+ +AE  ++  YG+R GAPYGGVCLPKD       A    V    L      NE + +  ++ +     E+
Sbjct:    4 GVVGTATGEGFLGAGHQVTFIDVAQHRLDDLRSRGYDARDEIDLSDE--PEAFILLTLPTPHVGREYNLNAFAAGAA--SVGKALATATARHTV-VVRSTVPPGTTEGLVRTSLEEHSGKKAGVDFGLASNPEFLRAVSAAEDFRNPWMTVIASR--DEDTLAALRELLLPFGGELR---TFSDPAEAEFIKCAHNVFNAAKISFWNEMWLVAQEIG--LDLDPIASTVAKSAEGSINPNYGIRGGAPYGGVCLPKDTNGFLGFAAGIGVDMPLLEAVVDTNERLEAVVSREVDAATAEA 291          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13751.2947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3J5_ECTSI5.450e-21998.37GDP-mannose 6-dehydrogenase n=6 Tax=Phaeophyceae T... [more]
D7FM80_ECTSI1.330e-17982.89GDP-mannose 6-dehydrogenase n=3 Tax=Phaeophyceae T... [more]
A0A6H5KTU6_9PHAE2.890e-12969.10UDPG_MGDP_dh domain-containing protein n=1 Tax=Ect... [more]
A0A814QHR5_9BILA4.440e-3633.45UDP-glucose 6-dehydrogenase n=4 Tax=Adineta steine... [more]
A0A3G4ZX75_9VIRU5.620e-3331.32GDP-mannose 6-dehydrogenase n=1 Tax=Edafosvirus sp... [more]
A0A0G0IL69_9BACT6.770e-2832.23UDP-glucose 6-dehydrogenase n=1 Tax=Parcubacteria ... [more]
UPI0016710D302.060e-2731.65Uncharacterized protein n=2 Tax=Streptomyces fumig... [more]
UPI00166F86CE4.110e-2731.94UDP-glucose/GDP-mannose dehydrogenase family prote... [more]
A0A1M5XVU1_9ACTN4.080e-2632.18UDPglucose 6-dehydrogenase n=3 Tax=Streptomyces Ta... [more]
UPI001E3D096E5.820e-2632.33hypothetical protein n=1 Tax=Pseudonocardia sp. TR... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13751contigEcto-sp13_S_contig13751:3..3217 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start1
Seed ortholog score99.4
Seed ortholog evalue2.9e-18
Seed eggNOG ortholog222534.KB893726_gene316
Model size1684
KEGG rclassRC00291
KEGG koko:K00012
KEGG ReactionR00286
KEGG Pathwayko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100
KEGG ModuleM00014,M00129,M00361,M00362
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.UDP-glucose/GDP-mannose dehydrogenase family, central domain
EggNOG OGs2IF5H@201174,COG1004@1,COG1004@2
EC1.1.1.22
Cds size831
COG Functional cat.M
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13751.2947.1prot_Ecto-sp13_S_contig13751.2947.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13751 96..2440 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462733.9542754-UTR-Ecto-sp13_S_contig13751:2..951681462733.9542754-UTR-Ecto-sp13_S_contig13751:2..95Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13751 3..95 +
1681462733.99681-UTR-Ecto-sp13_S_contig13751:2440..30451681462733.99681-UTR-Ecto-sp13_S_contig13751:2440..3045Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13751 2441..3045 +
1681462734.0049465-UTR-Ecto-sp13_S_contig13751:3062..32171681462734.0049465-UTR-Ecto-sp13_S_contig13751:3062..3217Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13751 3063..3217 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462733.9660094-CDS-Ecto-sp13_S_contig13751:95..3011681462733.9660094-CDS-Ecto-sp13_S_contig13751:95..301Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13751 96..301 +
1681462733.975741-CDS-Ecto-sp13_S_contig13751:1043..13161681462733.975741-CDS-Ecto-sp13_S_contig13751:1043..1316Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13751 1044..1316 +
1681462733.985506-CDS-Ecto-sp13_S_contig13751:2088..24401681462733.985506-CDS-Ecto-sp13_S_contig13751:2088..2440Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13751 2089..2440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13751.2947.1

>prot_Ecto-sp13_S_contig13751.2947.1 ID=prot_Ecto-sp13_S_contig13751.2947.1|Name=mRNA_Ecto-sp13_S_contig13751.2947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp
MNTAGIPCCHPDNCPDDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLV
VKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLR
AVSCEEDARAPWQVVFGYMPGEEDVKARMANAFLEFVGRDESKLTVLNIA
EAEFMKLVHNYANGLKISFANCIYGLAHELDPTIDAQKVLYLVSSTAECF
LSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWIS
SAKAKNMRVELDESPNWVSPDALMTS*
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mRNA from alignment at Ecto-sp13_S_contig13751:3..3217+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13751.2947.1 ID=mRNA_Ecto-sp13_S_contig13751.2947.1|Name=mRNA_Ecto-sp13_S_contig13751.2947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3215bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13751:3..3217+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGCGGCGTCGTGGGCGGCGCCTATGCGAAGGCGTACAAGCACCACGGCTT CGAGGTGCGCGGCTTCGATGTCGTACCGGCCATCATCGAGAAGATGAACA CCGCCGGCATCCCATGCTGCCACCCGGACAACTGCCCCGACGACCTTAAC CCTGAGATCGTCCTCCTGTCGGTGCCCACCCCGCTCATCAAGGAGACGCA GCGCCTCGACATGAAGTACGTGTGGTCGACCGTCCCCCTGGTGGTCAAGC TCATCGAGCAGTCCACCGGCATCGCGCCCATCTTCGTGATCCGATCCACG TGAGTGCAGATCCACTGTATGTAGTCAAGTGGAGCTTTCGGTTTAATTCT GTCACATCATCGCTCTTCTTACGCGCGCGTGTCACAAGGTACAGTAGCAG ACTTCTGCTGTAAGAAGGAGCTGCCTCCGGTATATCTCCCGTCTCGCACT GCCAACAATATCTCTCGCATTGCGGTTGTCTGCTGTAGCCCCCCTCATGC ATACATGTCCCGAGTAGAGATGCTTGTATATCGTGTGTTGTGTCGATTGT TCGTGTAGGCTGTATAGACGACAGACCCATCTGTATGTATTTGATACTCC CGTGTTGAGCGGTAGAGCGCCTGATTTGTCCGACTCATGTCGCTGGCAGC ATTAACTCGCGGCTCGGGACGGCGAGCGGCAAGGATCCTTGCTTGTCCGT GCCTGTGGCATGATCAAACGCGGCCGTCGTGTCCTGGTGTCCTTGCGCCG ATTGTCGAATTGTTCATCACTGATGTTCTTAAAGAACTTGTGTATTCGTA CCAGCACGTAATTATCCCGAAAACGGGTGGATGGAACAATTCCCGCGTTG ATGTTCTGTTGCAGCATCTGCCAGCATCTCAGGCCTCGAGCCCAACCAAC TCCAAAGGTTGCAGCATACCTTTTCATCGTCTGATACACCTTCGGGCTAG ACGAGTCTTGATACTAACACGTATGCGTGCACATGGATCACATTTACGCA TCGCATCGGCGTACGTATGCATACCGGCATCTTCGTTACAGGGTGCCCCC CGGCATGACCAAGAAGTGGATGGCGGCCGTCAAGGAGAAGACCGACAAGC CGTTCCACGTGGCCTTCCAGCCGGAGTTCCTCCGCGCCGTCTCTTGCGAA GAGGACGCCCGGGCGCCATGGCAGGTGGTTTTCGGCTACATGCCCGGAGA GGAGGACGTGAAGGCCCGCATGGCCAACGCGTTCCTCGAGTTCGTCGGCC GCGACGAGTCCAAGCTCACCGTGCTCAACATCGCGGAGGCCGAGTTCATG AAGCTCGTGCACAAGTGAGTCGGTTCGATTGTTTGTATCCTAACCCGACA GTAGTGTGGTTACGCCAACCATAAATGATGCCATCTTGTAGCCGTATGCA TACATAATAGTACTATTGATAATACGCTGTGCAAAAATTCCGCCATTTCT CCTTTTCTCCGAACACCCAAAATATAAATTGGGGGAGTTGTTTGCACGTG TACACATCATACAAGAAGTAATTTATTGTCAATAGGGTTGGGTGTGTTTG TTAGGGACGAAACAGTTGTAAGTTGGGTGTGGTTTGTTTTTTGTTTTTGA GACATTTTTAATGGTAGTGTTTTGGGGACGCAACATGAACGATATATTTC CAAGTTCTCTAGTGGCATTCGGTAACAAAACACACACCCCAATCAGTTAG AGGACCAACCAATAGGCGCGAAAAAAATGAGGACACATGGCCCCCATAGG TGATGGGTCCGACCGCGCGTTGCAGCCAACGAAAAATGACCTTGCCCCCG TTGCCACCACGTGTATGACCCGAGGTGTTGGCCCACTCTGTTTTTGTATT GTCATCATTGACTCTATCCCCTGTCTGGACATGTAGTCTAATGCTGGAAG GTTATGTAACTAACCCTTACCCTGTGTTTTGTGGCACGCGGTTCGCTGTT TAGTAAAAATAACTGCGGCGGTGATTTGTCCTCCATCCAACTCTCGATCC GATGCATAAACCAGCGCCGCAATGATGACGATACTGACCCTGCTCCCCTG TTCTCCTTTTATCCCCTCGTCCTTCACGTGCTACAGCTACGCGAACGGGC TTAAGATTTCCTTCGCCAACTGCATCTACGGCCTCGCACACGAGCTCGAC CCCACGATCGACGCCCAGAAGGTGCTATACCTGGTGTCCTCCACGGCGGA GTGCTTCCTCAGCCGCAAGTACGGCCTTCGCGTGGGCGCCCCGTACGGCG GCGTATGCCTGCCCAAGGACGTGCCGGAGCTCACCAGCCTCGCACCAGAG GGCTCCGTGTTCAGGGAGTTCCTGTCGGGCACCGGCAAGATCAACGAGTG GATCTCGAGCGCTAAGGCCAAGAACATGCGGGTGGAGCTCGACGAGAGCC CCAACTGGGTGTCCCCCGACGCCCTCATGACCTCCTAAGAAGTCACATCA GAATGATCACGGTTGTTTGAACATCTTGACCTTTCCTTCTGGGAAAGCAC GATTGTTTGAACACTGACGTTTCCTTTGGGAAAGCAAAGACGTTGTTGAG ACGTGTTTTTTGATTGGTGAAAGATATTACCTCTGCTCTCGTTTGCTTCT CTAGCAAGCATGAGGTTGGAGAGCACGGGCGAAAAAGTGTTGGCACTGCT GTACTTGTAGAGAAGACCTTCCGAGCGATCGATTTTGAACGGTAGATGCC GGTTGCTCATTTGTTGGCGGTCCATGTGATGTCATACTTGTGTCTTTTTT TTTTTTTAACGTGGTGGAGGTGTGTGTTTGATGTGCCATATACTACGATT AGGTTGGCTCTCTGTATGCGAAGAGGGCATGGCTTTCTGAATCATTGGGA GTTTCTCTGCAATGGCAGACAAGTGTGTGGTGAAGGTGCGGGCCGTCTTC TTGAAGCGGTCGTGCTTGTAATTTAGAACACTTACGTGAGTGTTTGCCGT GATGTCGGGCAATACCTTTGTGCGCTTGTCGCGTATGGATGGCTGTAGTG TAGGTAGGATGTGTTCTTGATTGTGTTGCGAGGGACACGCCGAGGGACAC GCCGACACGCCTGGCCTGCTGGTCACGTTTGATCATGGTAAATGTGTCCG CATTGATTTGGTGTCTTATATAATTTACGGAAAAATCAACGACCCAGACG TCCCACCCGGATATCCTGTTGTATCTCGTTTTTTGCGACGAAACATAGTG ACACATGACGGCATG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13751:3..3217+

>mRNA_Ecto-sp13_S_contig13751.2947.1 ID=mRNA_Ecto-sp13_S_contig13751.2947.1|Name=mRNA_Ecto-sp13_S_contig13751.2947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=831bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13751:3..3217+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACACCGCCGGCATCCCATGCTGCCACCCGGACAACTGCCCCGACGA
CCTTAACCCTGAGATCGTCCTCCTGTCGGTGCCCACCCCGCTCATCAAGG
AGACGCAGCGCCTCGACATGAAGTACGTGTGGTCGACCGTCCCCCTGGTG
GTCAAGCTCATCGAGCAGTCCACCGGCATCGCGCCCATCTTCGTGATCCG
ATCCACGGTGCCCCCCGGCATGACCAAGAAGTGGATGGCGGCCGTCAAGG
AGAAGACCGACAAGCCGTTCCACGTGGCCTTCCAGCCGGAGTTCCTCCGC
GCCGTCTCTTGCGAAGAGGACGCCCGGGCGCCATGGCAGGTGGTTTTCGG
CTACATGCCCGGAGAGGAGGACGTGAAGGCCCGCATGGCCAACGCGTTCC
TCGAGTTCGTCGGCCGCGACGAGTCCAAGCTCACCGTGCTCAACATCGCG
GAGGCCGAGTTCATGAAGCTCGTGCACAACTACGCGAACGGGCTTAAGAT
TTCCTTCGCCAACTGCATCTACGGCCTCGCACACGAGCTCGACCCCACGA
TCGACGCCCAGAAGGTGCTATACCTGGTGTCCTCCACGGCGGAGTGCTTC
CTCAGCCGCAAGTACGGCCTTCGCGTGGGCGCCCCGTACGGCGGCGTATG
CCTGCCCAAGGACGTGCCGGAGCTCACCAGCCTCGCACCAGAGGGCTCCG
TGTTCAGGGAGTTCCTGTCGGGCACCGGCAAGATCAACGAGTGGATCTCG
AGCGCTAAGGCCAAGAACATGCGGGTGGAGCTCGACGAGAGCCCCAACTG
GGTGTCCCCCGACGCCCTCATGACCTCCTAA
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