prot_Ecto-sp13_S_contig13742.2945.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13742.2945.1
Unique Nameprot_Ecto-sp13_S_contig13742.2945.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13742.2945.1 vs. uniprot
Match: A0A6H5KC70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC70_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 8.300e-11
Identity = 48/100 (48.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:    1 MVEHAGLQLQHSEQEAQGGLEHGTIRIRRLLGGKLRFGDRAFSSSRRCTGFASNRCSDRLEEGEGGRDSVQWRS---WGFHGNGAAAAGAGGLSAGLFDS 97
            MV HAG   Q SEQE QGG+E     +RRL          A+ +      F+++R S  LEEG GGRDS+QW+S   WG + +GAAAAG GGLS G+F S
Sbjct:    1 MVPHAG--AQGSEQEDQGGVERVEFSVRRLRPRP------AWDAESGGPSFSASRSSVHLEEGRGGRDSMQWQSPTDWGPNRDGAAAAGTGGLSTGVFGS 92
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BLAST of mRNA_Ecto-sp13_S_contig13742.2945.1 vs. uniprot
Match: A0A6H5KMK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK4_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 8.370e-11
Identity = 51/114 (44.74%), Postives = 65/114 (57.02%), Query Frame = 0 
Query:    1 MVEHAGLQLQHSEQEAQGGLEHGTIRIRRLLGGKLRFGDRAFSSSRRCTGFASNRCSDRLEEGEGGRDSVQWRS---WGFHGNGAAAAGAGGLSAGLFDSSSVGFGTGVGGSTM 111
            MV HAG   Q SEQE QGG+E     +RRL          A+ +      F+++R S  LEEG G RDS+ W+S   WG + +GAAAAG GGLS G+F  + +G  TG G S M
Sbjct:   97 MVPHAG--AQGSEQEDQGGVERVEFSVRRLRRRP------AWDAESGGPSFSTSRSSVHLEEGRGDRDSMHWQSPTDWGPNRDGAAAAGTGGLSMGVFGLNGMGLRTGTGRSVM 202
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13742.2945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC70_9PHAE8.300e-1148.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMK4_9PHAE8.370e-1144.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13742contigEcto-sp13_S_contig13742:3846..4289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13742.2945.1mRNA_Ecto-sp13_S_contig13742.2945.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13742 2605..4289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13742.2945.1 ID=prot_Ecto-sp13_S_contig13742.2945.1|Name=mRNA_Ecto-sp13_S_contig13742.2945.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MVEHAGLQLQHSEQEAQGGLEHGTIRIRRLLGGKLRFGDRAFSSSRRCTG
FASNRCSDRLEEGEGGRDSVQWRSWGFHGNGAAAAGAGGLSAGLFDSSSV
GFGTGVGGSTMGGAPVSPASVSAASIAPRWGARTGVGGLTLERAPESP
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