prot_Ecto-sp13_S_contig13741.2944.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13741.2944.1
Unique Nameprot_Ecto-sp13_S_contig13741.2944.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13741.2944.1 vs. uniprot
Match: D8LBK0_ECTSI (Bromodomain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK0_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 2.500e-31
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 
Query:    1 WVIIPPELKTLPAKLLPRFVDLRRGKAADVVKTTPEDGAAALSSALSPSWLRRLYRTPRDLEGDES 66
            WVIIPPELKTLPAKLLPRF DLRRGKAADVVKTTPE+GAA LSSALSPSWLRRLYRTPRD  GDES
Sbjct: 1467 WVIIPPELKTLPAKLLPRFADLRRGKAADVVKTTPEEGAATLSSALSPSWLRRLYRTPRDRAGDES 1532
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13741.2944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBK0_ECTSI2.500e-3192.42Bromodomain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13741contigEcto-sp13_S_contig13741:3688..4319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13741.2944.1mRNA_Ecto-sp13_S_contig13741.2944.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13741 3686..4319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13741.2944.1 ID=prot_Ecto-sp13_S_contig13741.2944.1|Name=mRNA_Ecto-sp13_S_contig13741.2944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
WVIIPPELKTLPAKLLPRFVDLRRGKAADVVKTTPEDGAAALSSALSPSW
LRRLYRTPRDLEGDESSSSSSSSSSSSDSEDSGSD
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