prot_Ecto-sp13_S_contig13707.2920.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13707.2920.1
Unique Nameprot_Ecto-sp13_S_contig13707.2920.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length173
Homology
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: D8LM99_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM99_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 1.970e-102
Identity = 164/173 (94.80%), Postives = 169/173 (97.69%), Query Frame = 0
Query:    1 EDCSEASLRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRDLHYRTRMVEAVPQLASLDEKDVS 173
            ++CSEASLRRITGEEDLRDVRHLALAVDT TTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNC+KD EQAIHLGTCSRLWSLTLTANP+CRD +YR RMVEAVPQLASLDEKDVS
Sbjct:   18 DECSEASLRRITGEEDLRDVRHLALAVDTKTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCLKDAEQAIHLGTCSRLWSLTLTANPLCRDHNYRRRMVEAVPQLASLDEKDVS 190          
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: A0A6H5JTQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ1_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 6.290e-101
Identity = 164/171 (95.91%), Postives = 165/171 (96.49%), Query Frame = 0
Query:    3 CSEASLRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRDLHYRTRMVEAVPQLASLDEKDVS 173
            CSEASLR ITGEEDLRDVRHLALAVDTNTTQVDHLG VLPLL+ELRLERGSVLASFRDLGSSLPNLRVLWLSACGV HLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKD EQAIHLGTCS LWSLTLTANPVCRDLHYR RMVEAVPQLASLDEKDVS
Sbjct:   20 CSEASLRIITGEEDLRDVRHLALAVDTNTTQVDHLGIVLPLLSELRLERGSVLASFRDLGSSLPNLRVLWLSACGVRHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDAEQAIHLGTCSHLWSLTLTANPVCRDLHYRRRMVEAVPQLASLDEKDVS 190          
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: A0A5D6YP06_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YP06_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.030e-44
Identity = 79/173 (45.66%), Postives = 123/173 (71.10%), Query Frame = 0
Query:    1 EDCSEASLRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRDLHYRTRMVEAVPQLASLDEKDVS 173
            +D +E  L++++G++DL  V +L ++VD+    V+ +G +LP L +L+L+  S L SFRDLG+SL +L++LW+   G+  LDG+GALTGL+ELYL +ND+ DL+ + LH+ ++V+DLE NC++D  Q   L  C++L +L L ANPVCR  HYR  +   +PQL +LD+K V+
Sbjct:   97 DDITEDKLQKLSGKQDLARVTYLQISVDSGKQSVEAIGELLPSLQQLKLQN-STLHSFRDLGTSLHSLQILWVIRSGISDLDGIGALTGLQELYLQYNDISDLSPLTLHEEIQVIDLEGNCIEDIGQVEQLAFCAQLTTLNLEANPVCRIAHYRQIIANFLPQLTTLDDKPVA 268          
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: W4G0V7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0V7_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.190e-41
Identity = 85/173 (49.13%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    1 EDCSEASLRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRDLHYRTRMVEAVPQLASLDEKDVS 173
            +D ++  LR+I+G++DL  V +L L VDT+   V+ LG +LP L++LRL + SVL SFRDLG+SL  L++LWL + GV  LDG+GALTGL ELYL FND+ D++ ++LHD L +LDL+ N V+D  Q   LG C +L  L L ANPV    +YR      +PQL +LD   V+
Sbjct:   62 DDITDEKLRQISGKQDLNRVTYLQLTVDTHKQSVEALGELLPSLSQLRLHQ-SVLHSFRDLGTSLHGLQILWLMSSGVKDLDGIGALTGLRELYLQFNDIVDVSPLSLHDELHILDLQGNRVQDIVQIEQLGMCVQLTVLNLAANPVAAIPNYRPIACSYIPQLQTLDTAPVA 233          
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: A0A485KIX1_9STRA (Aste57867_7880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIX1_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.520e-40
Identity = 85/186 (45.70%), Postives = 115/186 (61.83%), Query Frame = 0
Query:    1 EDCSEASLRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQA-------------IHLGTCSRLWSLTLTANPVCRDLHYRTRMVEAVPQLASLDEKDVS 173
            +D +E  LR+I+G++DL  V +L L VDT    V+ LG +LP +T+LRL + S+L SFRDLG+SL  L+VLWL   GV  LDG+GALTGL ELYL FN++ D++ +++HD L V+DL+ NCV+D  Q               H G C  L SL L  NPV     YR  +   +P L  LDE+ V+
Sbjct:   59 DDITEEKLRQISGKQDLNKVNYLQLTVDTQKQSVEALGELLPSMTQLRLHQ-SILHSFRDLGTSLHGLQVLWLMRSGVKDLDGIGALTGLRELYLQFNEIADISPLSMHDELHVIDLQGNCVEDIVQLEQLGRSIQVLSTNYHSGLCPHLASLNLADNPVASIPQYRPIVCSYIPHLEKLDERAVA 243          
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: A0A1V9ZB88_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB88_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.220e-40
Identity = 84/172 (48.84%), Postives = 112/172 (65.12%), Query Frame = 0
Query:    2 DCSEASLRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRDLHYRTRMVEAVPQLASLDEKDVS 173
            D +   LR+++G++DL  V  L L VDT    V+ LG +LP L +LRL   S L SFRDLG+SL +L+VLWL +CGV  LDG+GALTGL ELYL  N + D++ +++HD L V+DLE N V D  Q   LG C +L +L L  NPV     YR+ +   +P LASLD+K V+
Sbjct:   68 DLTHDKLRQLSGKQDLTKVTFLQLTVDTAKQSVEALGELLPSLLQLRLHE-SHLHSFRDLGTSLHSLQVLWLQSCGVTDLDGIGALTGLRELYLQHNAIADISPLSMHDELAVVDLEGNAVLDIVQIEQLGLCPQLSALKLQGNPVAAIPQYRSIVASYIPHLASLDDKPVT 238          
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: A0A7S2GID5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GID5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.020e-40
Identity = 79/155 (50.97%), Postives = 103/155 (66.45%), Query Frame = 0
Query:   20 VRHLALAVDT-NTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRD-----LHYRTRMVEAVPQLASLD 168
            + +L L ++T +   +D LG  LP L  L L R S LAS RDLG+SL NL+VL  S CG+  LDG+GALT +EELYL+FND+ DLT IA+H  ++VLDLESNC+  T Q   L +C++LWSLTLT NP+ R        YR  + + VP L +LD
Sbjct:   23 ITNLTLTINTKHDGPIDELGQFLPQLAHLHL-RSSSLASIRDLGTSLANLKVLNASRCGLKELDGIGALTAMEELYLSFNDIWDLTPIAMHGHVQVLDLESNCIDQTLQLRQLASCAKLWSLTLTGNPIERRHSNNLAAYRQAVCQNVPSLEALD 176          
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: T0SCL0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0SCL0_SAPDV)

HSP 1 Score: 149 bits (377), Expect = 7.700e-39
Identity = 79/172 (45.93%), Postives = 110/172 (63.95%), Query Frame = 0
Query:    2 DCSEASLRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRDLHYRTRMVEAVPQLASLDEKDVS 173
            D +   LR+++G+ DL  V  L L++DT    V+ LG +LP L +LRL   S L SFRDLG+SL +L+VLWL  CGV  LDG+GALTGL ELYL  N + D++ +++HD L V+DL+ N V D  Q   LG C +L +L L  NPV     YR  ++  +P L +LD+K ++
Sbjct:   66 DLTHDKLRQLSGKSDLTKVTFLQLSIDTGKQSVEALGELLPSLLQLRLHE-SKLHSFRDLGTSLHSLQVLWLERCGVTDLDGIGALTGLRELYLNGNCISDISPLSMHDELSVVDLQGNAVMDIVQIEQLGLCPQLTALKLVENPVASIPQYRAIVISYIPHLTALDDKPIT 236          
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: A0A1V9YPU2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YPU2_9STRA)

HSP 1 Score: 147 bits (372), Expect = 6.270e-38
Identity = 80/172 (46.51%), Postives = 115/172 (66.86%), Query Frame = 0
Query:    2 DCSEASLRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRDLHYRTRMVEAVPQLASLDEKDVS 173
            D ++  LR+I+G++DL  V  L + +DT    V+ LG +LP L +L+L + SVL SFRDLG+SL +L+VLW+   GV  LDG+GALTGL ELYL  N++ D++ +++HD L ++DLE+N V D  Q   LG C +L +L L  NPV R   YR  +V  +P L SLD+K ++
Sbjct:  672 DLTQDKLRQISGKQDLAKVTCLEMTIDTVKQSVEALGELLPSLLQLKLHQ-SVLHSFRDLGTSLHSLQVLWVECSGVKDLDGIGALTGLRELYLKGNEIVDISPLSMHDELSIVDLENNQVFDIIQIEQLGLCPQLSALKLLGNPVARIPQYRPIVVNYIPHLKSLDDKAIT 842          
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Match: A0A7S3BZ52_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BZ52_9VIRI)

HSP 1 Score: 137 bits (345), Expect = 3.660e-37
Identity = 76/166 (45.78%), Postives = 105/166 (63.25%), Query Frame = 0
Query:    8 LRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRDLHYRTRMVEAVPQLASLDEKDVS 173
            LR ++G+EDL+ V +L LAVD     ++ +G +LP L EL+L  GS LA+ RDLG+ L  LRVLW+  C V HLDG+GAL  L ELY +FND+ D+  +A  + L  LDLE N V + +Q   L  C+ L +LTL  NPV     YR+ +   VPQL  +D++ V+
Sbjct:    2 LRLLSGKEDLQGVSYLELAVDAEQMPINEMGAMLPSLRELKLT-GSSLATLRDLGTQLTALRVLWIGRCAVAHLDGLGALPALRELYASFNDIADVGGVAELEELHTLDLEGNRV-EADQLEWLAACASLRALTLEGNPVAVRQDYRSAVAGTVPQLEYIDDEPVT 165          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13707.2920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM99_ECTSI1.970e-10294.80Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JTQ1_9PHAE6.290e-10195.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5D6YP06_9STRA3.030e-4445.66Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W4G0V7_9STRA2.190e-4149.13Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485KIX1_9STRA1.520e-4045.70Aste57867_7880 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1V9ZB88_9STRA3.220e-4048.84Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S2GID5_9STRA4.020e-4050.97Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
T0SCL0_SAPDV7.700e-3945.93Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YPU2_9STRA6.270e-3846.51Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A7S3BZ52_9VIRI3.660e-3745.78Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 28..173
e-value: 3.9E-27
score: 96.3
NoneNo IPR availablePFAMPF14580LRR_9coord: 51..172
e-value: 4.9E-8
score: 32.7
NoneNo IPR availablePANTHERPTHR22708:SF0LEUCINE-RICH REPEAT-CONTAINING PROTEIN 56coord: 4..170
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 42..172
IPR040091Leucine-rich repeat-containing protein 56PANTHERPTHR22708UNCHARACTERIZEDcoord: 4..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13707contigEcto-sp13_S_contig13707:2569..4168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13707.2920.1mRNA_Ecto-sp13_S_contig13707.2920.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13707 2569..4168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13707.2920.1 ID=prot_Ecto-sp13_S_contig13707.2920.1|Name=mRNA_Ecto-sp13_S_contig13707.2920.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
EDCSEASLRRITGEEDLRDVRHLALAVDTNTTQVDHLGTVLPLLTELRLE
RGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDV
EDLTSIALHDRLEVLDLESNCVKDTEQAIHLGTCSRLWSLTLTANPVCRD
LHYRTRMVEAVPQLASLDEKDVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR040091LRRC56