prot_Ecto-sp13_S_contig137.2912.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig137.2912.1
Unique Nameprot_Ecto-sp13_S_contig137.2912.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
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BLAST of mRNA_Ecto-sp13_S_contig137.2912.1 vs. uniprot
Match: A0A6H5JS69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS69_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 7.050e-18
Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0 
Query:    1 MIEHDRRFKHVLGSEYTDVTLPGYESLLRRPICVDATAQVLLNGADSADGGGRG 54
            MIE+ R FKHVLGS+ TDV LPGYE LLRRP+ VDATAQ LLN ADSADGG RG
Sbjct:   47 MIEYARSFKHVLGSQDTDVILPGYEGLLRRPMLVDATAQALLNEADSADGGTRG 100
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BLAST of mRNA_Ecto-sp13_S_contig137.2912.1 vs. uniprot
Match: A0A6H5KB14_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB14_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 3.190e-17
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0 
Query:    1 MIEHDRRFKHVLGSEYTDVTLPGYESLLRRPICVDATAQVLLNGADSADGGGRGL 55
            ++EH   FK  LGS  T V LPGYE LLRRP+CVD TAQ LLNGADSADGGG+G+
Sbjct:   63 VVEHALSFKLDLGSGDTVVILPGYEGLLRRPMCVDVTAQALLNGADSADGGGKGI 117
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BLAST of mRNA_Ecto-sp13_S_contig137.2912.1 vs. uniprot
Match: A0A6H5JIG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG7_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 5.120e-14
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0 
Query:    1 MIEHDRRFKHVLGSEYTDVTLPGYESLLRRPICVDATAQVLLNGADSADGGGRGL 55
            +I+H + FK VL SE TDV LPGYE LLRRP+ VD TA+ LLNG + ADGGGRG+
Sbjct:   41 IIQHAKSFKDVLCSEDTDVILPGYEGLLRRPMRVDRTAEDLLNGGEGADGGGRGV 95
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig137.2912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JS69_9PHAE7.050e-1877.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB14_9PHAE3.190e-1769.09Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIG7_9PHAE5.120e-1465.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig137contigEcto-sp13_S_contig137:16925..17809 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig137.2912.1mRNA_Ecto-sp13_S_contig137.2912.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig137 15828..17809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig137.2912.1 ID=prot_Ecto-sp13_S_contig137.2912.1|Name=mRNA_Ecto-sp13_S_contig137.2912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
MIEHDRRFKHVLGSEYTDVTLPGYESLLRRPICVDATAQVLLNGADSADG
GGRGLR*
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