prot_Ecto-sp13_S_contig13683.2902.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13683.2902.1
Unique Nameprot_Ecto-sp13_S_contig13683.2902.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length385
Homology
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: A0A6H5JV52_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV52_9PHAE)

HSP 1 Score: 476 bits (1224), Expect = 9.760e-160
Identity = 333/421 (79.10%), Postives = 342/421 (81.24%), Query Frame = 0
Query:    1 LRVLFRAAPGLRDSIPAREALPTWAQLARFAAAFEPPKPGDAAPLGSGGSSSAKGAWSTAGXXXXXXXXXXXXXXXXXXAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNTPKPASDGXXXXXXADSGMDGVGGQQHGGG-EDDAWLEVGKGGAKAVVNTPDPRKK--------------------------------------LDLDLPSSTSPQNNIWTETVSGGGPXXXXXXXXXAWGSGTGGFDSSNGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAWGGGMD--GAVPPAAGAGITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            ++VLFRAAPGLRDSIPA+EALPTWAQLARFAAAFEPPKPGDAAPLGSGGSSSAKGAWSTAG  XXXXXXXXXXXXXXX AEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKN PKPASDG      ADSG             EDDAWLEVGKGGAKAVVN PDPRKK                                      LDLDLPSS SP+NNIW ET +GGG XXXXXXXX AWGSGTGGFDSSNGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          G VPPA GAG+TVLE+ALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPT+VMSPSLRHEASI+GPLKYRLFTV
Sbjct:  276 VQVLFRAAPGLRDSIPAKEALPTWAQLARFAAAFEPPKPGDAAPLGSGGSSSAKGAWSTAGGRXXXXXXXXXXXXXXXAAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNKPKPASDGGDRGGSADSGTXXXXXXXXXXXXEDDAWLEVGKGGAKAVVNAPDPRKKVSNSSVVTGLFYGMFRSEVKKSGNAKSSVTLEAFHCLQLDLDLPSSPSPRNNIWPETFTGGGXXXXXXXXX-AWGSGTGGFDSSNGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTVPPAPGAGVTVLEAALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTLVMSPSLRHEASIRGPLKYRLFTV 695          
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: D7FJX3_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX3_ECTSI)

HSP 1 Score: 441 bits (1134), Expect = 6.090e-146
Identity = 324/417 (77.70%), Postives = 329/417 (78.90%), Query Frame = 0
Query:    1 LRVLFRAAPGLRDSIPAREALPTWAQLARFAAAFEPPKPGDAAPLGSGGSSSAKGAWSTAGXXXXXXXXXXXXXXXXXXAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNTPKPASDGXXXXXXADSGMDGVGGQQHGGGE-DDAWLEVGKGGAKAVVNTPDPRKK--------------------------LDLDLPSSTSPQNNIWTETVSGGGPXXXXXXXXXAWGSGTGGFDSSNG----------GGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAWGGGMDGAVPPAAGAGITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            ++VLFRAAPGLRDS+PAREALPTWAQLARFAAAFEPPKPG AAPL                XXXXXXXXXXXXXXXXXXAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKN PKPASDG      AD           G GE DDAWLEVGKGGAKAVVN PDPRKK                          LDLDLPSSTSPQNNIWTETVSG    XXXXXXXXAWGSGTGGFDSSNG          GG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        GAVPPA GAG+TVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPT+VMSPSLRHEASIKGPLKYRLFTV
Sbjct:  309 VQVLFRAAPGLRDSVPAREALPTWAQLARFAAAFEPPKPGAAAPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNNPKPASDGGSGGVSADXXXXXXXXXXXGEGEEDDAWLEVGKGGAKAVVNAPDPRKKVTGLFYRMFRSEVKKNGNPQSSVTLELDLDLPSSTSPQNNIWTETVSG----XXXXXXXXAWGSGTGGFDSSNGXXXXXXXXEEGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXGAVPPAPGAGVTVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTLVMSPSLRHEASIKGPLKYRLFTV 716          
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: A0A836CGA5_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.190e-17
Identity = 87/299 (29.10%), Postives = 119/299 (39.80%), Query Frame = 0
Query:   83 VLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNTPKPASDGXXXXXXADSGMDGVGGQQHGGGEDDAWLEVGKGGAKAVVNTPDPRKKLDLDLPSSTSPQNNIWTETVSGGGPXXXXXXXXXAWGSGTGGFDSSNGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAWGGGMDGAVPPAAGAGITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPR-KLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            V P + + +  G+FR A  GEQEDA+EFLA+FL +LH+E+    K   K A         A                DD W EVG+GG  AVVN     ++ +    +  S    ++  T+                             GR                             G    G     PP        LE+ L+A FGGE + GV+G     V+A R   LE  P+VLTL LKQ++FH   G   +  R + YPLEL +P   +    R +A+ +G   YRLF V
Sbjct:  193 VNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERLVKKQAKDAEQHAVLQQAA---------------VDDEWQEVGRGGVAAVVN-----RQAEARAAAVESVITRVFHGTLRSEASHTSQL-------------------GRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPP------LQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSDAAKRGRT-YRLFAV 445          
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: A0A822G0W3_9NEOB (Ubiquitinyl hydrolase 1 n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822G0W3_9NEOB)

HSP 1 Score: 72.4 bits (176), Expect = 1.870e-10
Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = 0
Query:  282 ITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            I  ++ AL +L   E+V G   K   EV+ SR +TLE+ P VL LHLK+F F    G +KL + + YP++L +   + SP +R  + IKG   YRLF V
Sbjct:  179 IRTVQDALESLVARESVQGYTTKTKQEVEVSRRVTLEELPPVLVLHLKRFVFEKTGGCQKLVKNIEYPVDLEISKDLFSPGVR--SKIKGQKTYRLFAV 275          
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: A0A3B3SAU2_9TELE (Ubiquitin carboxyl-terminal hydrolase n=8 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SAU2_9TELE)

HSP 1 Score: 72.8 bits (177), Expect = 3.940e-10
Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 0
Query:  282 ITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            I  ++ AL +L   E+V G   K   EV+ SR +TLE+ P VL LHLK+F F    G +KL + + YP++L +   ++SP +R++   KG   YRLF V
Sbjct:  829 IRTVQEALESLVARESVQGYTSKSKQEVEISRRVTLEELPPVLVLHLKRFVFEKTGGCQKLVKNIEYPIDLEISKDLLSPGVRNKI-FKGQRTYRLFAV 926          
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: UPI001CF3FB86 (ubiquitin carboxyl-terminal hydrolase 10 isoform X1 n=4 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF3FB86)

HSP 1 Score: 72.0 bits (175), Expect = 6.630e-10
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 0
Query:  282 ITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            I  ++ AL +L   E+V G   K   EV+ SR +TLE+ P VL LHLK+F F    G +KL + + YP++L +   ++SP +R +   KG   YRLF V
Sbjct:  694 IRTVQDALESLVARESVQGYTTKTKQEVEVSRRVTLEELPPVLVLHLKRFVFEKTGGCQKLTKNIEYPVDLEISKELLSPGMRSKI-FKGQKTYRLFAV 791          
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: A0A4W4H068_ELEEL (Ubiquitin carboxyl-terminal hydrolase n=6 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4H068_ELEEL)

HSP 1 Score: 71.6 bits (174), Expect = 8.920e-10
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 0
Query:  282 ITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            I  ++ AL ++   EAV G   K   E++ SR +TLE+ P VL LHLK+F F    G +KL + + YP++L +   ++SP +R + ++KG   YRLF V
Sbjct:  718 IRTVQEALESMVAREAVQGYTTKSKQEIEISRRVTLEELPPVLVLHLKRFVFEKTGGCQKLVKNIDYPVDLEISKDLLSPGVRSK-TLKGQRTYRLFAV 815          
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: A0A672NLX5_SINGR (Ubiquitin carboxyl-terminal hydrolase n=7 Tax=Cyprininae TaxID=2743694 RepID=A0A672NLX5_SINGR)

HSP 1 Score: 70.9 bits (172), Expect = 1.590e-9
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 0
Query:  282 ITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            I  ++ AL  L   E+V G   K   E++ SR +TLE+ P VL LHLK+F F    G +KL + + YP++L +   ++SP +R + ++KG   YRLF V
Sbjct:  697 IRTVQEALEVLVARESVQGYTTKSKQEIEISRRVTLEELPPVLVLHLKRFVFEKTGGCQKLVKNIDYPVDLEISKDLLSPGVRGK-TLKGQRNYRLFAV 794          
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: A0A8C1IX38_CYPCA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1IX38_CYPCA)

HSP 1 Score: 70.5 bits (171), Expect = 2.010e-9
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 0
Query:  282 ITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            I  ++ AL  L   E+V G   K   E++ SR +TLE+ P VL LHLK+F F    G +KL + + YP++L +   ++SP +R + ++KG   YRLF V
Sbjct:  625 IRTVQEALEVLVARESVQGYTTKSKQEIEISRRVTLEELPPVLVLHLKRFVFEKTGGCQKLVKNIDYPVDLEISKDLLSPGVRGK-TLKGQRTYRLFAV 722          
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Match: A0A556VUM6_BAGYA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556VUM6_BAGYA)

HSP 1 Score: 70.5 bits (171), Expect = 2.020e-9
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 0
Query:  282 ITVLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTMVMSPSLRHEASIKGPLKYRLFTV 380
            I  ++ AL ++   E+V G   K   E++ SR +TLE+ P VL LHLK+F F    G +KL + V YP++L +   ++SP +R + ++KG   YRLF V
Sbjct:  639 IRTVQEALESMVARESVQGYTTKTKQEIEISRRVTLEELPPVLILHLKRFVFEKTGGCQKLVKNVDYPVDLEISKDLLSPGVRSK-TLKGQRTYRLFAV 736          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13683.2902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV52_9PHAE9.760e-16079.10USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJX3_ECTSI6.090e-14677.70USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CGA5_9STRA1.190e-1729.10USP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A822G0W3_9NEOB1.870e-1041.41Ubiquitinyl hydrolase 1 n=1 Tax=Ranitomeya imitato... [more]
A0A3B3SAU2_9TELE3.940e-1040.40Ubiquitin carboxyl-terminal hydrolase n=8 Tax=Para... [more]
UPI001CF3FB866.630e-1040.40ubiquitin carboxyl-terminal hydrolase 10 isoform X... [more]
A0A4W4H068_ELEEL8.920e-1039.39Ubiquitin carboxyl-terminal hydrolase n=6 Tax=Elec... [more]
A0A672NLX5_SINGR1.590e-939.39Ubiquitin carboxyl-terminal hydrolase n=7 Tax=Cypr... [more]
A0A8C1IX38_CYPCA2.010e-939.39Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cypr... [more]
A0A556VUM6_BAGYA2.020e-939.39Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Baga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 71..155
e-value: 1.6E-6
score: 29.6
NoneNo IPR availableGENE3D3.90.70.10coord: 275..382
e-value: 2.6E-11
score: 45.4
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 100..129
coord: 308..380
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 92..379
e-value: 7.4E-14
score: 51.9
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 86..380

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13683contigEcto-sp13_S_contig13683:244..4153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13683.2902.1mRNA_Ecto-sp13_S_contig13683.2902.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13683 244..4153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13683.2902.1 ID=prot_Ecto-sp13_S_contig13683.2902.1|Name=mRNA_Ecto-sp13_S_contig13683.2902.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=385bp
LRVLFRAAPGLRDSIPAREALPTWAQLARFAAAFEPPKPGDAAPLGSGGS
SSAKGAWSTAGGRNRGGGGGRYHRASSAAAEPVLPDEAMSRAFGAFRAAS
LGEQEDAQEFLAFFLDQLHEEIVDAKKNTPKPASDGGGGGGSADSGMDGV
GGQQHGGGEDDAWLEVGKGGAKAVVNTPDPRKKLDLDLPSSTSPQNNIWT
ETVSGGGPGGGGGGGGSAWGSGTGGFDSSNGGGRGGGGSGGTWGTAGSRG
QRGPGGPAGGRGGGAWGGGMDGAVPPAAGAGITVLESALSALFGGEAVAG
VKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPL
ELTVPTMVMSPSLRHEASIKGPLKYRLFTVGEQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR038765Papain-like_cys_pep_sf