prot_Ecto-sp13_S_contig13682.2901.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13682.2901.1
Unique Nameprot_Ecto-sp13_S_contig13682.2901.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length260
Homology
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: D7FV16_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV16_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 5.970e-94
Identity = 183/259 (70.66%), Postives = 188/259 (72.59%), Query Frame = 0
Query:    1 SSKVVALGAKHQELLQRLPQLEAEITAAVSQHESREVVSAEEARKREVERQQHEDARERIRLAEAXXXXXRAVATQSILDRERERLATEAAHSREERQRVAEQEEVRLAEDKRRREREAQELASSVAVGAAGVEDGLRRIDDACGGNHAEKKAAVQALQQASKAADTPILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFRMQQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLNMELDERF 259
            ++KVVALGAKHQ LL+RLPQLEAEITAAVSQHESRE VSAEEARKREVERQQ             XXXXX                                          + REREAQELASSVAVGAAGVEDGLRRIDDACGG  AEKKAAVQALQQ        ILRNVASNPEDPR+RRIKRDN NFQRALGRFEGGIQILLSSGFRMQ VEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERL MELDERF
Sbjct:   75 TAKVVALGAKHQALLERLPQLEAEITAAVSQHESREAVSAEEARKREVERQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTREREAQELASSVAVGAAGVEDGLRRIDDACGGKPAEKKAAVQALQQ--------ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQ-VEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDERF 324          
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: A0A835YSV6_9STRA (PUB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSV6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 4.950e-35
Identity = 76/146 (52.05%), Postives = 100/146 (68.49%), Query Frame = 0
Query:  115 REREAQELASSVAVGAAGVEDGLRRIDDACGGN--HAEKKAAVQALQQASKAADTPILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFRMQQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLNMELDER 258
            REREA  + +SV VGAAGVE GLR + DACGG    A+ +    AL Q        IL+N+ S+PEDPR+RRI+ +N  F   +GRFEG +Q+LLSSGF++  VEEG ++LVM EPDL+ DMDGWT WY  + + ++RLN E + R
Sbjct:  189 REREAAAIMASVPVGAAGVEAGLRALRDACGGGGGSAQMRKTCGALLQ--------ILQNMRSSPEDPRFRRIRCENERFAADVGRFEGAVQVLLSSGFKVV-VEEGASLLVMAEPDLATDMDGWTTWYDTLKDTIDRLNDETNAR 325          
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: A0A6U3X4B2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X4B2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 9.940e-17
Identity = 52/155 (33.55%), Postives = 82/155 (52.90%), Query Frame = 0
Query:  110 EDKRRREREAQE----LASSVAVGAAGVEDGLRRIDDAC-----GGNHAEKKAAVQALQQASKAADTPILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFRMQQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLNMEL 255
            E++RR E EA+E      +SV  G  GV   +  I +AC     G    E   A+ AL          I   + S PE+P++RRI+RD+  F   +GR  GG +I ++SGFR+  +E G +     EP++  DMDGW++W+  + E ++ +  E+
Sbjct:   72 ENERRAEEEAREADRAFVASVPRGGDGVRAQIGLIREACRSNTDGSGEKEWNTAIGALHT--------IFTQIMSRPEEPKFRRIRRDHPKFLEDVGRHPGGKEIFIASGFRLDNIE-GVSCFFSKEPNIEHDMDGWSDWFNELKETLQIIEEEM 217          
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: G4ZJA0_PHYSP (PUB domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA0_PHYSP)

HSP 1 Score: 82.0 bits (201), Expect = 6.490e-15
Identity = 47/144 (32.64%), Postives = 80/144 (55.56%), Query Frame = 0
Query:  116 EREAQELASSVAVGAAGVEDGLRRIDDACGGNHAEKKAAVQALQQASKAADTPILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFR-MQQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLNMELD 256
            E E ++L +S+  G  G+E  +  + D+ G          +AL + S      ++ N+ S+PE+  +R I ++N +F   LG++ GG Q LL+ GF+ +QQ +E Q   V V+ EPDLSED+D W+ W+  + E    +  +L+
Sbjct:  117 EEEREKLNASIPHGKEGLERAIAMLKDSTGS---------EALYRQSLQKLLAVVSNICSSPENTAFRHIPKENAHFHADLGQYAGGHQCLLALGFKELQQGDEAQLRAVFVLEEPDLSEDLDAWSNWFDELKEMQSFVEYKLN 251          
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: A0A8K1FKC0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKC0_PYTOL)

HSP 1 Score: 81.6 bits (200), Expect = 2.480e-14
Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 0
Query:  124 SSVAVGAAGVEDGLRRIDDACGGNHAEKKAAVQALQQASKAADTPILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFRMQQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLNMEL 255
            +SV VG  G++D +  ++     N  + K     LQ+        ++ NV + PE   YR I +DN +F + +G+++GG + LL+ GF+  + E  + V +M EPDLSED+D W+ W+  + +  E L   L
Sbjct:  209 ASVQVGVEGLQDAISTLET----NLGDPKTFRSVLQKLHV-----LIGNVCAAPEKTEYRHIPKDNAHFHQDIGQYQGGHECLLTMGFKELEPEPTKRVFIMEEPDLSEDLDRWSAWFDGLKDMKELLEQRL 331          
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: A0A833S132_PHYIN (PUB domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S132_PHYIN)

HSP 1 Score: 77.0 bits (188), Expect = 2.630e-14
Identity = 36/90 (40.00%), Postives = 57/90 (63.33%), Query Frame = 0
Query:  169 ILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFR-MQQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLNMEL 255
            ++RN+  +PE+  +R I +DN +F   LG++ GG Q LL+ GF+ +QQ +E Q   V V+ EPDLSED+D W+ W+  + E    +  +L
Sbjct:   26 VVRNICQSPENAAFRHIPKDNAHFHADLGQYPGGHQCLLAMGFKELQQGDETQPRNVFVLEEPDLSEDLDAWSSWFDELKELQSLVESKL 115          
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: A0A7S1YSV5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YSV5_TRICV)

HSP 1 Score: 82.0 bits (201), Expect = 2.920e-14
Identity = 40/134 (29.85%), Postives = 75/134 (55.97%), Query Frame = 0
Query:  122 LASSVAVGAAGVEDGLRRIDDACGGNHAEKKAAVQALQQASKAADTPILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFRMQQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLNMEL 255
              +S+  GA GV + L  + D    + +  + A+ +L          I   +A++PE+ +YRRI+RD+  F   +GR  GG ++L+++GF+++ ++ G +     EPD+  DMDGW+ W+  I + +E +  E+
Sbjct:  273 FVASIKKGADGVREQLAAMRDGTSSDPSGHRKALDSLHM--------IFNQIAAHPEEMKYRRIRRDHPKFMEDIGRHPGGKELLIAAGFKLETLD-GVSCFFSKEPDIENDMDGWSAWFDAIKQTLEIIEEEM 397          
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: F0WG38_9STRA (Uncharacterized protein AlNc14C87G5567 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG38_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.850e-13
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 0
Query:  107 RLAEDKRRREREAQELAS---SVAVGAAGVEDGL----RRIDDACGGNHAEKKAAVQALQQASKAADTPILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFRMQQVE-EGQTVLVMNEPDLSEDMDGWTEWY 241
            +L ED  R + E Q+L +   +V +G  G+   L    R +DD             +AL ++       I+ N+ S PE   YR+I +DN  FQ   G+FEGG   LLS GF+    E E +T+  + EPD++EDMD WT+W+
Sbjct:  198 KLEEDALRSDEELQKLNAQKEAVVLGKEGLRQALLTLERNVDD-------------KALYRSKLDKVHKIVSNICSEPEKELYRKIDKDNYRFQEDFGKFEGGYHFLLSMGFKEVYDEIESKTMFYLEEPDVNEDMDAWTDWF 327          
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: D0NMT9_PHYIT (PUB domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NMT9_PHYIT)

HSP 1 Score: 77.4 bits (189), Expect = 3.100e-13
Identity = 36/90 (40.00%), Postives = 57/90 (63.33%), Query Frame = 0
Query:  169 ILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFR-MQQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLNMEL 255
            ++RN+  +PE+  +R I RDN +F   LG++ GG Q LL+ GF+ +QQ +E Q   V V+ EPDLSED+D W+ W+  + E    +  ++
Sbjct:  161 VVRNICQSPENAAFRHIPRDNAHFHADLGQYPGGHQCLLAMGFKELQQGDETQPRNVFVLEEPDLSEDLDAWSSWFDELKELQSLVESKI 250          
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Match: A0A6A3IUC9_9STRA (PUB domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IUC9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 8.350e-13
Identity = 45/141 (31.91%), Postives = 75/141 (53.19%), Query Frame = 0
Query:  118 EAQELASSVAVGAAGVEDGLRRIDDACGGNHAEKKAAVQALQQASKAADTPILRNVASNPEDPRYRRIKRDNGNFQRALGRFEGGIQILLSSGFR-MQQVEEG--QTVLVMNEPDLSEDMDGWTEWYKHITEAVERLNMEL 255
            E + L +S+  G  G+E  +  +             A +AL + S      ++ N+ S+PE+  +R I +DN +F   LG++ GG Q LL+ GF+ +QQ +E   + V V+ EPDLSED+D W+ W+  + E    +  +L
Sbjct:  209 ERERLNASIPHGKEGLEKAIAML---------RNSTASEALFRQSLQKLLAVVSNICSSPENAAFRHIPKDNAHFHADLGQYAGGPQCLLALGFKELQQGDEAHPRAVFVLEEPDLSEDLDAWSNWFDELKEMQSLVESKL 340          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13682.2901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FV16_ECTSI5.970e-9470.66PUB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YSV6_9STRA4.950e-3552.05PUB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6U3X4B2_9STRA9.940e-1733.55Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
G4ZJA0_PHYSP6.490e-1532.64PUB domain-containing protein n=1 Tax=Phytophthora... [more]
A0A8K1FKC0_PYTOL2.480e-1432.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A833S132_PHYIN2.630e-1440.00PUB domain-containing protein n=1 Tax=Phytophthora... [more]
A0A7S1YSV5_TRICV2.920e-1429.85Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
F0WG38_9STRA1.850e-1335.66Uncharacterized protein AlNc14C87G5567 n=1 Tax=Alb... [more]
D0NMT9_PHYIT3.100e-1340.00PUB domain-containing protein n=1 Tax=Phytophthora... [more]
A0A6A3IUC9_9STRA8.350e-1331.91PUB domain-containing protein n=5 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..82
NoneNo IPR availableCOILSCoilCoilcoord: 11..31
NoneNo IPR availableCOILSCoilCoilcoord: 92..121
NoneNo IPR availableGENE3D1.20.58.2190coord: 142..239
e-value: 1.0E-13
score: 52.7
NoneNo IPR availablePANTHERPTHR46713FAMILY NOT NAMEDcoord: 41..229
IPR018997PUB domainSMARTSM00580PGNneucoord: 169..224
e-value: 2.0E-4
score: 30.7
IPR018997PUB domainPFAMPF09409PUBcoord: 169..232
e-value: 7.3E-13
score: 48.3
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 169..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13682contigEcto-sp13_S_contig13682:279..3364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13682.2901.1mRNA_Ecto-sp13_S_contig13682.2901.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13682 279..3364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13682.2901.1 ID=prot_Ecto-sp13_S_contig13682.2901.1|Name=mRNA_Ecto-sp13_S_contig13682.2901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp
SSKVVALGAKHQELLQRLPQLEAEITAAVSQHESREVVSAEEARKREVER
QQHEDARERIRLAEAEEERRRAVATQSILDRERERLATEAAHSREERQRV
AEQEEVRLAEDKRRREREAQELASSVAVGAAGVEDGLRRIDDACGGNHAE
KKAAVQALQQASKAADTPILRNVASNPEDPRYRRIKRDNGNFQRALGRFE
GGIQILLSSGFRMQQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVER
LNMELDERF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf