mRNA_Ecto-sp13_S_contig1026.279.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1026.279.1
Unique NamemRNA_Ecto-sp13_S_contig1026.279.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 478 bits (1231), Expect = 4.520e-158
Identity = 284/424 (66.98%), Postives = 296/424 (69.81%), Query Frame = 1
Query:   34 MVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDLAELPPDSDANVN---------------------GEGG-----------------AVQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGA 1191
            MVHAIRPSARVPEKK CVTTMRTVKK MME+VSRLIE EQVCITSDGWTSCANDT+MSLT TL+ SAWKLVTLSVDCSKSEGTTTGDALAAGIKA +AKHGLTGKVTAVTTDCEPSMVKMGRLL GDAT ST IGCCN+RLEST+SIVF+GP VKKVMVLARGLVTRY TS  AADRLKQFVKTYLGV NKRVIQDVVT                                                                GSLVVPFI+DLRNSLEDAI+DL ELPPDSDANVN                     G+G                   V VLATALDPRTKI YGVDEDEKADVWKLVQEE VKIAVETRNAENSQ  SSQQGPEAAAGPA S TSAG E+SSRKRPR GG+
Sbjct:    1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT----------------------------------------------------------------GSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTSSQQGPEAAAGPALSSTSAGAEESSRKRPRVGGS 360          
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 4.790e-102
Identity = 212/522 (40.61%), Postives = 294/522 (56.32%), Query Frame = 1
Query:   25 FKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDLAELP----------------PDSDA------NVNGEGGAV-----------------QVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPR----------RGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERL 1443
            F A+V  +   AR P ++A V  MR +KK++  +V+ +++ E V IT+DGWTS +N+++MSLT+  +   W+L  LS++C+K  G+T G+ LA  I + + +HGLTG+VTA  TDCEPSMVK GRLLE   +   HIGC NHR+ESTTS VF+G  +   +  AR +V RY  S   + RL  F+   L +    V+QDV TRW S+ +M  RL+ L     +HE+ D + P+LS  DW VL++I P+L PF   Q  LEG KYVTGS+ VP I +LRN LE AI DL                    PD++A      N  G+G ++                 QV ATA+DPR K LYG+ + E A VW+ V  + V IA E  +++N+  A+S   P  AA P  +P  A   Q + KR R            GA     G          + + V +E+ +F+ + GI ++    +G KVY DPLDWWR R   FPHL  L+RRVLAIP++QA SER+
Sbjct:   34 FHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNT--ATSGSAP--AAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 1.400e-99
Identity = 221/554 (39.89%), Postives = 303/554 (54.69%), Query Frame = 1
Query:   34 MVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDLAELP----------------PDSDA------NVNGEGGAV-----------------QVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSA-----GTEQSSRKRPRRGGARTPQLGEG----------AGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGT---KVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524
            MV A+   A+VP ++  ++ MR VK ++  +V+ +++ E V IT+DGWTS  N+++MSLT+  +   WKL  LS+DC+K  GTTTG+ LAA +   + +H LTG+V A  TDCEPSM+K GRLLE D +  +HIGC NHR+ESTTS VF+G  +   + LAR LV RY  S   A RL Q     L +    V+QDV TRW ST +M  RL+ L     +HE+ D++ PLLS  DW VL++I P+L PF   Q  LEG +YVTGS+ +  + +LR  LE AI DL  +                 PD++A      N  G+G  +                 QV ATALDPR K LYG+ + E A VW+ V    V IA+        +HA  +  P +A  PAS P        G  Q + KRPR                      +       +   V +E++AFK + GI++++  K  T   KV+ +PLD WR +   +P L  L+RRVLAIP++QA+SER+FS AG  VT  R+ L    VE LV LR
Sbjct:    1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIAL-------GKHAGDK-APASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLR 544          
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 6.370e-93
Identity = 206/528 (39.02%), Postives = 282/528 (53.41%), Query Frame = 1
Query:    7 MLADKSFKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDL-----------AELPPD---SDANVNGEGGAV--------QVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524
            M+ ++ F  MV  ++  A VP K+  +  +R +KK + ++V   +  E V +TSDGWTS +NDT+M  T T ++S + LV L V+C K  G TTG+ L   +KA +A++GLT +  A TTDCEPSMVK GRLLE +  G TH+GC  HRLES TS  F GPGV K + LAR +VTRY  S  A+DRL+Q ++  + V  K+V+QDV TRW ST +   RL+ L  P T HE  D + PLL   DW VL+++ P+ +PF  +Q   E  K VT SLV+P+I DLR+ L++A+E L           AE   D   +  +V      V        QVLATALDPR+K LYG++E E +DVW+ V  E VK+A+E +  E++Q A                                         GA SS        + VE  A          +           P D  + + AN    T+   RVL IPA+Q +SER+FS AG +VTK R  + P  VE ++ LR
Sbjct:    1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLE-ENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQ-MRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSA-----------------------------------------GASSSL-------IPVEPAAXXXXXXXXXXDFAAASAV----PGD--KQQSANASSSTS---RVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLR 469          
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 3.180e-86
Identity = 207/542 (38.19%), Postives = 273/542 (50.37%), Query Frame = 1
Query:  148 EQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDL-----------AELPPD-------------------SDANVNGEGGA--------VQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAEN---------------------------------------------SQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524
            E V +TSDGWT  +NDT+MS T T ++S + LV L ++C K    T G+ L   +KA +A++GLTG+  A+TTDCE SMVK GRLLE +  G TH+GC  HRLES TS  F GPGV K + LARG+VTRYT S  A+DRL+Q V   + V  K V+QDV TRW ST     RLI L  P T HE  D   PLL   DW VL+++  +L+PF   Q  LE  K VT  LV P+I DL++ L++A+E L           AE   D                   +D  V  EG           QVLATAL PR+K LYG++E E +DVW     E VK+A+E +  E+                                             +Q A +   P     PA                        Q    + S     + + +  E+ AFK++ G+ +  E+K G +V   PL+WWRV+   +P L +L+RRVL IPA QA+SER+FS AG +VTK R  + P  V  +V LR
Sbjct:    4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLE-ENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQ-VCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSP-IPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEK-GQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLR 541          
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 3.550e-84
Identity = 155/207 (74.88%), Postives = 160/207 (77.29%), Query Frame = 1
Query:  940 VQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRR------------GGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524
            VQVLATALDPRTKILYGVDEDEKADVWKLV+EE VKIAVETRN+ENSQ ASSQQGP                                     GGARTPQL EGA SS   LIT+SVRVELTAFKVSTGIKMYEEDKEG KVYLDPLDWWRVRCA+FPHL NL+RRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVE LVLLR
Sbjct:   78 VQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLR 284          
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 2.260e-65
Identity = 145/347 (41.79%), Postives = 192/347 (55.33%), Query Frame = 1
Query:  181 SCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDL-----------AELPPD-------------------SDANVNGEGGA--------VQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGP 1107
            S +NDT+M+ T T ++S + LV L ++  K  G TTG+ L   +KA +A++GLTG+  A TTDCEP MVK GRLLE +  G +H+GC  HR ES TS  F GPGV K + L RG+VTRYT S  A++RL+Q     + V  K+V+QDV TRW ST                    D + PLL+  DW VL+++ P+L PF   Q  LE  K VT SLV  +I DLR+ L++AIE L           AE   D                   +D  V  EG           QVLATALDPR+K LYG++E E +DVW+ V  E VK+A+E +  E++Q A +   P
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLE-ENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDI-VQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSP 331          
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU)

HSP 1 Score: 158 bits (400), Expect = 7.280e-39
Identity = 146/532 (27.44%), Postives = 239/532 (44.92%), Query Frame = 1
Query:    1 VQMLADKSFKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIE--REQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGL-TGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIE--------LEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIEDL------AELPPDSDA------NVNGEGGAVQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFK--VSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLL 1521
            + M+ D+ FK M++   P   +P +      M    ++   ++  +++  + ++ +T+D WTS A + ++ +T   ++  W+L +  +     E   TG  +AA I+ A+A+  +    + AV  D   ++V    +L+ +  G   + C  H L+   S     P + K +  AR LV  +  S  A+ +LK   K  +G+  K++IQDV TRW+ST  M  RL+E        L  PT        LD  L    WA+L+ +   L+ F +    L G  YVT S + P +  L+ S +   E        A    ++ A       V  +    Q++A ALDPR + L  +  +E+  V   VQ     +A ++   E ++   + +  E+        TS G+  S                 G  SST S   +S   E  A    ++  + MY  +   +K   +PL WW+   A +P L +L+R  L IPAT   SERLFS AGNI +K R +L P  V+ L  L
Sbjct:   29 ISMVEDEGFKQMINTFHPGYTLPSRTHFTKLMEEKYEAAAAKIIDVLKLTKSKIALTADAWTSVATEAYLGITCHFISDDWELTSFCLTTMPLEERHTGVNIAAWIEHAIARFQVPASNIVAVVHDNGSNVVLAANILK-EKRGWNSVCCAGHTLQLVISHALKHPQITKALGAARCLVEHFKRSELASSKLKTKQKQ-MGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLTATLSDPTVTPRGKQHLD--LKPDQWALLEELAKALQAFESATVYLSGETYVTVSALPPLVRGLQKSTQTTYETAPVQAFQAAASQETTACWSREVTVKDDSPDTQIIAAALDPRFRKLKFLTPEERFSVQSKVQ----SLASQSMQEETAKKQCATENEESIT--CFKRTSNGSLDSL---------------FGCDSSTDS---DSETAEQYAQNQAITNEVLMYFGEHPLSKTE-NPLSWWKSNEAKYPSLASLARSFLCIPATSTPSERLFSAAGNITSKKRASLIPEHVDMLTFL 531          
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A669CH32_ORENI (BED-type domain-containing protein n=4 Tax=Ovalentaria TaxID=1489908 RepID=A0A669CH32_ORENI)

HSP 1 Score: 158 bits (399), Expect = 2.930e-38
Identity = 148/530 (27.92%), Postives = 234/530 (44.15%), Query Frame = 1
Query:   25 FKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIER--EQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAK-HGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIE--------LEVPTTMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLR-------------NSLEDAIED--LAELPPDSDANVNGEGGAVQVLATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSA-----GTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLL 1521
            FK M+   +P   +P ++   + M T  ++ +E++   +++   ++ +T+D WTS   ++++ +T   +   W L++ ++     E   T + LAA ++    K H     V A+  D   ++V    +L+ +  G     C  H L+   +     P + K +  ARGLV     S  A+ +LKQ  K  +G    ++IQDV  RW+S+  M  RL+E        L  P         LD  L    W +L  +  VL+P+     +L G+ YVT S++ P +  L              NS ++  E+  L+   P+  A    +G  V ++A ALDPR + L  +  ++   +   VQ E + +  E R+    QH     G EA+A P +   S      GT+             T Q G+G           +VR E+  +    G      D        DPL WW+     FP L NL++  LA+PAT   SERLFS AGNIVTK R +L    VE L  L
Sbjct:  125 FKEMLTTFQPGYTLPSRRHFTSMMETKYETSVEKLRNELKKATSKISLTTDAWTSLVTESYLGVTCHFINDNWDLLSFNLATLPVEERHTAENLAAWVEKVAEKFHISLHNVLAIVHDNASNIVAALHILK-EKFGVVSYRCAGHTLQLVVNHALKDPKIDKALSAARGLVKHIRKSEPASTKLKQKQKQ-MGTAEHKLIQDVAVRWNSSYYMIERLLEQRWPVVATLSDPEVTQRGKQYLD--LKNDQWILLDELKEVLKPYEQATNVLSGQSYVTVSVLPPLLKGLLKSTQNKSFDSAAVNSFQNCAEEEILSRWQPEVSA-FQADGKNVSLIAAALDPRFRKLKFLSPEDALKLQVRVQREALDLKREQRSQLQQQHV----GQEASASPPTKKRSVLDTLLGTDSEEEDC----NENTDQGGDGEN--------EAVRKEVLLYF---GEAPIPRDN-------DPLTWWKNNATRFPTLANLAKSYLAVPATSTPSERLFSVAGNIVTKKRASLTAEHVEMLTFL 623          
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Match: A0A3B1JJI0_ASTMX (Zinc finger BED domain-containing protein 1-like n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A3B1JJI0_ASTMX)

HSP 1 Score: 137 bits (345), Expect = 5.010e-31
Identity = 140/519 (26.97%), Postives = 244/519 (47.01%), Query Frame = 1
Query:   25 FKAMVHAIRPSARVPEKKACVT-TMRTVKKSMMEQVSR-LIEREQVCITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAAGIKAALAKHGLTGKVTA--VTTDCEPSMVKMGRLLEGDATG-STHIGCCNHRLESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*AADRLKQFVKTYLGVHNKRVIQDVVTRWSSTCSMAARLIELE--VPTTMHEAADKLDP----LLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIHDLRNSLEDAIED---LAELPPDSDANVNGE---GGAVQVL--ATALDPRTKILYGVDEDEKADVWKLVQEEVVKIAVETRNAENSQHASSQQGPEAAAGPASSPTSAGTEQSSRKRPRRGGARTPQLGEGAGSSTTSLITNSVRVELTAFKVSTGIKMYEEDKEGTKVYLDPLDWWRVRCANFPHLTNLSRRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVEPLVLLR 1524
            FK ++  + P   +P +    T  + ++ +   E V R L   E + IT+DGWTS A ++++++T   V + W++ +  +       + T D LA  ++ A+ +  L  + T   VTTD   ++V        +A G S HIGC  H +   +        + +++   R +VT +  S  AA  LK   +  L +   ++IQDV TRW+S+  M  R +E +  V + + E   K +      LS  D  VL+ ++ VL+P +   TLL   +  T S+++P  H +  +++ +  D   + ++      N+ G        Q L  +TALDPR K L  +D+  + +++  + E++++           +H +   G   +  P   P +A + + S        A+   L E  G   ++  T     EL    V   I++Y   K    V  +PL WW+     +P+L+ LS+  LA+ AT   SER+FS AG+IVT  R  L+P  V+ L+ L+
Sbjct:  131 FKHLISVLEPRYSIPSRSHLTTKVLPSMYEDTKENVLRGLSNAELIAITTDGWTSRATESYITVTAHYVNNEWEIESPVLQTRPIYESHTSDNLAEVLQEAVLEWKLDRQNTTIPVTTDNAKNIVNAS-----NAAGLSPHIGCFAHTVNLASQKGLGVNQISRLLGKVRRVVTFFHKSTTAAAVLKA-KQEMLQLPPHKLIQDVATRWNSSYDMLTRYLEQQAAVYSALTEKDVKKNAKDLITLSDQDVTVLEDVVEVLKPMKTITTLLSSEQQPTVSMILPLKHSILTAMKHSGTDSQIVKDVKSAIATNIEGRYSNPSLQQFLNESTALDPRFKSLPHLDDPSRKEIFNNLAEKIIQ-----------RHPTQDPGQGTSQNPPEDPETAASSEGSPP------AKRTTLSELFGDFYSTAPTTPTTPELWPDVVKEEIELYRMAKV-ISVDANPLKWWKNNEHQYPNLSKLSKHYLAVQATSVASERVFSTAGDIVTAQRAALSPDNVDILIFLK 625          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1026.279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7Y8_9PHAE4.520e-15866.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUY5_9PHAE4.790e-10240.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI1.400e-9939.89Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JJV8_9PHAE6.370e-9339.02Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE3.180e-8638.19Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JWI1_9PHAE3.550e-8474.88Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE2.260e-6541.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A671UN90_SPAAU7.280e-3927.44Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sp... [more]
A0A669CH32_ORENI2.930e-3827.92BED-type domain-containing protein n=4 Tax=Ovalent... [more]
A0A3B1JJI0_ASTMX5.010e-3126.97Zinc finger BED domain-containing protein 1-like n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1026contigEcto-sp13_S_contig1026:4207..5877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score159.5
Seed ortholog evalue1.5e-36
Seed eggNOG ortholog2880.D8LCS5
Model size1524
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
Cds size546
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462519.42255-UTR-Ecto-sp13_S_contig1026:4206..45441681462519.42255-UTR-Ecto-sp13_S_contig1026:4206..4544Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1026 4207..4544 -
1681462519.4397564-UTR-Ecto-sp13_S_contig1026:4580..48291681462519.4397564-UTR-Ecto-sp13_S_contig1026:4580..4829Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1026 4581..4829 -
1681462519.4516435-UTR-Ecto-sp13_S_contig1026:4940..53251681462519.4516435-UTR-Ecto-sp13_S_contig1026:4940..5325Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1026 4941..5325 -
1681462519.481635-UTR-Ecto-sp13_S_contig1026:5871..58771681462519.481635-UTR-Ecto-sp13_S_contig1026:5871..5877Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1026 5872..5877 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462519.468347-CDS-Ecto-sp13_S_contig1026:5325..58711681462519.468347-CDS-Ecto-sp13_S_contig1026:5325..5871Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1026 5326..5871 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1026.279.1prot_Ecto-sp13_S_contig1026.279.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1026 5326..5871 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1026.279.1

>prot_Ecto-sp13_S_contig1026.279.1 ID=prot_Ecto-sp13_S_contig1026.279.1|Name=mRNA_Ecto-sp13_S_contig1026.279.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MLADKSFKAMVHAIRPSARVPEKKACVTTMRTVKKSMMEQVSRLIEREQV
CITSDGWTSCANDTHMSLTLTLVASAWKLVTLSVDCSKSEGTTTGDALAA
GIKAALAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATGSTHIGCCNHRL
ESTTSIVFSGPGVKKVMVLARGLVTRYTTSR*
back to top

mRNA from alignment at Ecto-sp13_S_contig1026:4207..5877-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1026.279.1 ID=mRNA_Ecto-sp13_S_contig1026.279.1|Name=mRNA_Ecto-sp13_S_contig1026.279.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1671bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1026:4207..5877- (Ectocarpus species13 EcNAP12_S_4_19m)
GTACAGATGCTAGCGGATAAAAGCTTCAAGGCTATGGTACACGCCATACG CCCAAGTGCCAGAGTCCCAGAGAAGAAAGCCTGCGTGACCACCATGCGTA CTGTCAAGAAGTCCATGATGGAGCAGGTGTCAAGACTGATCGAGCGCGAG CAAGTTTGCATCACCTCCGACGGCTGGACCTCTTGCGCCAACGACACCCA CATGTCGCTGACGCTCACCCTTGTCGCCAGTGCCTGGAAGCTCGTCACTC TCTCGGTGGACTGCAGTAAGTCGGAAGGAACGACGACAGGTGATGCTCTT GCTGCTGGTATCAAAGCCGCGCTGGCGAAGCATGGTCTGACTGGCAAGGT CACCGCCGTTACAACTGACTGTGAGCCTTCAATGGTGAAGATGGGGCGCC TTCTCGAAGGAGATGCTACCGGCTCCACCCACATCGGCTGCTGCAACCAC CGGCTTGAAAGCACCACCTCCATCGTCTTCAGCGGTCCGGGGGTCAAAAA GGTCATGGTATTGGCCCGCGGCTTGGTAACGCGATACACGACATCGAGAT AGGCGGCCGACAGGCTCAAGCAGTTTGTCAAGACCTACCTTGGTGTTCAC AACAAGCGGGTGATCCAGGACGTGGTCACCAGGTGGTCGTCCACATGCAG CATGGCAGCGCGACTGATAGAGCTTGAGGTACCTACTACGATGCACGAGG CGGCGGACAAGCTGGACCCGCTACTTTCGGCGGCAGACTGGGCGGTTCTT AAGATGATATTGCCTGTCCTGGAACCGTTCAGGAACACCCAGACTTTGCT TGAGGGCCGCAAGTATGTGACGGGTAGCTTAGTGGTACCTTTCATCCACG ACCTCCGCAACAGCCTCGAGGACGCGATCGAAGATCTCGCCGAGCTACCG CCGGACTCGGACGCCAATGTGAACGGCGAGGGCGGCGGTGATGCCGTGCA TCAAGGCGCTCCGCGACGATTTCATCAACCGGTGGGGAGACGGACGCGAC ATCCTGATCTACAAGGAGGGCCCCAGGCGGCAATCAGGTGGTTTTAAGCT GTGCAGGTGCTAGCAACCGCGCTCGACCCTCGCACGAAGATCCTGTATGG AGTGGACGAGGACGAGAAGGCCGACGTTTGGAAGCTCGTGCAGGAAGAGG TGGTGAAGATCGCGGTAGAAACCCGCAATGCGGAGAACTCTCAGCACGCC TCGTCGCAGCAGGGACCAGAAGCAGCGGCAGGACCGGCATCATCGCCCAC CAGTGCGGGCACAGAACAATCCTCGAGAAAGCGCCCGCGCCGTGGTGGTG GTGGGTTCATGGCGGCGGCGCAAGCGGTCGGAGGCGCACGAACCCCGCAG CTGGGCGAAGGCGCTGGTAGCTCCACCACTAGCCTCATCACGAACTCGGT GCGGGTCGAGCTCACGGCCTTCAAGGTGTCCACAGGTATCAAGATGTACG AGGAAGACAAGGAAGGCACAAAGGTCTACCTTGACCCCTTGGACTGGTGG CGGGTACGGTGCGCAAACTTCCCGCACTTGACCAACCTCTCCCGCCGTGT GCTGGCGATCCCCGCCACTCAGGCAGAGTCCGAGCGTCTGTTTTCCTGCG CTGGAAACATCGTCACGAAGAATCGCAACAACTTGGCCCCGACCACCGTC GAGCCGCTCGTCCTTCTGCGC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1026:4207..5877-

>mRNA_Ecto-sp13_S_contig1026.279.1 ID=mRNA_Ecto-sp13_S_contig1026.279.1|Name=mRNA_Ecto-sp13_S_contig1026.279.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1026:4207..5877- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTAGCGGATAAAAGCTTCAAGGCTATGGTACACGCCATACGCCCAAG
TGCCAGAGTCCCAGAGAAGAAAGCCTGCGTGACCACCATGCGTACTGTCA
AGAAGTCCATGATGGAGCAGGTGTCAAGACTGATCGAGCGCGAGCAAGTT
TGCATCACCTCCGACGGCTGGACCTCTTGCGCCAACGACACCCACATGTC
GCTGACGCTCACCCTTGTCGCCAGTGCCTGGAAGCTCGTCACTCTCTCGG
TGGACTGCAGTAAGTCGGAAGGAACGACGACAGGTGATGCTCTTGCTGCT
GGTATCAAAGCCGCGCTGGCGAAGCATGGTCTGACTGGCAAGGTCACCGC
CGTTACAACTGACTGTGAGCCTTCAATGGTGAAGATGGGGCGCCTTCTCG
AAGGAGATGCTACCGGCTCCACCCACATCGGCTGCTGCAACCACCGGCTT
GAAAGCACCACCTCCATCGTCTTCAGCGGTCCGGGGGTCAAAAAGGTCAT
GGTATTGGCCCGCGGCTTGGTAACGCGATACACGACATCGAGATAG
back to top