prot_Ecto-sp13_S_contig135.2783.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig135.2783.1
Unique Nameprot_Ecto-sp13_S_contig135.2783.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length494
Homology
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BLAST of mRNA_Ecto-sp13_S_contig135.2783.1 vs. uniprot
Match: A0A6H5L294_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L294_9PHAE)

HSP 1 Score: 888 bits (2295), Expect = 0.000e+0
Identity = 462/494 (93.52%), Postives = 466/494 (94.33%), Query Frame = 0 
Query:    1 MVRTRANRLAFAFLVVSTATAADEIVTDNCCDSRDGNACCPGLPIVDEAANQPLLKESKLKVVYDPARCCSDGFETAVGCTAYGAAGCSFCRDACDKDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDAVSDDTDDLWVLLDDDKFDENIVASQSPGSYDFSDDPEQYDCSTCSWDGMSRLEQRILTQRSRSMVCDTTCLKDVGDPSYGVTLCNYFNAGKECRACCHEGFMVDGCMPCDGEGSCNSCITKIKKMCDQNPCEPECQAYVCCSVQWGEYSGCEETMHHEMAEIAAKISDRCNLLFTCDAINPICSTNARRCVAEPTAVSKDVQQATHERCRELAITGAGIFDTTYSSAESFSNEILFMAVDGQQFALQSVEIDACTDLDKLPFIIEASADVIVARSSTGYLAWDDGTDPHPHVANTGVGCPRHVWILQDTTGNQNHVFITVDLSEHPQFISSDWVKVDSEGKMSRTDLNLSCTKKKK-SVRF 493
            MVRTRANRLAFAFLVVSTATA DEIVTDNCC SRDGNACCPGLPIVDEAAN PL +ESKLKVVYD ARCCSDGFETAVGCTAYGAAGCSFCRDACD DD     XXXXXXXXXXXXXXXXXXXXXXXXXX        +DLWVL  DDKFDENIVASQSPGSYDFSDDPEQYDCSTCSWDGMSRLEQRILTQRSRSMVCDTTCLKDVGDPSYGVTLCNYFNAGKECRACCHEGFMVDGCMPCDGEGSCNSCITKIKKMCDQNPCEPECQAYVCCSVQWGEYSGCEETMHHEMAEIAAKISDRCNLLFTCDAINPICS NARRCVAEPT VSKDVQQA HERCRELAITGAGIFDT YSSAESFSNEILFMAVDGQQFALQSVEIDACTDLDKLPFIIEASAD+IVARSSTGYLAWDDGTDPHPHVANTGVGCPRHVWILQDTTGNQNHVFITVDLSEHPQFISSDWVKVDSEGKMSR DLNLSC KKKK +VRF
Sbjct:    1 MVRTRANRLAFAFLVVSTATA-DEIVTDNCCGSRDGNACCPGLPIVDEAANLPLPEESKLKVVYDSARCCSDGFETAVGCTAYGAAGCSFCRDACDTDDESCVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDLWVLFGDDKFDENIVASQSPGSYDFSDDPEQYDCSTCSWDGMSRLEQRILTQRSRSMVCDTTCLKDVGDPSYGVTLCNYFNAGKECRACCHEGFMVDGCMPCDGEGSCNSCITKIKKMCDQNPCEPECQAYVCCSVQWGEYSGCEETMHHEMAEIAAKISDRCNLLFTCDAINPICSINARRCVAEPTGVSKDVQQAAHERCRELAITGAGIFDTAYSSAESFSNEILFMAVDGQQFALQSVEIDACTDLDKLPFIIEASADIIVARSSTGYLAWDDGTDPHPHVANTGVGCPRHVWILQDTTGNQNHVFITVDLSEHPQFISSDWVKVDSEGKMSRVDLNLSCIKKKKKTVRF 493
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig135.2783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L294_9PHAE0.000e+093.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..493
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.793

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig135contigEcto-sp13_S_contig135:727..5771 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig135.2783.1mRNA_Ecto-sp13_S_contig135.2783.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig135 438..5771 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig135.2783.1 ID=prot_Ecto-sp13_S_contig135.2783.1|Name=mRNA_Ecto-sp13_S_contig135.2783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=494bp
MVRTRANRLAFAFLVVSTATAADEIVTDNCCDSRDGNACCPGLPIVDEAA
NQPLLKESKLKVVYDPARCCSDGFETAVGCTAYGAAGCSFCRDACDKDDE
SCVLCTVADSSGAKAATVSTSNESDDEDDSFDAVSDDTDDLWVLLDDDKF
DENIVASQSPGSYDFSDDPEQYDCSTCSWDGMSRLEQRILTQRSRSMVCD
TTCLKDVGDPSYGVTLCNYFNAGKECRACCHEGFMVDGCMPCDGEGSCNS
CITKIKKMCDQNPCEPECQAYVCCSVQWGEYSGCEETMHHEMAEIAAKIS
DRCNLLFTCDAINPICSTNARRCVAEPTAVSKDVQQATHERCRELAITGA
GIFDTTYSSAESFSNEILFMAVDGQQFALQSVEIDACTDLDKLPFIIEAS
ADVIVARSSTGYLAWDDGTDPHPHVANTGVGCPRHVWILQDTTGNQNHVF
ITVDLSEHPQFISSDWVKVDSEGKMSRTDLNLSCTKKKKSVRF*
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