mRNA_Ecto-sp13_S_contig1344.2742.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1344.2742.1
Unique NamemRNA_Ecto-sp13_S_contig1344.2742.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1344.2742.1 vs. uniprot
Match: D7FHS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS0_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 1.300e-172
Identity = 257/313 (82.11%), Postives = 277/313 (88.50%), Query Frame = 1 
Query:    1 MSPRSTQSRNSEKSQVQPTSSEGEEVSRRPLVVTIVVTFVFYLASLTASYGDCFIGSTLRPGRAATIAACLIVREDDGHWYTWCALYRTFTAT*CIATVLCSFAMLVLAVPAGSRRFARCMGIAMRVLLACSVFFHLVAACLAASVYVHLRIHHPHHDGSGFPAILLGPTFVLAWGAILIALVEISLLRISHPESRGTGPHQEPPFHLRHIYTRNHRKSRFRVLFGIACRIVAFDVTILVKYVDASGLTSPGLQSIPLILCASSVISLVWSASHKQATKGKCCILGLGVMASLFYLQTRFTTGMLGWAHIDEE 939
            M+ RSTQSRNSE+SQVQPTSSEGEEVSRRPLVVTIV  F + L+ + A+  D FIGSTLRPGRA+T+AAC+IV E+DGHWYTWCALYRTFTAT CIATVLCSFA LVLAVPAGSR+ AR  G AMRVLLACSVFF LVAACLAASVYVHLRIH P+HDGSGFPA+LLGPTFVLAWGAIL+ALVEISLLRISHPESRGTGPHQEPPF+LRHIYTRNH KSRF VL GI   IV FDVT LV YVDASGL+SPGLQSIPL+ C SSVI LVWSASHKQATKGKC +LGLGV+ASLFY QTRF  GMLGWA+ DEE
Sbjct:    1 MNSRSTQSRNSEESQVQPTSSEGEEVSRRPLVVTIVGLFAWVLSVIAAADDDWFIGSTLRPGRASTLAACVIVHEEDGHWYTWCALYRTFTATQCIATVLCSFATLVLAVPAGSRKCARRTGNAMRVLLACSVFFQLVAACLAASVYVHLRIHRPYHDGSGFPAMLLGPTFVLAWGAILVALVEISLLRISHPESRGTGPHQEPPFYLRHIYTRNHPKSRFWVLLGIGSLIVVFDVTTLVNYVDASGLSSPGLQSIPLVFCVSSVIFLVWSASHKQATKGKCFVLGLGVLASLFYPQTRFVMGMLGWANADEE 313
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1344.2742.1 vs. uniprot
Match: A0A6H5K3M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M8_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 1.070e-77
Identity = 138/179 (77.09%), Postives = 145/179 (81.01%), Query Frame = 1 
Query:  262 RTFTAT*CIATVLCSFAMLVLAVPAGSRRFARCMGIAMRVLLACSVFFHLVAACLAASVYVHLRIHHPHHDG----------------SGFPAILLGPTFVLAWGAILIALVEISLLRISHPESRGTGPHQEPPFHLRHIYTRNHRKSRFRVLFGIACRIVAFDVTILVKYVDASGLTS 750
            RTFTAT  IATVLCSF  L+LAVPAGSRRFAR MGI M+VLLACSVFF LVAACLAASVYVHL+IH P+HDG                SGFPA+LLGPTF LAWG+ LIALVEISLLRISHPESRGTGPHQEPPFHLR+IY RNH KSRF VLFGI   IVAFDVT LV YVDASGLTS
Sbjct:    9 RTFTATQFIATVLCSFTTLLLAVPAGSRRFARRMGIVMKVLLACSVFFQLVAACLAASVYVHLKIHIPYHDGRTSVRVASPTPTAYTGSGFPAMLLGPTFALAWGSTLIALVEISLLRISHPESRGTGPHQEPPFHLRNIYNRNHPKSRFWVLFGIGSLIVAFDVTTLVNYVDASGLTS 187
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1344.2742.1 vs. uniprot
Match: D8LH50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH50_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.690e-20
Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = 1 
Query:  538 IALVEISLLRISHPESRGTGPHQEPPFHLRHIYTRNHRKSRFRVLFGIACRIVAFDVTILVKYVDASGLTS 750
            +ALVEI LLRISHPESRG GP QEPPF+LRHIYTRNH KSR  V+FGI   +VA +VT +V Y D  G+ S
Sbjct:    1 MALVEIFLLRISHPESRGNGPQQEPPFYLRHIYTRNHPKSRVLVVFGIGSLVVASEVTTVVNYADGPGVMS 71
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1344.2742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHS0_ECTSI1.300e-17282.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3M8_9PHAE1.070e-7777.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH50_ECTSI1.690e-2067.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1344contigEcto-sp13_S_contig1344:1605..7802 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1799
Hectar predicted targeting categorysignal peptide
Exons8
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-07_006550.1
Cds size1128
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1344.2742.1prot_Ecto-sp13_S_contig1344.2742.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1344 4881..7443 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462717.6789894-UTR-Ecto-sp13_S_contig1344:1604..16401681462717.6789894-UTR-Ecto-sp13_S_contig1344:1604..1640Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1344 1605..1640 +
1681462717.6896667-UTR-Ecto-sp13_S_contig1344:3421..34971681462717.6896667-UTR-Ecto-sp13_S_contig1344:3421..3497Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1344 3422..3497 +
1681462717.6998072-UTR-Ecto-sp13_S_contig1344:3513..35491681462717.6998072-UTR-Ecto-sp13_S_contig1344:3513..3549Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1344 3514..3549 +
1681462717.7094908-UTR-Ecto-sp13_S_contig1344:4352..44631681462717.7094908-UTR-Ecto-sp13_S_contig1344:4352..4463Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1344 4353..4463 +
1681462717.718135-UTR-Ecto-sp13_S_contig1344:4827..48801681462717.718135-UTR-Ecto-sp13_S_contig1344:4827..4880Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1344 4828..4880 +
1681462717.7633266-UTR-Ecto-sp13_S_contig1344:7443..78021681462717.7633266-UTR-Ecto-sp13_S_contig1344:7443..7802Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1344 7444..7802 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462717.7267272-CDS-Ecto-sp13_S_contig1344:4880..50431681462717.7267272-CDS-Ecto-sp13_S_contig1344:4880..5043Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1344 4881..5043 +
1681462717.7359233-CDS-Ecto-sp13_S_contig1344:5367..56401681462717.7359233-CDS-Ecto-sp13_S_contig1344:5367..5640Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1344 5368..5640 +
1681462717.7451215-CDS-Ecto-sp13_S_contig1344:6370..65621681462717.7451215-CDS-Ecto-sp13_S_contig1344:6370..6562Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1344 6371..6562 +
1681462717.753826-CDS-Ecto-sp13_S_contig1344:6943..74431681462717.753826-CDS-Ecto-sp13_S_contig1344:6943..7443Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1344 6944..7443 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1344.2742.1

>prot_Ecto-sp13_S_contig1344.2742.1 ID=prot_Ecto-sp13_S_contig1344.2742.1|Name=mRNA_Ecto-sp13_S_contig1344.2742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=376bp
MLVLAVPAGSRRFARCMGIAMRVLLACSVFFHLVAACLAASVYVHLRIHH
PHHDGSGFPAILLGPTFVLAWGAILIALVEISLLRISHPESRGTGPHQEP
PFHLRHIYTRNHRKSRFRVLFGIACRIVAFDVTILVKYVDASGLTSPGLQ
SIPLILCASSVISLVWSASHKQATKGKCCILGLGVMASLFYLQTRFTTGM
LGWAHIDEEVRDSLRDSLRDGMRDLWLWPLVLNLFYLGGLVFIWVIDIIA
FCKYRRGEQDLPRHHERSLQPREDRFRHWRSTATPAKATTRPPTGVHAAA
AAAAAAAPGTSGERTTSRLSVGGDLALLTTVGGHEQLGSSIVWSAAPVGQ
HIEAAPVSASVSVTRAAVSPRLPAQ*
back to top

mRNA from alignment at Ecto-sp13_S_contig1344:1605..7802+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1344.2742.1 ID=mRNA_Ecto-sp13_S_contig1344.2742.1|Name=mRNA_Ecto-sp13_S_contig1344.2742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6198bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1344:1605..7802+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCCCGCGGAGCACTCAATCCCGTAATTCCGAGGTAAGGGCTGCAGC
TGCATCGGGCTAAACATATCAGTCTAATAGTCTGCTGCTGTGGTCTACAT
TCAGCAGTGCATGCTGCTGTACGTATACAAAGCACTGACGTCGAGAGAGA
CTTACGTCTATACACAACGTGCCGTGGTCGTACCTCTTGTGGTTTGTGCT
TGCTGAGAGAGAGGAAGGCAAAGAAACCCCACCCCGCCAGCCCCACTGAG
ACCAGCTGAGACGGTCGCTATGAGGTTGTAACTGCCAGCACCTCTTTGCA
AGTACTGCTGTACTGCTGTAGGCTGAGCAGAGCATGCCGCATTTCGGGAA
CGCGTGCTCGCCCACTTCGCGGCCGCTAGGCCGTGCGTTGGCCGTGGGTG
AGGGGTAGGATCAAAGGTTAGGGTTGGGTTGGGGTAAGGAGCCTAGCCTT
GCCCGTGTGAGGAACCTAGGTTCAACATCGGTTGGACTGAAAGAGCCACA
ATCAAAGTGTATTCTCGCGCAGTGTACTTGCGGACTTCTCACTTGAACGT
TCTTGCGAGCATCCTGCACGAGGCGTGTAGATGTAACCGTCGGGGAGATG
GCACCAGGGTGCGCGAAAACGAAAATAGACATTGAGCCTGTCAACCACAG
GAGAGCATCCCTGTATACTGCTCGGGGATTCGTCCGACACAGGTAGTGCT
CCGCCGCTATCTCTGTGAATATTCATCCCTGTATACTGCTCGGGGATTCG
TCCGACACAGGTAGTGCTCCGCCGCTATCTCTGTGAATATTCATTGCAAA
TCCTATAGGAGACCCTCTTTGGATAGAGCTGGAGTTGCTGCGTTACTCGC
TGTTGATTGGTCCTAGACCTACAGTAGTGCTGCTGGCGGAGCACGACTGT
CCCGGTTGACAGGGGTGAAGAGATGGTAAAGTCGTTTTTTCGGTAGTCCC
TTGTGGACAAGCAACAGGAGAGAGTGCATCACAAACATCAAAGCACTCCA
GCAAAGAAGCCACAAGAATTTTCACCGTCGGAATGACGCACCCGCAAAAA
TTAGTGTACGTCGGGAGATACCCCGATCGTCTACGTCCGTGGAACGGCCA
CCCGTTGCATTACTTCCATCACTTCTCAAACCACACATGATGAGCACTGC
CGCCGCAGCAACCTTCGTTAGGAGGATATAGTTCACCTCACGACCATACT
CAATATGCGTTACGGTTGAAACAAAACCCGGCTTGATTGAATTCGATTTC
CGCTCCAGTAACGGATGCAATCTCACCGACCCCCAAACCTCATTTTGACC
TGCCGTAAAGGAGGTAGGCTACATGCATGTGAGTCCTTTCTCTCATGTAC
ACACTTCGAAGTATGTGGTAATGGTGTATTGAGCGTAGCACCACTCCTAC
GAACGATTGTGGTTCACGCGGTATGTGAGTCAAGTTGCTTTCATTCACTT
GATATTCAAGTTGCAAACCGTACAGAAAGCCGGATATGCACGCGGTGTAC
TGTTAGTTGTCGCGACTCGAGCCGCTGGTATATGGGCACGTCCGCTTCAG
AAGATCGGCTGCTTGACTCAACAGAACAGACGGTTGATCGACATGGCTTG
CCACCATATTCAGATAGGGGCCCACACAAACGAACCGCCCACGAAAGCTA
CCACCCAGGCGCAACTCCAACCCTTTCGTACTCTTTGTGTTGGCAGTGCA
GGTGTATATTTAGGATCCTCTCAGAGATTGTTTCGGTAAAAATGGGTACC
TTCCTTCCAAATAACATAATATCGGTTGTTTTTTGGCCCACAATGTTTGC
GTCCTCTCGATTTTCAGAAGTCCCAGGTCCAGCCCACTTCCTCCGAAGGC
GAGGAAGTTTCCAGGCGACCGTTAGTGGTGACAATTGTTGTGAGTGTTCC
TCGGGGCAGCTTTCGTTTTTTACTTGGCCAGCCTAACAGCTTCATGTGGA
ATCATGATTCCGTAGGTGTACCCTGGGACTGGGTTTCAAAATAATGATGA
AGAACGGAGACAGCAGAGAAACGCCCGCGAGCAGACACTTGCGCCGCCGC
CGCAGCCGCCGCTGCTGCTGCTGCTGTTGCCTCTTTGGGCCTCCGCGTTT
TTCCCTCCCAACGGCCAAGAGCGCCAAAGTTTGGCGTAGGTGCATGGGGA
ACGTCTTGGTACAGTACACTGCCAACGAAGAAGGAGAATGAATCTGGTCG
CCATCTCAAGATTTCATACATCCTCCTGTGATACAGTAGAGTCCCGCAGC
AAGCGCTGGGTATCGCCATGGTGTCGCCCAGCCTAACCGCAATGCAGCAC
ATGTGGCACGACTAAGGTTCCTCGTGTGATTCTTGTTGGCTGGACATTTT
TTCGATCGCCGTTGAGCCCGCTCCGTCTTGTGTGACACCGCTCGGCTCTG
GTCGAAGATATCGAGCCCAGCAGCATCTTTTGTGTCTCTCACCCTTTCAA
GAGCGCAGAAAAATTGGCCTTTGTAGCCGGCGGGCCTGCGCGATGCAAGG
CAGTCCTGACTGATGGTAACGACAGCCGGGGTGAAGTGTGGCATGTTTCA
AGCGAACACATGCAAACACATTACAGAAGGCAGAAACCGGAAACTGATAT
GTAGCAGCACAAACGTAATAATTCGACAAGTGAAGCGACCCCACCCGCTG
GGTGCATGAAATCGAACAGCCTTCTACCCTACCCTGCCAGCTCGATCACA
CGCGGGGTCTCTTCGTTCGGGTATTCAGCGTGATCGCTGCGTAGACAGAT
GGCGACTGTTTCATCGGGAGTACCCTCAGGCCAGGCAGAGCGGCAACGAT
AGCGGCTTGTCTCATTGTACGTGAGGACGACGGACACTGGTACACGTGGT
GTGCTCTCTGTAAGTGTCACGTTACGAACTAAGCGGTTGATGGAGAAAAT
GAACATTTGTTTGTGCTCGCGATAGATATCTACCTGGCGAAGGTTTCTCC
AGCATGAAGAAACTACCTACCTTAAATTGTGGCGTTCTTGCAGGGTGGCC
CTAGCTTAAACGCAGTCGGCCTGGACAGAGCTACAGGCACAAATCAGGCC
CATGATATGGAAAGGCACGCCTGGTTTGGCTATGAAACAACGCAAGAGGC
ACATGGCTGCCCCACCCGACTTTCAGACGAACCTCTCGAGCTCTTGACAA
TACTTACCAAGCGCCAAAAAATCGAAAAAAACGAAGTACACATCCTACCG
TTTATCATCCCTCAAATACGCAGATCGCACCTTCACCGCGACGTAGTGCA
TCGCCACTGTGCTATGCTCCTTTGCTATGCTGGTGTTGGCGGTTCCCGCG
GGTTCGAGAAGGTTTGCAAGGTGCATGGGGATCGCGATGAGGGTGCTGCT
AGCGTGCTCTGTTTTCTTCCACCTGGTGGCGGCCTGTCTGGCGGCGAGTG
TCTATGTTCACCTGAGGATCCACCATCCACACCACGACGGTAGGGTATGT
AGCCAAGGTTTTGGTGTTTTTTTCCCGTCCCATCTTCAGCCCCAAGAGTT
TCATGACTAATGTCACAAGCGAAGCGCGCTGTACGAAACATGCGGTCTTT
TGGGGTTGAGGGCAGTGGAAGAGCTGAGTGTTAGTGGTACAGAAAAACCT
GACAACTGTTGTAGGTAGATAAGCTCGGCTCGGACCTTCGTCGCGATAGA
CGCCTGGTGACAAAAAGCTACACCCCCTGCGCCAAAATTCAAAACTCCCG
ATTTGTCCTCAAAACTGCCGCCATCTGTGCGTGTCGCCTCACCAGTTCCA
ACCGCATACACAGGTAGCGGCTTTCCTGCGATTCTACTGGGACCGACATT
CGTCCTCGCTTGGGGGGCAATCTTGATAGCTCTCGTGGAGATATCCCTCC
TGCGTATCTCCCATCCGGAATCGAGAGGAACCGGGCCTCATCAAGAACCA
CCTTTCCATCTTCGCCACATCTATACTCGGAACCATCGGAAGAGCCGGTT
TCGGGTGTTGTTCGGGATCGCCTGCCGTATCGTGGCCTTCGACGTGACGA
TCCTGGTGAAGTACGTTGACGCTTCGGGCCTTACGAGTGAGTACGGAATT
GTTCGAGGGAGTGCGAAGACCGGACAAGCCTTACCCGTAAGCCGGCTCTC
GGACGCACAGTTAATACTTCGCTATGATTCAATCATCTCACAATGTCTTC
GACGCATATAGGATTTTCCGGAATTGAGTTCCTGCATCTCTCGGGACGAA
CGGCAGGAGAACCCGGGGATACATTCCCGCACACTCGACAAACAAAACCT
ATCGGCCATCCAAATTGATGCAGGAGCCTGAACCCACACAAAACAACGTT
TTCTCAACCCCAACCCACCCCCTGTTGAAGGTGGATCCACAGGTGACAAC
GATTGAGTATTTATGGACCGGCCCATCGATGCTTTTCATTTAGGTCCAGC
AGGCATGCCATAAGAGATAGATGACGGCTTTGTCGATTGCCACGGTCGCG
GTAGACTCTCTCGCAAGTCTAGTTGCGGGGCGGTTGAGGCCGATGTGCTT
ATCGACGCCTAACATGGCTTCCGAGGTTGGTGCTTGAAGTGTTGAGTGGG
AGAGCAATTTAAAACCACATGTATATCGCGCTGCGTCGCATCCAAGAACC
ACCTTCTCCCCAGCCCTTTCCAGGGCGTCCGAGATCGTTCCTATTCATAC
ACACTTTCCTGCGAACCCCCCTTGTCCTTCGTACTACTGCTCCCCGCGGG
CTGCAGCGACTCCCGTTACCTCCCCTTGTCGGTCCTTCTCGTACGCCGAA
ACCCCATCCTCGCTAGGCCCGGGCTTGCAAAGCATTCCCTTGATCCTCTG
CGCCTCGAGCGTCATATCTCTCGTCTGGTCCGCTTCCCACAAGCAAGCGA
CCAAGGGAAAGTGCTGCATCCTCGGCCTAGGAGTTATGGCGTCATTGTTT
TACCTCCAAACGCGCTTCACAACAGGCATGCTGGGATGGGCCCACATTGA
CGAAGAAGGTGCGTCGGAACGCATGGGAGGCCGTTGGGGTGGACGCACGA
CCTAGATGAACGGCCACTTTTTTGCGCTTGGAAGGCAATCTGTTTGTGAT
TCGTTCCCCGCCCCCGCGTTGTGCGATGTAGATTATTTGAGGATCTTGCA
AAAACCTAAATTTTGTGAGCGCTCTCTTCGCGTCACGCACTGGGAATATG
AGAGCATGGTCCGGCTAGAACCCGCGTGCTCTGTCCCGGCTTTGTTGGGA
TGCAAGGTCAATGGCCAAACGCCTACGGCATGGACGACTATGAGTACACC
ACCCCCTCACTTCACGTGCGATATTCATTGCATTCATTACGAAGATTCCA
CCCCGACTTGACACACTGCTGTCTCTCTTCCTGTACAAGTTCGCGATAGC
TTGCGCGATAGCTTGCGCGATGGCATGCGCGACCTGTGGCTGTGGCCGCT
GGTGTTGAACCTCTTCTACCTCGGCGGACTCGTCTTTATCTGGGTCATCG
ATATTATTGCCTTTTGCAAGTACCGTCGTGGTGAACAGGATCTTCCTCGG
CACCACGAGCGATCCCTGCAACCACGAGAAGACCGTTTCCGGCATTGGCG
CAGCACCGCCACGCCTGCAAAGGCAACCACTCGACCCCCAACGGGGGTTC
ATGCGGCGGCTGCTGCTGCTGCTGCTGCTGCTCCTGGAACCAGCGGTGAA
CGGACGACGAGTAGACTTAGTGTTGGAGGCGATTTGGCGCTTCTTACCAC
CGTGGGTGGTCATGAGCAGCTTGGATCTTCCATTGTTTGGTCGGCGGCAC
CCGTTGGACAACACATTGAGGCCGCTCCCGTTTCAGCATCGGTATCCGTT
ACAAGGGCGGCCGTCTCCCCGCGACTGCCGGCGCAGTGACGCCAGTCGCC
GAAAGGGAACCTCGGAAACACCGCGTTTTATTACAAGTGCGATCGTTCTT
CTTTGCACTAAATGTTTCGTAGAGGAGCAGACTACGTTCCTGTAGCAGAA
AAAATGTAGTTTTCGTTGTTCAGCGAGTTGACGGAGGAGCATTCATCAGG
CTTGTTTGGGTATTTCGAAGGTCGAGCGTGTGACCATGTAACCCAATCTT
GGCTCAGATATTGGAATTCAGCAGAACAGAAACAGAAAACCACGCGTCCA
CCAAAAGCACGATCCTATAATCTGGCAAATGTACCCTTAGAAATAGCCTA
CTATCCTCGTTCGTGACGTAGGTTCGCCGTTCTTCCCGGGGCAGCAGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1344:1605..7802+

>mRNA_Ecto-sp13_S_contig1344.2742.1 ID=mRNA_Ecto-sp13_S_contig1344.2742.1|Name=mRNA_Ecto-sp13_S_contig1344.2742.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1128bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1344:1605..7802+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGGTGTTGGCGGTTCCCGCGGGTTCGAGAAGGTTTGCAAGGTGCAT
GGGGATCGCGATGAGGGTGCTGCTAGCGTGCTCTGTTTTCTTCCACCTGG
TGGCGGCCTGTCTGGCGGCGAGTGTCTATGTTCACCTGAGGATCCACCAT
CCACACCACGACGGTAGCGGCTTTCCTGCGATTCTACTGGGACCGACATT
CGTCCTCGCTTGGGGGGCAATCTTGATAGCTCTCGTGGAGATATCCCTCC
TGCGTATCTCCCATCCGGAATCGAGAGGAACCGGGCCTCATCAAGAACCA
CCTTTCCATCTTCGCCACATCTATACTCGGAACCATCGGAAGAGCCGGTT
TCGGGTGTTGTTCGGGATCGCCTGCCGTATCGTGGCCTTCGACGTGACGA
TCCTGGTGAAGTACGTTGACGCTTCGGGCCTTACGAGCCCGGGCTTGCAA
AGCATTCCCTTGATCCTCTGCGCCTCGAGCGTCATATCTCTCGTCTGGTC
CGCTTCCCACAAGCAAGCGACCAAGGGAAAGTGCTGCATCCTCGGCCTAG
GAGTTATGGCGTCATTGTTTTACCTCCAAACGCGCTTCACAACAGGCATG
CTGGGATGGGCCCACATTGACGAAGAAGTTCGCGATAGCTTGCGCGATAG
CTTGCGCGATGGCATGCGCGACCTGTGGCTGTGGCCGCTGGTGTTGAACC
TCTTCTACCTCGGCGGACTCGTCTTTATCTGGGTCATCGATATTATTGCC
TTTTGCAAGTACCGTCGTGGTGAACAGGATCTTCCTCGGCACCACGAGCG
ATCCCTGCAACCACGAGAAGACCGTTTCCGGCATTGGCGCAGCACCGCCA
CGCCTGCAAAGGCAACCACTCGACCCCCAACGGGGGTTCATGCGGCGGCT
GCTGCTGCTGCTGCTGCTGCTCCTGGAACCAGCGGTGAACGGACGACGAG
TAGACTTAGTGTTGGAGGCGATTTGGCGCTTCTTACCACCGTGGGTGGTC
ATGAGCAGCTTGGATCTTCCATTGTTTGGTCGGCGGCACCCGTTGGACAA
CACATTGAGGCCGCTCCCGTTTCAGCATCGGTATCCGTTACAAGGGCGGC
CGTCTCCCCGCGACTGCCGGCGCAGTGA
back to top