mRNA_Ecto-sp13_S_contig13410.2729.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: A0A7S1NPW1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NPW1_9EUGL) HSP 1 Score: 129 bits (325), Expect = 1.450e-34 Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 1
Query: 187 EKAPRPKRNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYR-DQWKEFPADWFEGLNVKRQVASPT 423
++ P PKRN GELVFPD+P+FRPNL+PK+VL+MGSFGGTYFR IKS VTGKTY DQWKEFPADWFEGLN+ ++ S T
Sbjct: 59 KRMPIPKRNANGELVFPDYPEFRPNLTPKEVLQMGSFGGTYFRSIKSGVTGKTYAADQWKEFPADWFEGLNINAKITSQT 138
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: UPI001E1DF070 (uncharacterized protein LOC123552860 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF070) HSP 1 Score: 122 bits (306), Expect = 1.600e-31 Identity = 53/76 (69.74%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 196 PRPKRNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLNVKRQVASPT 423
P PKRN KG+LVFPD P+ RPN++PK+VL+ GSFGGTYFRPIKSSVTGK+Y WKE P DW EGLN+ +QV+S T
Sbjct: 81 PLPKRNAKGQLVFPDHPELRPNMTPKEVLQAGSFGGTYFRPIKSSVTGKSYTQVWKELPKDWLEGLNIGKQVSSST 156
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: A0A7S4DHK3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHK3_HETAK) HSP 1 Score: 117 bits (293), Expect = 2.790e-31 Identity = 49/74 (66.22%), Postives = 63/74 (85.14%), Query Frame = 1
Query: 196 PRPKRNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLNVKRQVAS 417
P P RN+ GELVFPD+P F+PNL+PK+++++GSFGGTY+RPI+S VTG+ Y QWKEFP DWFEGL+V +QV S
Sbjct: 52 PVPTRNKFGELVFPDYPDFKPNLTPKEIMQLGSFGGTYWRPIQSGVTGEKYSGQWKEFPMDWFEGLDVGKQVTS 125
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: A0A8J5CNP2_CHIOP (Uncharacterized protein n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J5CNP2_CHIOP) HSP 1 Score: 120 bits (302), Expect = 5.040e-31 Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 1
Query: 193 APRPKRNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLNVKRQVAS 417
AP P RN G+LVF D P FRPNLSPKQV++MGSFGGTYFRPIKSSVTG++Y WKE P DW +GLNVK Q+AS
Sbjct: 74 APAPSRNHLGQLVFEDVPDFRPNLSPKQVVQMGSFGGTYFRPIKSSVTGESYNQVWKELPDDWLKGLNVKTQIAS 148
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: UPI001E1CD374 (uncharacterized protein LOC123508704 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CD374) HSP 1 Score: 120 bits (300), Expect = 5.840e-31 Identity = 56/82 (68.29%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 172 GASASEKAPRPKRNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLNVKRQVAS 417
G+S + AP P RN G+LVF P+F PNL+PKQVL+MGSFGGTYFRPIKS VTG++YRD WKE P+DW EGLN+K QVAS
Sbjct: 38 GSSFTITAPPPTRNALGQLVFEGAPEFCPNLTPKQVLQMGSFGGTYFRPIKSGVTGESYRDVWKELPSDWLEGLNIKTQVAS 119
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: A0A6P8ISI2_ACTTE (uncharacterized protein LOC116304540 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ISI2_ACTTE) HSP 1 Score: 119 bits (297), Expect = 2.230e-30 Identity = 48/73 (65.75%), Postives = 66/73 (90.41%), Query Frame = 1
Query: 205 KRNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLNVKRQVASPT 423
KR++ G+LVFPD+P+F+PNL+PK+VL+ GSFGGTY+RPIKSSVTG+ Y +WKEFP+DWF+GL++ +QV+S T
Sbjct: 67 KRDKHGKLVFPDYPEFKPNLTPKEVLQAGSFGGTYYRPIKSSVTGEKYSGEWKEFPSDWFDGLSINKQVSSST 139
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: W5NBZ2_LEPOC (Uncharacterized LOC102683593 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5NBZ2_LEPOC) HSP 1 Score: 115 bits (289), Expect = 3.250e-30 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 1
Query: 202 PKRNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLNVKRQVASPT 423
P++N KG+LVF DFP F PN++PK+VL+ GSFGGTYFRPI SS+T ++Y+D WKE P DW EGL++ +QVASPT
Sbjct: 51 PEKNNKGQLVFKDFPTFGPNMTPKEVLQAGSFGGTYFRPIYSSITKQSYKDVWKELPVDWLEGLDIPKQVASPT 124
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: A0A6J8E641_MYTCO (Uncharacterized protein n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8E641_MYTCO) HSP 1 Score: 119 bits (297), Expect = 4.170e-30 Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 1
Query: 202 PKRNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLNVKRQVAS 417
P RN+KGELVF D P+ +PN++PK+VL+ GSFGGTYFRPIKSSVTGK+Y +WKE P DW EGLN++RQVAS
Sbjct: 94 PTRNKKGELVFEDVPELQPNMTPKEVLQAGSFGGTYFRPIKSSVTGKSYSGEWKELPKDWLEGLNIQRQVAS 165
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: A0A1W0E686_9MICR (Uncharacterized protein n=1 Tax=Enterocytozoon hepatopenaei TaxID=646526 RepID=A0A1W0E686_9MICR) HSP 1 Score: 117 bits (292), Expect = 8.340e-30 Identity = 47/72 (65.28%), Postives = 64/72 (88.89%), Query Frame = 1
Query: 208 RNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLNVKRQVASPT 423
R++ G++VF D+P F+PNL+PK+VL++GSFGGTYFRPI+SS+T K+YRD WKEFP+DWFEGLN+ ++V S T
Sbjct: 51 RDKDGKIVFDDYPDFKPNLTPKEVLQLGSFGGTYFRPIESSITNKSYRDVWKEFPSDWFEGLNITKEVTSLT 122
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Match: A0A7M7T340_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7T340_STRPU) HSP 1 Score: 117 bits (294), Expect = 8.770e-30 Identity = 52/74 (70.27%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 196 PRPKRNQKGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLNVKRQVAS 417
P PKRN KGELVF D+P+ RPN+SPK+VL+ GSFGGTYFRPIKSSVTG+ Y WKE P +W EGL++ RQVAS
Sbjct: 81 PLPKRNAKGELVFSDYPEMRPNMSPKEVLQAGSFGGTYFRPIKSSVTGEKYSGVWKELPKNWLEGLDIPRQVAS 154 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13410.2729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13410.2729.1 >prot_Ecto-sp13_S_contig13410.2729.1 ID=prot_Ecto-sp13_S_contig13410.2729.1|Name=mRNA_Ecto-sp13_S_contig13410.2729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp VSKKPRTTSSSSSSSSKSAAGKAKAGEKGKAKSAKQPDADRKASSPTTSSback to top mRNA from alignment at Ecto-sp13_S_contig13410:4082..4731+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13410.2729.1 ID=mRNA_Ecto-sp13_S_contig13410.2729.1|Name=mRNA_Ecto-sp13_S_contig13410.2729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=650bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13410:4082..4731+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13410:4082..4731+ >mRNA_Ecto-sp13_S_contig13410.2729.1 ID=mRNA_Ecto-sp13_S_contig13410.2729.1|Name=mRNA_Ecto-sp13_S_contig13410.2729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=423bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13410:4082..4731+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |