mRNA_Ecto-sp13_S_contig1340.2719.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1340.2719.1
Unique NamemRNA_Ecto-sp13_S_contig1340.2719.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: A0A6H5L6U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U7_9PHAE)

HSP 1 Score: 962 bits (2488), Expect = 0.000e+0
Identity = 466/501 (93.01%), Postives = 474/501 (94.61%), Query Frame = 1
Query:   94 MVRFLVALLGVVAVVAAVFPEGHAAAAAADEEERGSNDQVKIGELYQGRVEPKEWIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLTTYCRLMAEKDGKKDCPFRDNIRVLEMRASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVFFSPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMPQSREEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPYSLDDDSGDGEETFVSWRRRKGLDPVTAGPRWSEMKGKLEASGVDVWWDPRPGERKAAPKARGADGGRQENARPERYDEGGGDVAAQ 1596
            MVRFLVALLGVVAVV AVFP+  A          GSNDQVKIGELYQGRVEPKEWIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCL TYCRLM  KDG KDCPFR+NIRVLEM ASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEV+FSPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHH QTTSWRSNKKV+GD GKDRQRLANQRLWNLMEMP S EEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPYSLDDDS DGEETFVSWRRRKGLDPV AGPRWSE+KGKLEASGVDVWWDPRPGERKAAPKARGADGGR++NARPE YD+G G VAAQ
Sbjct:    1 MVRFLVALLGVVAVVTAVFPDS-AXXXXXXXXXAGSNDQVKIGELYQGRVEPKEWIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLATYCRLMGVKDGAKDCPFRENIRVLEMHASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVYFSPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHEQTTSWRSNKKVDGDDGKDRQRLANQRLWNLMEMPLSSEEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPYSLDDDSRDGEETFVSWRRRKGLDPVAAGPRWSEIKGKLEASGVDVWWDPRPGERKAAPKARGADGGRKDNARPEGYDKGSGGVAAQ 500          
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: D7FQK5_ECTSI ([Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK5_ECTSI)

HSP 1 Score: 827 bits (2136), Expect = 4.700e-300
Identity = 399/422 (94.55%), Postives = 404/422 (95.73%), Query Frame = 1
Query:    1 ARHYFCVARATSTVVRTGEVNYILFDEHYGVMVRFLVALLGVVAVVAAVFPEGHAAAAAADEEERGSNDQVKIGELYQGRVEPKEWIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLTTYCRLMAEKDGKKDCPFRDNIRVLEMRASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVFFSPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMPQSREEGRREVQGDPWGLGDRRTLDEFIEFTGV 1266
            ARHYFCVARATST VR GEV YIL DEHY VMVRFLVALLGVVAVV  VFPEG AA AAADEE+ GSNDQVKIGELYQGRVEPKEWIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCL TYCRLM EKDGKKDCPFRDNIRVLEM ASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEV+FSPSQQPRNQQA  IHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMP+S +EG +EVQGDPWGLGDRRTLDEFIEFTG 
Sbjct:   12 ARHYFCVARATSTAVRAGEVRYILVDEHYAVMVRFLVALLGVVAVVT-VFPEGSAAGAAADEEQGGSNDQVKIGELYQGRVEPKEWIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLATYCRLMGEKDGKKDCPFRDNIRVLEMHASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVYFSPSQQPRNQQA--IHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMPRSSKEGSKEVQGDPWGLGDRRTLDEFIEFTGT 430          
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: A0A836CB83_9STRA (GlcNAc-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB83_9STRA)

HSP 1 Score: 401 bits (1030), Expect = 1.700e-131
Identity = 196/381 (51.44%), Postives = 257/381 (67.45%), Query Frame = 1
Query:  208 QVKIGELYQGRVEPKEWIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLTTYCRLMAEKDGKKDCPFRDNIRVLEMRASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVFFSPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDR---QRLANQRLWNLMEMP--QSREEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVP 1335
            Q+KIGE+Y   ++  +W+ + R    PQP+PP TDSWS  + TLW GIAS+RDP+CG+TL N+F+KA +PER+   VVQQ +E D  C+  YC L A KD   +CPF  N+RVL   A+EA GP W RHLQ YLL DEEFC+Q+DSHMD ++ W+  +M EWA  NNE+ VLSTYVQD   LGVNV   +E +HLCE+ +   +Q RN+ A+A+  MT+PKLTTTW AG SFSKCH+ R VPYDP L ++FDGEEFS  ARL+TNGYDVYTP + ++ HDY+  ++     W          G+DR   +++++ RLW L+EMP   S  EGR+ VQ  P+GLG  RTLD+ ++F  +DLR K H     D C   V +VP
Sbjct:    5 QLKIGEVYS--IKAGDWVAVHRDLDGPQPFPPPTDSWSTAEATLWVGIASYRDPRCGKTLHNMFTKAKHPERVHVAVVQQMVEGDADCMDDYCAL-AGKDANGECPFAKNVRVLRTDAAEAAGPTWGRHLQQYLLRDEEFCLQIDSHMDMIQDWEAGLMAEWAQINNEHAVLSTYVQDVEDLGVNVGGHFETSHLCEILWE--EQVRNEGAKALRLMTQPKLTTTWAAGLSFSKCHSMRAVPYDPYLPQVFDGEEFSYFARLFTNGYDVYTPTKTYIGHDYNGANNPNAHGWYVAT------GRDRAAEEKMSDMRLWTLLEMPGGDSTPEGRQAVQFGPFGLGTARTLDQLMDFAMIDLRTKTHKADPADMC-QDVHYVP 373          
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: A0A6H5KPV9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPV9_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 7.340e-106
Identity = 180/419 (42.96%), Postives = 241/419 (57.52%), Query Frame = 1
Query:  256 WIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLTTYCRLMAEKDGKKDCPFRDNIRVLEMRASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVFFSPS-QQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHA-QTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMPQSREEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPYSLDDDSGDGEETFVSWRRRK--------GLDPVTAGP-RWSEMKGKLEASGVDVWW 1479
            WI +     AP+P PP+T SW  +DT+++ G++SFRD +C +TL N FSKA YPER+T GVVQQN  +D  C+  YC++M        CP+ DNI+ L + A  A GPC+ RHLQSY+L DEEFCMQ DSHMD V+ WD  +M  W   NNEYG+L+TYV     L      K EV HLC++ F+ +   PR  QA+   ++  PKLT TW AG S +KCHA +  PYDP L ++FDGEEFS  ARLWT GYD YTP +  + HDY+      Q +SW +NK V G   KD   LA +R++ L  MP   +          +GLG +RTL+++ EF GV+L   E   + G RCG+ + +VP+       +       W RR+        G  PV +GP ++    G        V W
Sbjct:   53 WIALWDDDEAPRPPPPKTTSWKRSDTSIFVGVSSFRDKRCPQTLVNFFSKAKYPERITVGVVQQNDHEDVDCVVEYCKMMGGHAEGPLCPYFDNIKTLRVEARWAAGPCYGRHLQSYMLRDEEFCMQTDSHMDVVQDWDAKLMAMWGRVNNEYGILTTYVHKIEQLHEGYENKKEVPHLCQLGFTETGNHPRYVQAKLATKLPSPKLTNTWAAGLSLAKCHAWKASPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNKVKEGPQPSSWLNNKMVAG--AKD---LAYKRMFTLFGMPGKVDTEEIWESIGQYGLGTKRTLEQYQEFIGVNLTTLE---IMGSRCGT-LTYVPFEETWPPTENNLAGPYWERRRAGRGIHAPGYTPVLSGPSKYVRTGGSSRGGRPGVGW 462          
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: A0A4D9D890_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D890_9STRA)

HSP 1 Score: 318 bits (815), Expect = 2.520e-97
Identity = 173/421 (41.09%), Postives = 244/421 (57.96%), Query Frame = 1
Query:  187 EERGSNDQVKIGELYQGRVEPKEWIPITRSSTA--PQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLTTYCRLMAEKDG--------------KKDCPFRDNIRVLEMRASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVFFSPSQQP-RNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMPQSREEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPYSL-DDDSGDGEETFVSWRRR 1395
            E +  N   K      GR     W     +  A  PQPYPP+TDSW+  DT++   I+SFRD +C +TL+NLF+KA+ P+R+ AGVVQQN   D  CL  YC  + E+ G               ++CP  D +++L ++A +A+GP + R+L SYL+ DEEFCMQ+D+HMDF + WD  +++ W   NNEYGVL+TYV +   L VN++ ++EV  +C V ++P ++  RN+QA     + +PKLT+TW AG++FSKCHA+ + PYDP+L  +FDGEE+SK ARLWT GYD YTP R  + HDY+H    +  +  S K  E     +R R     L         RE          W LG +R+L++ I FTG D R  +   V  + CG  ++WVP+   DDD    E T  + RRR
Sbjct:   27 EAQNENSFGKAAVFMNGR-----WTQFDENDDAGVPQPYPPKTDSWTLNDTSIMVSISSFRDYRCPKTLYNLFTKAANPDRVYAGVVQQNNAGDVDCLNDYCEKIKEERGIGPDASAADPNLRITQNCPHADQVKMLRVQAEDAKGPTYGRYLGSYLVGDEEFCMQIDAHMDFEDHWDKQLLDMWGLANNEYGVLTTYVPNLDQLHVNLNGRFEVPQVCRVTYTPGEKMVRNEQATNCIWLRKPKLTSTWAAGFAFSKCHADLKTPYDPHLPSLFDGEEYSKYARLWTRGYDTYTPHRSVVYHDYTHGATEKDANAWSRKYRELKHSHERLRT----LLGYSGAVVGRETPAAAEMLGRWDLGKKRSLNQLIAFTGADTRETK---VDFNSCGK-LQWVPFDEGDDDDWYSEITSAARRRR 434          
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: A0A7S3YLX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLX0_HETAK)

HSP 1 Score: 310 bits (793), Expect = 3.480e-95
Identity = 160/381 (41.99%), Postives = 229/381 (60.10%), Query Frame = 1
Query:  256 WIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLED-DEGCLTTYCRLM----------AEKDGKKDCPFRDNIRVLEMRASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVL--GVNVSKKWEVAHLCEVFF-------SPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMPQSREEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPY 1338
            WIP+      P PYPP++DSW   +TT++ GIA+FRD +C +TLFN+F+KA  P+R+  G+VQQ  E  D  C+  YC LM          A++   + CP  + +R+  +    A+GP + RHLQSYLL DEEFCMQ DSHMD+++ WD  ++  W A +NEY VL+TYV     L  G  +  +++V H+C++ +       +    PRN++A+    +T PKLT  W AG+SF KCH E++ P DP L  IFDGEE+SK ARLWT GYD+YTP +  + HDY+ P      SW       G   KD  R A  RL+ L+EM               +GLGDRR+LD++I+F+G D+R++  +    +RCG+ ++WVP+
Sbjct:    8 WIPLIEEPRPPLPYPPKSDSWKQDNTTIFVGIAAFRDSRCPKTLFNMFTKAKNPDRVFVGLVQQWDETKDTDCIEKYCELMGAAVAGQDQAADRRRAQACPHFEQVRIHRVSHLLARGPTFGRHLQSYLLRDEEFCMQTDSHMDYIDHWDQEVLAAWGAAHNEYAVLATYVNRFEDLESGRALHPRFQVPHICQLEYVGGAYMGAKGMLPRNKRAKGAINLTRPKLTPFWAAGFSFLKCHGEKQTPNDPQLPGIFDGEEYSKGARLWTRGYDIYTPHKALIFHDYNKPKDYDAMSW-------GRPNKDFNR-AKLRLFTLLEMLGGENTTEAISALGRYGLGDRRSLDQYIKFSGNDIRHRRALE---NRCGT-LDWVPF 376          
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: A0A835ZER6_9STRA (GlcNAc-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER6_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.650e-92
Identity = 162/372 (43.55%), Postives = 217/372 (58.33%), Query Frame = 1
Query:  256 WIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQN-LEDDEGCLTTYCRLM------AEKDGKKDCPFRDNIRVLEMRASEAQGPCWARHLQSYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWE---VAHLCEVFFSPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTT-SWRSNKKVEGDGGKDRQRLANQRLWNLMEMPQSREEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPY 1338
            W  +    + P+P+PP ++S+   + T++ G+++FRD +C +TL+N FSKA  P RL  G+VQQN + +D  CL  YC LM      A K G K CP+++ I++  + A  A GPC+ RH+QSY+L DEEFCMQ DSHMD V  WD  M   W  T NEYGVL+TYV     +G     K     V HLC+V F+    PR  QA+       PKLTT+W AG+SF+KCHA R  PYDP+L  +FDGEEFS  ARLWT GYD YTP    + HDY+ P    +  SW SN  +   G K  +RL  + L  ++  PQ   EG   +    +GLG +R+  +F EF G +    E   +  +RC S + WVPY
Sbjct:   15 WNALVDDDSLPKPHPPHSESYKDPNATIFIGVSAFRDKRCPKTLYNYFSKAKNPHRLRVGLVQQNSISEDPDCLQGYCDLMKADEKFATKFGDK-CPYKEQIKITRVEAKLAAGPCYGRHMQSYMLRDEEFCMQTDSHMDVVPEWDEEMAAMWGRTENEYGVLTTYVHVKESIGTLEQAKDRNKLVPHLCQVSFTGGNNPRYVQAKLAKLNGRPKLTTSWAAGFSFAKCHAWRAAPYDPHLKMVFDGEEFSMAARLWTRGYDFYTPDFSLIGHDYNRPTDGPSPGSWVSNPGLAEAGKKAHKRL--RALLGILGEPQP--EGEDAI--GKYGLGTKRSFQQFQEFVGANTTTLE---ILNNRCNS-IAWVPY 375          
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: A0A7S3YPG9_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YPG9_9EUKA)

HSP 1 Score: 290 bits (741), Expect = 1.660e-87
Identity = 147/366 (40.16%), Postives = 234/366 (63.93%), Query Frame = 1
Query:  286 PQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDE--GCLTTYCRLMAEKDGKKDCPFRDNIRVLEMRASEAQGPCWARHLQSYLLADE-EFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKK---------WEVAHLCEVFFSPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMPQSREEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPYSLD 1347
            P+PYPP+ D     DT +   I++FRDP+CG+T+ N F +A +P+R+ AG+VQQNL D +   C+  YC LM +K+G + CP+ +++ ++ + A E++GP WAR + + ++    +FCMQVD+H+DF++ +D A+M+ WA T NEYGVLSTYV + +    ++SK          +E+  +C+         RN QA A + +  P L+ TW AG+SF+KCH ER VP DP L+ +FDGEEFS+M RLWT+GYDVYTP R  + HDY+H        W+  ++   +G       A +R ++L++      +G  +V   P+GLG +RT+D++IEF+G+D R  +++G+  ++CG  +++VP++ D
Sbjct:   76 PRPYPPKDDLHVRNDTKVHMLISAFRDPRCGQTIANAFLRARHPDRIYAGIVQQNLHDKDEFDCIAVYCELM-KKEGHETCPYLNHLEIVRVDAKESKGPIWARAIGAVMVRPHHDFCMQVDAHVDFMQHYDDALMKMWAMTENEYGVLSTYVGNVKQ---DLSKSGHVLIGHPHYEIPFICKTIVGGHGVVRNSQATAAYCLPRPHLSFTWAAGWSFAKCHFERVVPNDPYLEGMFDGEEFSRMLRLWTHGYDVYTPHRPVVFHDYTH-----FRPWQKGRESTWNGNPPGLSYALKRYFSLVDK-----QGAEKVDLGPYGLGKQRTIDQYIEFSGIDPRTSKYLGL--EKCGK-LKFVPFAED 424          
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: A0A8J2SM54_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM54_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.210e-86
Identity = 157/387 (40.57%), Postives = 213/387 (55.04%), Query Frame = 1
Query:  256 WIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLTTYC---RLMAEKDGKKDCPFRDNIRVLEMRASEAQGPCWARHLQSYLLADE-EFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGV-----NVSKKWEVAHLCEVFFSPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKDRQR---------LANQRLWNLMEMPQSREEGRREVQGDP--------WGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPY 1338
            W+ I      P+P PP   +  +  + ++  IASFRD  C +T+ N+F +A YP+R+   V+QQNL +D  CL  YC   R+         CP R  I +    + EA+GP WAR   + +L D  EFC++ DSHM F + WD   +++W    NEY VLSTYV DS  L       NV+  WEV HLC + +      RN QA+A   + +PKLTT W AG SFS+CHAER VPYDP    IF GEEFS+ AR +T+GYD+YTP +  + HDY H     T    ++ K  G GG    R          AN+R+W L+ MP           GDP        +GLG +R+LD+ I FTG++LRN+   G    RCG+ ++WVP+
Sbjct:   46 WLRIVDREDIPKPCPPVGSASDHDQSIVYAAIASFRDSICPDTITNMFLRAKYPDRIRVAVIQQNLPEDLDCLEKYCDDARIAQNLPADAPCPRRGQISIKRFSSEEAKGPTWARAQDTDMLPDSAEFCLRTDSHMTFAQDWDTLQIQQWYDAQNEYAVLSTYVADSTNLNDDGSMRNVNGVWEVPHLCSIQWENGH-VRNMQAKAARLLKKPKLTTLWAAGLSFSRCHAERTVPYDPYTPYIFWGEEFSRTARFFTHGYDIYTPPKTLIAHDYKH-----TQGDPTHFKWNGRGGPRLNRNQTIIKARDAANKRIWTLLGMPG----------GDPSMVSSLGKYGLGTKRSLDDLIAFTGINLRNRTVSGSGNSRCGN-IDWVPW 415          
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Match: F0Y7S9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7S9_AURAN)

HSP 1 Score: 285 bits (728), Expect = 2.030e-85
Identity = 159/390 (40.77%), Postives = 220/390 (56.41%), Query Frame = 1
Query:  241 VEPKE--WIPITRS----STAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLTTYCRLMAEKDGKKD---CPFRDNIRVLEMRASEAQGPCWARHLQSYLLADE-EFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKK-----WEVAHLCEVFFSPSQQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYSHPHHAQTTSWRSNKKVEGDGGKD---------RQRLANQRLWNLMEMPQSREEGRREVQGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPY 1338
            V PK+  W+ +  +    S+AP P PP      +  + ++  IA+FRD  C  TL  LF +A YP+R+   VVQQN  +D+ C   YC       G  D   CP+ D+I V    + EA+GP WAR   + +L D+ EFC++ DSHM F   WD   + +W    NEY VLSTYV D+  +  + S+K     WEV HLC + +      RN QA+A   + +PKLTT W AG SFS+CHAER VPYDP+   IF GEEFS+ AR +TNGYD+YTP R  + HDY H     T    S+ K  G GG           ++  AN+R+W L+ MP    +     +   +GLGD+R+LD+ + FTG++L N+  IG    RCG+ ++WVP+
Sbjct:   25 VGPKDGKWVKVVDAEDVDSSAPVPCPPAGAPGDHDASIVFVAIAAFRDSLCATTLEGLFGRAEYPDRVRVAVVQQNKPEDDDCYEAYCAKARASRGLGDDAPCPYGDHISVKRFSSDEAKGPTWARAQDADMLPDDAEFCLRTDSHMAFANDWDTKQIAQWYGARNEYAVLSTYVADANQINEDGSEKNINNVWEVPHLCSILWQDGH-VRNMQAKAARLLEKPKLTTLWAAGLSFSRCHAERAVPYDPHTPYIFWGEEFSRTARFFTNGYDIYTPPRTIVAHDYKH-----TQGDPSHFKWNGKGGPRLNQNKTIVAQRDAANRRIWTLLGMPGGDPDPAARRRLGAYGLGDKRSLDDLVAFTGINLYNRT-IGPN--RCGN-IDWVPW 404          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1340.2719.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6U7_9PHAE0.000e+093.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQK5_ECTSI4.700e-30094.55[Skp1-protein]-hydroxyproline N-acetylglucosaminyl... [more]
A0A836CB83_9STRA1.700e-13151.44GlcNAc-domain-containing protein n=1 Tax=Tribonema... [more]
A0A6H5KPV9_9PHAE7.340e-10642.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9D890_9STRA2.520e-9741.09Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3YLX0_HETAK3.480e-9541.99Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZER6_9STRA1.650e-9243.55GlcNAc-domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S3YPG9_9EUKA1.660e-8740.16Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A8J2SM54_9STRA1.210e-8640.57Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0Y7S9_AURAN2.030e-8540.77Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1340contigEcto-sp13_S_contig1340:5574..14275 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score828.2
Seed ortholog evalue2.3e-237
Seed eggNOG ortholog2880.D7FQK5
Model size1644
Hectar predicted targeting categorysignal anchor
Exons8
EggNOG free text desc.Glycosyltransferase (GlcNAc)
EggNOG OGs2CXJN@1,2RY14@2759
Cds size1644
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1340.2719.1prot_Ecto-sp13_S_contig1340.2719.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1340 5574..14275 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462716.2344825-CDS-Ecto-sp13_S_contig1340:5573..58671681462716.2344825-CDS-Ecto-sp13_S_contig1340:5573..5867Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1340 5574..5867 +
1681462716.2470412-CDS-Ecto-sp13_S_contig1340:6757..69671681462716.2470412-CDS-Ecto-sp13_S_contig1340:6757..6967Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1340 6758..6967 +
1681462716.2688704-CDS-Ecto-sp13_S_contig1340:8926..90221681462716.2688704-CDS-Ecto-sp13_S_contig1340:8926..9022Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1340 8927..9022 +
1681462716.2763815-CDS-Ecto-sp13_S_contig1340:9712..98221681462716.2763815-CDS-Ecto-sp13_S_contig1340:9712..9822Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1340 9713..9822 +
1681462716.2841349-CDS-Ecto-sp13_S_contig1340:10758..108911681462716.2841349-CDS-Ecto-sp13_S_contig1340:10758..10891Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1340 10759..10891 +
1681462716.2923274-CDS-Ecto-sp13_S_contig1340:11614..118421681462716.2923274-CDS-Ecto-sp13_S_contig1340:11614..11842Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1340 11615..11842 +
1681462716.3010476-CDS-Ecto-sp13_S_contig1340:12345..125371681462716.3010476-CDS-Ecto-sp13_S_contig1340:12345..12537Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1340 12346..12537 +
1681462716.3111012-CDS-Ecto-sp13_S_contig1340:13894..142751681462716.3111012-CDS-Ecto-sp13_S_contig1340:13894..14275Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1340 13895..14275 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1340.2719.1

>prot_Ecto-sp13_S_contig1340.2719.1 ID=prot_Ecto-sp13_S_contig1340.2719.1|Name=mRNA_Ecto-sp13_S_contig1340.2719.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=548bp
ARHYFCVARATSTVVRTGEVNYILFDEHYGVMVRFLVALLGVVAVVAAVF
PEGHAAAAAADEEERGSNDQVKIGELYQGRVEPKEWIPITRSSTAPQPYP
PETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQN
LEDDEGCLTTYCRLMAEKDGKKDCPFRDNIRVLEMRASEAQGPCWARHLQ
SYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRV
LGVNVSKKWEVAHLCEVFFSPSQQPRNQQARAIHEMTEPKLTTTWGAGYS
FSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDY
SHPHHAQTTSWRSNKKVEGDGGKDRQRLANQRLWNLMEMPQSREEGRREV
QGDPWGLGDRRTLDEFIEFTGVDLRNKEHIGVTGDRCGSGVEWVPYSLDD
DSGDGEETFVSWRRRKGLDPVTAGPRWSEMKGKLEASGVDVWWDPRPGER
KAAPKARGADGGRQENARPERYDEGGGDVAAQQARQPPGGQQGGPVAA
back to top

mRNA from alignment at Ecto-sp13_S_contig1340:5574..14275+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1340.2719.1 ID=mRNA_Ecto-sp13_S_contig1340.2719.1|Name=mRNA_Ecto-sp13_S_contig1340.2719.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8702bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1340:5574..14275+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCTCGCCACTACTTCTGTGTTGCTCGTGCTACTTCTACGGTAGTGAGGAC TGGAGAGGTGAACTATATTCTATTTGATGAACATTACGGGGTGATGGTTA GATTTCTGGTGGCATTGTTGGGGGTTGTGGCGGTGGTGGCTGCTGTTTTT CCAGAGGGTCATGCTGCTGCTGCTGCTGCTGACGAGGAAGAACGCGGATC CAATGACCAGGTCAAGATTGGAGAGCTGTATCAAGGGAGGGTCGAACCAA AGGAATGGATTCCCATCACGCGGAGCAGCACTGCCCCTCAGCCGGTGAGG ACTAAAGTGAAACTGGAATAAGTCACAGCAGACGCATACAACATGATCAG CTGTCTTGAAGAAGATAACAGGGAACACGAGGGAGGCAGGCTACTTGCTT CCTCACTCAAGCTGCTGTCGGTTCTCAATCTCCGTCCGTCTCGAGTGGAG CTCGGCAACATCGCACGTCACCAAAAGGGTTTGGAAGAGAGAGGAGAGCA GGGTTCCCGCGCTTCTACCTGAACGGCTGAACGCCGCAACTTGAGGCCTT TCCTTCAGGAGGTGTTTGTTGATGTTGTGGACTAAGTAGACTAAACCGCA GGAGGGCGCACGGTCGCGCTCATTCTGCTGTCGGCGGCTCCACGCTCTCC TCCCTGCAGACCGGCGTCTGAGCCAGTAGCTGCACCGAATCATCTTCCCT GAACCAGTGCCCCCAGAGCTGCTGCTGTTTACATGCTGATGAGATACCGA TGGGTCAAAGGCATCTATCACCACGCCGGACCCTACATGTATGAATGCTC CCGCTCTCACGAGCCCTGTTTTTCAAATACTCTATATCCCTCCGCAAATC GTAGTCACTGGTTATTCCAGTCTCGCTTTCGCTTTGTACTCGTACACCTC AAGAGGAATACGCCGGTGTCGCCGCTGTAGGACCTTGTGCAAGACCAATG ATCAGTTCCCTTGTGTGCCGGATTGAACAAGTTTGTGTCGTTTGTACCCT GCCCGGTGTACAGGGCAAACTGATGAGCAACTCGGCCGCCACCAATTGGG ACCTGGCGAAACTTCTGGAACTGAAGTATCGACTATCACAGCAGTCAAGC AGCAGTGCACTTTCAGACATGACGACATCCCACTCTCGCTTCGTCCGCCC CCTCCCCTGGTCGACGCAAAACAATAAACGTTAGTATCCCCCCGAAACGG ATTCATGGAGCTACACCGACACAACCCTGTGGACGGGAATAGCGTCCTTC CGAGACCCGCAGTGCGGTGAGACCCTGTTCAACCTCTTCAGCAAGGCCAG CTACCCGGAGCGCCTGACGGCCGGGGTGGTGCAGCAGAACCTGGAGGATG ACGAGGGATGCCTGACGACGTACTGCAGGCTCATGGCCGAAAAGGTGTGC GTTCTTATTTGTTGCGCGGTGGCTTTTTGCTTCTTCTGCGGTGCGTATGC TATACACATGTGCTTTTCCGAGCGTGGTGGTGGGTGGATGGATGGATGGA TGGATGGCGTGTGTGTGTATTGCTTATCGACTTGAAAATGGTACACAAAT AAAATTCGGTTTTGTGTGTAGGTCCACGGTTCGACAGCTATGTTCCCCCC CCCCCCCCAACTGCTCACGCCGTCGGGTGTTGTGTAGGTTTTTCTGAATA CCCCTACCGCTCAGGTCTCATCACGTTGGAGAGGGATGCTCGAAACTGCT TATTGCGTTGACTCTCCAGCGAGGAATGAATGATGTTTGGCTCTCCTGCA GGCAGAGAGACGGAAAAACAAATGAACGAAACTAGACATGAATGCGCGTT CGACGGAACAGAAAATTTGGAAAGCAGAAAGAAAAGTACACCTTCATAAC TGCACAGCAACCGAAGGCGGTCTCGCCTTACACCTCTGCTCTCTCTTCGT CTCTGTCTCTCTGTCTCCCTCTCGCTCTCTCTCTGTTAAATACCGTATGG AAGTAAGAGTTATCTGGTGTCATGCTTGCGCGACCACTTATTTTACCGCA TACCTAAGCGGGTTCGAATCACGTCTAGCCCCCGTGATTTTCTAACCAAA GAAAATATATGCTCTTGCGTCCCCAACATTGAAAAGAAACAAGTAAGAAT AAACCACATCCAAGCTTGATTCATCGGTGTATACAACCTGTTGTCCAGAG TGTTTTTCAAACATACTTGTATAATTTTCGGAAGATACACAGGAAAAGGC CCAGTTTCCAGTCGGTTTCAATCCACTTACTGAAAATACCTCAGCACATC CCTTTCGACTGAGGTCATATCTCGAACGGGTAGTCTTTCTGTGAGGTATG TTGACTTTCTAAAAAGGGTATAGGTCACGAGGTGCGGAGAAGAGCCGTCC AGCTTGGCATCCTCGCTATACGCGGGGGTGTGAAGGAGGCCCAGAGAGTC CGCACGAGTACATAGTAGACAAAGCTTGTAGACGTCTTGACACGTGCAAG GTGTACAGAGTGGTGGATGGATGTGTGGATGGCGTATGTGTCATTAGACG TCTTAACGTGTGCAAATTGCGCGGTTTTTCACTGCTGCTGTGTCGGTAGA CAACACCCGCTGATTTTCGTTGCGCACACTCGCGCACGTCCGGGGGGTAG CCGCGTGCCTCTCGAAACAACGAAAGCCTGGGCGGGGCACAGCCGCAGTC CGCGCTTTTGTTTGTAGGCCGTCCGCGGCTCGATTTTCGGTCGTTCTGGG TGGTGGTGTATGTCGGTCTTGAGAAGTGTGAAGGGTGGGGTGGGCTCGAG AGGAGAGCTCCACATGTGTGGTGTTGCTTCGGCTTTGGTGGTGGTGCTTC GCGTGGGTCAGGTCGAAGCGGCAAAGTCAGGGTTTCTCCTCTTTCATGCC TTCTGCACCCGCACGCCATAGCAGGTTTCTTTCATTCTTGCGGTCCCCTA CGCCTACTCTCAAAGCTCGGTTGCTCCACATCCAAGTGGGAGCGGAACGA GCCCGAAACGTCTCCGGAAATTCCTCGACGAGATGTTTCCAACAACCAGT TATTTTCTGCATTGGCACAATGTTCGTCGTGGAGCAATCGGACGTTGAAA ATTGTTGTGGGGGCTGTGCTATTTCTCCGCCTCTTGACGTGAAGTAGCTC GTGGGGTTCTGATACGTGCGGGATGTCCTCGTCTGTGTGCTCGCGTTCGG CTTGGAAAGCGGGAAGAGGATTTTATCGCCAATCTCCCATCGTGCCTAAA AAGTCCTCCCGCAGCTGACGCTCTTATGTCTTCCGTCTTTGGCCGGGTGA CGGCTTGTGCGTGTGCCTCACTCTTTGCGCATGTCCCGGCTCCACGTGTT CCGCCCTGTCTTCCGCGGTGTGGATTGGGCGGCAATGACACTCACTCTCC AAGGATGGAAAAAAAGACTGCCCTTTCCGTGACAACATCCGCGTCCTTGA GATGCGTGCGTCAGAGGCGCAGGGCCCCTGCTGGGCAAGACACTTACAGG TGGGTACACGGCGGTGTGTGAGCGTGTTTGGTGTTGGGGAAGGCACTTTC AGCAGTACATGTTGTACACGCGTGTTTTCGGGTTGCCAGCGTCTTAGTTG ACCATCGTGATATTGGTTGGCTTGTGGCTGTGCTCGTCCACAGCGCCCCT TGCAGGGCCGCTTAAATCTTGGAGTTTCTGGGAATGTTCAGGATCCAAAA CTATCGTACTATTGTGTAGTTTGCGGTGGCGATCCCTTCGACACACTTGG CCCGATATTTTCAGAGAATGGGCGTCTGGGGGCAGGTGACTCCGGAAGTC TTCTTACTGTTGAAATCGGTTACGGTCAGACGTGGACCGATTACCCCGCC TCTTGCTTGGCCATCTTCACGCAACAACAGCGTCATCAGTTGGTAGCGAC AGCAGCGGCAGCAGGTAGTTAACCATGGTATGCCGCAACACAGGAAACTC GGATGGGCTTCAGAGATCGACACGAACAAAAAATATGTAATCGCAACAAT TTTGTGCACCAATTATGAGCACCATCGAACACGCACTGGCTGCAAGCGAC ACAAATGTATCCGGCACGAATCATTGAGTGACGAAAAAAAGAAATCCGCT GTAACAAAGACATGAACGATAGCAACAACGGTATCCTCCCCTGCAAACCA AACCAACCCCTCGCCGCCACTGCTCGCTGCTGTCGTCAGTCGTACCTCCT GGCGGACGAGGAGTTCTGCATGCAGGTGGATAGCCACATGGACTTTGTTG AGGGGTGGGACATGGCCATGATGGAAGAGTGGGCGGCCACAAACAACGAG TGAGATATATAAATTCATCTTTCGTTTTTTGGGTATTCGAACAGCAAGAA AAAAGTCGTCGTCTTTTATGCCGTCGTTTGCAATTGCAACTGCTGCGGGC CTAAGTTTTTTTTGCTGACCTGGCTTCGAAATGGTTGTTGCATCACGTGG CTGATTGCAACCCTTAATCCTTGCTCCGCCACGTGTGGTATTCACACGGC CAGGCACGAGAAAGAACCGATGCAGTATCGCGCGTGTTAGTTGGATGTCC CATTCGTCTATCGTTGGGATTGAATCGCGCAACAGGACCGTACATTCGGA GGCACGCCCGCCGCTTTTCGCACCTCAAGGTCTTTGGACGCTTTCTCGCT TCACTTCACGAAAACTTCCCATTTTCGTCCCAAACAGAAGAACTAGATCG ATGGCACACCAACGCAGCTCGCCGCCAACCACACCCGGAGACCGCCAGTC AACGTAGAAGGACACCGATGATTGTGCTAAAAAGCGCTAGCCGCACAAGA GTTGTTCCCCGTCTCCTCCGCCATGTGGATGTATTGTACACGCTACCAAT ACAGCGCCCGCACTATATAAGAACAGATTTGATTCCCTCTTGTGGGCTAC AGATGGCCGCGATATAGGTTTTGGTGCAGGGGTTCTCAACTGGGCTCAGA CAAGAAGTGCTCAAGTGCTTCTGCGTCATACAGTGTTGAGCGTGGAGTTC GTGTAACTTCTCGAGTGCGAGCGCTTTATCTGTTTATCGCGTTTCACAAT CGCGTGACGCCCCTGCATCCCTGCATGTTCTGTCGCATCGTGTCGCGTCG TGCTTGATGAAAGCCCCGACTCGGCGGTGCGCCTGACTCCACCACCCATA ATAACGCCTCCTTCCCCTCGCGCGCACTTGTTTCCTTCTTCCTTTTTTTT CCGGTGGTGATCCTGGTCGTGCTGCTGCAAAAAAGGTACGGCGTTCTCAG CACGTACGTCCAGGACTCCAGGGTGCTCGGGGTCAACGTTAGCAAGAAGT GGGAGGTCGCCCACCTGTGCGAGGTTTTTTTCTCGCCCTCTCAGCAGCCC AGGAACCAGCAAGCACGAGTGAGATGAGAAAGAAACAAAGAAGGAGGAGG AAGGAGAGAGCGGGGGGGGTGGAAGTGGGGGTGGTACACTTGTACGCATG TAGTGTACCACCCGTTTGGTGTCGAGAAGAGTGATAGGTTATCCTACTTT AGGGGGAGTATAGCATCCCCCTGTGCTCCTCGTGGAGGAAATTGACGGCG TCTACGGTGATTCTGATACTTTGTAATGTACAATGGTACAACACTCAACC ACTCTGCGTTATCACTCCGTCTCCGTACGGCGAGAGCAAAAATAGGAAGA GAAATAATACAAGGCCCCTGGAATGTTTTCAATTGCCTGAAACATGTTGT GCCCGCGTGTGTGGGAAGGAGACACGTTCAAGGACGAGCCATGGACCACC GCCTTCGCAAGAGCTATGCTTGGTTCGTTGAGTCCAACCCCCGAATCGCA TATGGTAAATCCGGGTTATGATACTGGCCAAGCTGCTTGCTTCTCTGCCG CACCTACACACTCCACCGCCGCCCTTATCGCAGCATCGCTCGAAAGAACC CCCCAAGCCATGGATAATCCTTCCCTGTAGTGGCGCCCTGATGCTGCTGC TGTTGTTGCTGTTGCTGTTGCTGCTGCTGCTGTTGTTATTGCTGCTGCCG CTACTGCTGCTGCGGTTGCTTCTGCGTTTGCTTGTACTGCTGTTGCTGCT ATTGCTGTTGTGGTTACTGCTGCTGCTGCGGCCGTTGACAGGCCATCCAC GAGATGACGGAGCCGAAGCTGACGACCACGTGGGGGGCGGGGTACTCCTT CTCCAAGTGCCACGCCGAGCGGAGGGTCCCTTACGACCCGAACCTGGACC GAATCTTCGATGGAGAGGAGTTCTCGAAGATGGCCAGGCTCTGGACCAAC GGGTACGACGTCTACACCCCTCGCAGAGGTCACCTCGTGCACGACTACAG CCACCCCCACCACGCACAGGTATACGATGCATCGCGGAGCCTCGTAGATG GTTATGTTTGTTGGTAATCCGTGCCGGTGTGATAATATACTCACCTGTTG GTTTTCCTCCTAAAGCTTGCAAGTTCCATGAGAAAGCTCGGCAAGGCCTC AACGCACGGGTAAGGGGAACACACTCTACGTCGATGTCTGTGTTTCAGCC CCCCCTTCTTTTTTCATTTCCGACCGCAACCACGGAACTGTTGTTCATCA GGGAGGATGGCGATAACCACTTTTGATTCGTTTCGGCATGATCGCATGTG CAGTGCTTAGTAGAAGTACCTGTTGGCTCTTCTTGTTCCGGCACCGGAGT CGAATATTTTGCACAATTTCCGCGAGAACACACCACTTCCGCTGGGTCAC GTCGGGCTCTAGTAGCGTGAGCCAGCAGCAAGCTTCAGCACGAGTAGAGG CAGCGAACTTGCCTTTACCTCCCCACCTTCCCCCGGCCTCTCTCTCTTTT TTTTTTTGCGGCGCAACTTCAGACGACTTCCTGGAGAAGCAACAAGAAGG TGGAGGGGGACGGCGGAAAGGACCGACAGAGGTTGGCCAACCAGCGCCTG TGGAACCTGATGGAGATGCCGCAATCGCGCGAGGAGGGTAGGAGGGAGGT TCAGGGCGACCCCTGGGGGCTAGGCGATCGGCGGACGCTGGACGAGTTCA TCGAGTTCACGGGGGTGAGGCTGGCTTTTTCTTAACGTTTTTGTAGGACA AGTGGTTGAAAAGCAGGTCCCAGCGACACTTTTTGGGGCGGGGGGGGGGG GTGTACTCTCATCTTTTGCATGCCTGCCTTAGCGGTTGGGCCATTGACCA CGTGTCCTCGAGAGGACGGAGCGTTATTCCCACAGGACCGATCACCGATG GTCAATCATTCCTTCCGACTTTGACAAAGATGGGTCAAAAATGTCTTCCC TAATCAAAGTATCCTACCGATATCACTTCCCGTCTTTTCAACCCACTTCC GATGCCCCAGTACAGCTGACATCTTCTGGCTATTCCGTGCCTCAAACATC TCCCGGCACCTTCCCTCTACTTTTCCCAGCTCAGTCATGTATACTTCCTT CTCCTTCTTGTACAACCGACATTCCGCGACTACATGGGCACGGTTTTCGC ACTCGGAGCCGCAATCACATGTTAAACTTGTCGGGAGAGGGGGGGTTATG CAATAGACGTGTTAGTCATGTGGCCGTTCGCCTCCCGAGGAACAGCAGTA TCTGTTTGAGTCCCTTGTTTTGTTCCTGTTTGAGAAATGCCGCCGACTAA CAGTACTCTCGAAGCCACTCGGGAATCATATCGCGGGAAAAAGGTTCCCC CGCATATGAAAAAATCACGAGACGATGAACTCGAACCATGTGCGGCGACG GTGGTCGGAGGACAGACCTTTGCCACCCCTCAGCTCAGGCTCGACGTCAC GCTACATACTTAGTGACACGCGGTGGGGTGTGGAGGCCTACTATTGCCTT GGGGGCGTGTGCGCGTGGTGTGTTTCTGTTTTTTTCTTTTGAAAACTCAA CAATTTGGTCTCTTCCACAGGTATCGAGGCATGGCACGAAGATCATGGAC AATGATTCTCCACCAATTCCAAACAACGATACGATAAACCGTGCGACTAA ATAGTAGCCCCCGCTTTCGTTGAAGGAAAGCCGCCGCCGAACTTTGAACA CGTTACATCTACTAGGCCGATTGTGTGAATGAGGCATCGATGTTGTTGCA CACCTCTGTCGCTTTGGTATGCCGTCGCTGGCGCACCCGCGAATCATATA CTACGTCTCGGCATAAGTGTGTTTGTAGATGGGCAGCACAATCGAGGCGG ATTGCCAGATTGAACCACATCTCTTCTTTCCGGAAAAATAAATACACTTG ATGCTGCATCCCCTCAAGTCGAGCTTTTTACACAACCGCGTGTTCTCCCC ACATGCTGTGCTGCAGAATGGGCGAACAACGTTGTGCAACCGCCTCATCC CCCCCCCTCCTTCTCGCACCCACCCCCAATCAAAATCCCGCACACGATCA ACCGCCTCGTAACCTACTAAGGTCGACCTGCGTAACAAGGAGCACATCGG CGTGACCGGGGACCGCTGTGGAAGCGGGGTCGAATGGGTGCCGTACTCCC TCGACGACGACAGCGGGGACGGCGAGGAGACCTTCGTGTCGTGGAGAAGG CGGAAGGGGCTCGACCCGGTAACCGCGGGGCCACGCTGGTCGGAGATGAA GGGCAAGCTCGAGGCCTCGGGCGTGGACGTCTGGTGGGACCCGCGGCCGG GCGAGCGGAAGGCCGCGCCGAAGGCGAGGGGGGCGGATGGTGGGCGTCAA GAGAACGCCAGGCCTGAACGATACGATGAGGGGGGTGGCGACGTTGCGGC GCAGCAGGCGCGGCAGCCGCCGGGGGGGCAGCAAGGGGGCCCGGTGGCGG CG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1340:5574..14275+

>mRNA_Ecto-sp13_S_contig1340.2719.1 ID=mRNA_Ecto-sp13_S_contig1340.2719.1|Name=mRNA_Ecto-sp13_S_contig1340.2719.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1644bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1340:5574..14275+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCTCGCCACTACTTCTGTGTTGCTCGTGCTACTTCTACGGTAGTGAGGAC
TGGAGAGGTGAACTATATTCTATTTGATGAACATTACGGGGTGATGGTTA
GATTTCTGGTGGCATTGTTGGGGGTTGTGGCGGTGGTGGCTGCTGTTTTT
CCAGAGGGTCATGCTGCTGCTGCTGCTGCTGACGAGGAAGAACGCGGATC
CAATGACCAGGTCAAGATTGGAGAGCTGTATCAAGGGAGGGTCGAACCAA
AGGAATGGATTCCCATCACGCGGAGCAGCACTGCCCCTCAGCCGTATCCC
CCCGAAACGGATTCATGGAGCTACACCGACACAACCCTGTGGACGGGAAT
AGCGTCCTTCCGAGACCCGCAGTGCGGTGAGACCCTGTTCAACCTCTTCA
GCAAGGCCAGCTACCCGGAGCGCCTGACGGCCGGGGTGGTGCAGCAGAAC
CTGGAGGATGACGAGGGATGCCTGACGACGTACTGCAGGCTCATGGCCGA
AAAGGATGGAAAAAAAGACTGCCCTTTCCGTGACAACATCCGCGTCCTTG
AGATGCGTGCGTCAGAGGCGCAGGGCCCCTGCTGGGCAAGACACTTACAG
TCGTACCTCCTGGCGGACGAGGAGTTCTGCATGCAGGTGGATAGCCACAT
GGACTTTGTTGAGGGGTGGGACATGGCCATGATGGAAGAGTGGGCGGCCA
CAAACAACGAGTACGGCGTTCTCAGCACGTACGTCCAGGACTCCAGGGTG
CTCGGGGTCAACGTTAGCAAGAAGTGGGAGGTCGCCCACCTGTGCGAGGT
TTTTTTCTCGCCCTCTCAGCAGCCCAGGAACCAGCAAGCACGAGCCATCC
ACGAGATGACGGAGCCGAAGCTGACGACCACGTGGGGGGCGGGGTACTCC
TTCTCCAAGTGCCACGCCGAGCGGAGGGTCCCTTACGACCCGAACCTGGA
CCGAATCTTCGATGGAGAGGAGTTCTCGAAGATGGCCAGGCTCTGGACCA
ACGGGTACGACGTCTACACCCCTCGCAGAGGTCACCTCGTGCACGACTAC
AGCCACCCCCACCACGCACAGACGACTTCCTGGAGAAGCAACAAGAAGGT
GGAGGGGGACGGCGGAAAGGACCGACAGAGGTTGGCCAACCAGCGCCTGT
GGAACCTGATGGAGATGCCGCAATCGCGCGAGGAGGGTAGGAGGGAGGTT
CAGGGCGACCCCTGGGGGCTAGGCGATCGGCGGACGCTGGACGAGTTCAT
CGAGTTCACGGGGGTCGACCTGCGTAACAAGGAGCACATCGGCGTGACCG
GGGACCGCTGTGGAAGCGGGGTCGAATGGGTGCCGTACTCCCTCGACGAC
GACAGCGGGGACGGCGAGGAGACCTTCGTGTCGTGGAGAAGGCGGAAGGG
GCTCGACCCGGTAACCGCGGGGCCACGCTGGTCGGAGATGAAGGGCAAGC
TCGAGGCCTCGGGCGTGGACGTCTGGTGGGACCCGCGGCCGGGCGAGCGG
AAGGCCGCGCCGAAGGCGAGGGGGGCGGATGGTGGGCGTCAAGAGAACGC
CAGGCCTGAACGATACGATGAGGGGGGTGGCGACGTTGCGGCGCAGCAGG
CGCGGCAGCCGCCGGGGGGGCAGCAAGGGGGCCCGGTGGCGGCG
back to top