mRNA_Ecto-sp13_S_contig13373.2694.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13373.2694.1
Unique NamemRNA_Ecto-sp13_S_contig13373.2694.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: A0A6H5JUJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ5_9PHAE)

HSP 1 Score: 532 bits (1371), Expect = 7.840e-191
Identity = 274/276 (99.28%), Postives = 276/276 (100.00%), Query Frame = 1 
Query:    1 MERERDRTAEDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTEQT 828
            MERER+RTAEDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPD+LRNNTFTNVLKDDVSVKRWLTSLLFNLTEQT
Sbjct:    1 MERERERTAEDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDSLRNNTFTNVLKDDVSVKRWLTSLLFNLTEQT 276
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: D7FW54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW54_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 1.420e-188
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 1 
Query:    1 MERERDRTAEDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTE 822
            MERER+RTAEDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTE
Sbjct:   58 MERERERTAEDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTE 331
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: A0A836CJ98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ98_9STRA)

HSP 1 Score: 460 bits (1183), Expect = 7.190e-162
Identity = 233/261 (89.27%), Postives = 250/261 (95.79%), Query Frame = 1 
Query:   40 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTE 822
            LV QLTNP+QREGALLELSKKREAF+DLAPILWHS+GTISALLQE+VAIYP+LSPPTLTPHASNRVCNALALLQCVASHPETRA+FL AHIPLYLYPFLNTVSK+RPFEYLRLTSLGVIGALVKMDD++VI FLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YIC TAERFYAVSTVL NMVAVLVE+PSVRLLKH+VRCYLRLSDNLRAREALRQCLPDALR+ TF + LKDDVSVKRWL+ LL+N++E
Sbjct:   30 LVGQLTNPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRAVFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDSDVITFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDELGLNYICATAERFYAVSTVLSNMVAVLVEAPSVRLLKHIVRCYLRLSDNLRAREALRQCLPDALRDATFASALKDDVSVKRWLSQLLYNISE 290
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: A0A7S2V242_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V242_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 1.700e-157
Identity = 228/261 (87.36%), Postives = 245/261 (93.87%), Query Frame = 1 
Query:   40 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTE 822
            LV+QLT+PDQRE ALLELSKKREAF DLAPILWHS+GTISALLQE+VAIYPLLSPPTL+  ASNRVCNALALLQCVASH ETRALFL AH+PLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDD++VI+FLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YIC TAERFYAVSTVL NMVAVL E+PSVRLLKH+VRCYLRLSDNLRAREALRQCLP+ LR++TFT VLKDDV+V+RWL  LLFN+ E
Sbjct:   25 LVVQLTDPDQRETALLELSKKREAFADLAPILWHSFGTISALLQEIVAIYPLLSPPTLSAQASNRVCNALALLQCVASHQETRALFLNAHVPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVIHFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVAVLAEAPSVRLLKHIVRCYLRLSDNLRAREALRQCLPEGLRDSTFTGVLKDDVTVRRWLAQLLFNINE 285
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: A0A7S2S6Y0_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2S6Y0_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 1.110e-156
Identity = 227/263 (86.31%), Postives = 245/263 (93.16%), Query Frame = 1 
Query:   40 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTEQT 828
            LVLQLTNP+QRE ALLELSKKREAF+DLAPILWHS+GTISALLQE+++IYP+LSPP L   ASNRVCNALALLQCVASHPETR+LFL AHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDD+EVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YIC TAERFYAVSTVL NMVAVLVE PSVRLLKH+VRCYLRLSDNLRAREALRQCLPD+LR+ TF   L+DDV+VKRWL+ LL N++E +
Sbjct:   15 LVLQLTNPEQRESALLELSKKREAFSDLAPILWHSFGTISALLQEIMSIYPMLSPPNLPHGASNRVCNALALLQCVASHPETRSLFLSAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVAVLVEQPSVRLLKHIVRCYLRLSDNLRAREALRQCLPDSLRDATFNVALRDDVTVKRWLSQLLINISENS 277
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: R1C1A7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C1A7_EMIHU)

HSP 1 Score: 437 bits (1123), Expect = 7.660e-153
Identity = 221/263 (84.03%), Postives = 238/263 (90.49%), Query Frame = 1 
Query:   40 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTEQT 828
            LVL+LTNP+QRE ALLELSK+RE F DLAPILWHS+GTISALLQE+VAIYPLLSPP+LT  ASNRVCNALALLQCVASHPETR LFL AHIPL+LYPFLNT+SK RPFEYLRLTSLGVIGALVK+DD +VINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YIC TAERFYAVSTVLGN+V  LV+ PS RLLKH+VRCYLRLSDN RAREALRQCLPD LR+ TF+  LKDDV+ KRWLT LLFN+TE T
Sbjct:   23 LVLELTNPEQREAALLELSKRRETFIDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTISKTRPFEYLRLTSLGVIGALVKVDDPDVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVDQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDVLRDATFSACLKDDVTTKRWLTQLLFNITEST 285
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: A0A7S3AUU1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AUU1_9EUKA)

HSP 1 Score: 436 bits (1121), Expect = 1.850e-152
Identity = 221/261 (84.67%), Postives = 236/261 (90.42%), Query Frame = 1 
Query:   40 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTE 822
            LVL+LTNPDQRE ALLELSK+RE F DLAPILWHS+GT+SALLQE+VAIYPLL+PP+LT  ASNRVCNALALLQCVASHPETR LFL AHIPL+LYPFLNTVSK RPFEYLRLTSLGVIGALVK+DDA+VINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YIC TAERFYAVSTVLGN+V  LVE PS RLLKH+VRCYLRLSDN RAREALRQCLPDALR+ TF   LKDDV  KRWLT LLFN+ +
Sbjct:   29 LVLELTNPDQRESALLELSKRRETFADLAPILWHSFGTVSALLQEIVAIYPLLAPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVEQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDALRDATFQGCLKDDVITKRWLTQLLFNIND 289
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: F0Y9A1_AURAN (Uncharacterized protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0Y9A1_AURAN)

HSP 1 Score: 436 bits (1121), Expect = 1.980e-152
Identity = 218/265 (82.26%), Postives = 242/265 (91.32%), Query Frame = 1 
Query:   40 LVLQLTNPDQ---REGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTEQ 825
            LVLQLT PD    RE ALLELSKKRE FTDLAPILWHS+GT+  LLQE+V+IYP+LSPP LT HASNRVCNALALLQCVASHPETR LFL AH+PLYLYPFLNTVSKNRPFEYLRLTSLGV+GALVKMDD++VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLD+ GL Y+C TAERFYAVSTVL NMV  LVE PS+RLLKH+VRCYLRLSDNLRAREALRQCLP++LR++TF   +KDD++VKRWL+SLL+N++EQ
Sbjct:   12 LVLQLTVPDSPEHRESALLELSKKRETFTDLAPILWHSFGTMGTLLQEIVSIYPMLSPPNLTAHASNRVCNALALLQCVASHPETRGLFLNAHVPLYLYPFLNTVSKNRPFEYLRLTSLGVVGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLNYVCATAERFYAVSTVLANMVLTLVEQPSIRLLKHIVRCYLRLSDNLRAREALRQCLPESLRDHTFAGHIKDDLTVKRWLSSLLYNISEQ 276
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: A0A7S0DZ44_9EUKA (Hypothetical protein n=3 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S0DZ44_9EUKA)

HSP 1 Score: 435 bits (1118), Expect = 8.110e-152
Identity = 220/261 (84.29%), Postives = 237/261 (90.80%), Query Frame = 1 
Query:   40 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTE 822
            LV +LTNP+QRE ALLELSK+RE F DLAPILWHS+GTISALLQE+VAIYPLLSPP+LT  ASNRVCNALALLQCVASHPETR LFL AHIPL+LYPFLNTVSK RPFEYLRLTSLGVIGALVK+DDA+VINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YIC TAERFYAVSTVLGN+V  LVE PS RLLKH+VRCYLRLSDN RAREALRQCLP+ LR+ TF+  LKDDV+ KRWLT LLFN++E
Sbjct:   40 LVAELTNPEQRESALLELSKRRETFVDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGTLVEQPSARLLKHIVRCYLRLSDNPRAREALRQCLPEPLRDATFSGCLKDDVTTKRWLTQLLFNISE 300
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BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Match: A0A0M0K0H5_9EUKA (Cell differentiation protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0H5_9EUKA)

HSP 1 Score: 432 bits (1112), Expect = 4.330e-151
Identity = 220/261 (84.29%), Postives = 236/261 (90.42%), Query Frame = 1 
Query:   40 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTE 822
            LVL+LTNPDQRE ALLELSK+RE F DLAPILWHS+GT+SALLQE+VAIYPLLSPP LT  ASNRVCNALALLQCVASHP+TR LFL AHIPL+LYPFLNTVSK RPFEYLRLTSLGVIGALVK+DDA+VINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLDE GL YIC TAERFYAVSTVL N+V  LVE PS RLLKH+VRC+LRLSDN RAREALRQCLPDALR+ TF+  LKDDV+ KRW T LLFN+TE
Sbjct:   27 LVLELTNPDQRETALLELSKRRETFPDLAPILWHSFGTVSALLQEIVAIYPLLSPPALTAQASNRVCNALALLQCVASHPDTRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLANLVGALVEQPSGRLLKHIVRCFLRLSDNARAREALRQCLPDALRDATFSACLKDDVTTKRWHTQLLFNITE 287
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13373.2694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUJ5_9PHAE7.840e-19199.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW54_ECTSI1.420e-18899.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJ98_9STRA7.190e-16289.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V242_9STRA1.700e-15787.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2S6Y0_9STRA1.110e-15686.31Hypothetical protein n=2 Tax=Dictyochophyceae TaxI... [more]
R1C1A7_EMIHU7.660e-15384.03Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S3AUU1_9EUKA1.850e-15284.67Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
F0Y9A1_AURAN1.980e-15282.26Uncharacterized protein n=3 Tax=Pelagomonadales Ta... [more]
A0A7S0DZ44_9EUKA8.110e-15284.29Hypothetical protein n=3 Tax=Prymnesiophyceae TaxI... [more]
A0A0M0K0H5_9EUKA4.330e-15184.29Cell differentiation protein n=1 Tax=Chrysochromul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13373contigEcto-sp13_S_contig13373:1983..2813 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score529.6
Seed ortholog evalue8.5e-148
Seed eggNOG ortholog2880.D7FW54
Preferred nameRQCD1
Model size831
KEGG koko:K12606,ko:K13754
KEGG TC2.A.19.4.4
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000288,GO:0000289,GO:0000932,GO:0000956,GO:0001932,GO:0001934,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005102,GO:0005154,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006357,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007044,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007166,GO:0007276,GO:0007283,GO:0007346,GO:0007548,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010948,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019439,GO:0019899,GO:0019900,GO:0019904,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030014,GO:0030015,GO:0030330,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031570,GO:0031571,GO:0031581,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033135,GO:0033138,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033554,GO:0034097,GO:0034243,GO:0034248,GO:0034249,GO:0034329,GO:0034330,GO:0034641,GO:0034655,GO:0035556,GO:0035770,GO:0036464,GO:0042058,GO:0042221,GO:0042325,GO:0042327,GO:0042770,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045742,GO:0045786,GO:0045787,GO:0045893,GO:0045930,GO:0045935,GO:0045937,GO:0045944,GO:0046483,GO:0046700,GO:0046983,GO:0048232,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0065009,GO:0070851,GO:0070887,GO:0071156,GO:0071158,GO:0071310,GO:0071345,GO:0071704,GO:0071840,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0090068,GO:0090304,GO:0097159,GO:1901184,GO:1901186,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903508,GO:1990904,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000325,GO:2000327,GO:2001141
Exons1
EggNOG free text desc.positive regulation of nuclear receptor transcription coactivator activity
EggNOG OGsCOG5209@1,KOG3036@2759
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-01_003420.1
Cds size831
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462714.3507884-CDS-Ecto-sp13_S_contig13373:1982..28131681462714.3507884-CDS-Ecto-sp13_S_contig13373:1982..2813Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13373 1983..2813 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13373.2694.1prot_Ecto-sp13_S_contig13373.2694.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13373 1983..2813 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13373.2694.1

>prot_Ecto-sp13_S_contig13373.2694.1 ID=prot_Ecto-sp13_S_contig13373.2694.1|Name=mRNA_Ecto-sp13_S_contig13373.2694.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp
MERERDRTAEDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYG
TISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFL
KAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQT
EIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVST
VLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNT
FTNVLKDDVSVKRWLTSLLFNLTEQT*
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mRNA from alignment at Ecto-sp13_S_contig13373:1983..2813+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13373.2694.1 ID=mRNA_Ecto-sp13_S_contig13373.2694.1|Name=mRNA_Ecto-sp13_S_contig13373.2694.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=831bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13373:1983..2813+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGCGAGAACGAGACCGTACAGCAGAAGACACACAACTTGTTCTTCA
ACTCACCAATCCCGATCAACGAGAGGGTGCCTTGCTGGAGCTGAGCAAGA
AACGCGAGGCCTTCACGGATCTCGCTCCCATTTTATGGCATTCGTATGGG
ACAATTTCCGCTCTCCTGCAGGAAATGGTGGCTATCTACCCACTTCTTTC
ACCCCCCACGCTAACTCCTCACGCAAGCAATCGGGTATGCAACGCCCTCG
CCTTGCTGCAGTGCGTGGCGTCCCATCCCGAGACGAGGGCGTTGTTCTTG
AAAGCCCATATTCCCCTTTACCTCTACCCTTTTCTCAACACTGTGAGCAA
GAACCGCCCGTTCGAGTACCTTCGGCTGACAAGCTTGGGAGTTATTGGAG
CGCTGGTGAAGATGGATGATGCGGAAGTCATCAATTTTTTGCTGCAGACC
GAGATAATTCCGTTGTGCTTGCGAATAATGGAGACGGGGAGCGAGCTATC
CAAGACTGTGGCTACGTTCATCGTCCAAAAAATTCTGCTGGATGAGCACG
GGCTCGAGTACATTTGCCAAACGGCTGAGCGGTTTTACGCTGTCAGCACG
GTGCTTGGTAACATGGTGGCCGTTCTCGTGGAAAGCCCGTCGGTGCGTTT
GCTCAAGCATGTCGTGCGCTGCTATCTGCGGCTGTCGGACAACTTACGAG
CGCGCGAAGCGCTCCGTCAATGCCTCCCAGACGCCTTGAGGAATAACACC
TTTACCAATGTGCTCAAGGACGATGTTTCAGTCAAACGTTGGCTGACATC
GTTACTCTTCAACTTGACGGAGCAGACTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13373:1983..2813+

>mRNA_Ecto-sp13_S_contig13373.2694.1 ID=mRNA_Ecto-sp13_S_contig13373.2694.1|Name=mRNA_Ecto-sp13_S_contig13373.2694.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=831bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13373:1983..2813+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGCGAGAACGAGACCGTACAGCAGAAGACACACAACTTGTTCTTCA
ACTCACCAATCCCGATCAACGAGAGGGTGCCTTGCTGGAGCTGAGCAAGA
AACGCGAGGCCTTCACGGATCTCGCTCCCATTTTATGGCATTCGTATGGG
ACAATTTCCGCTCTCCTGCAGGAAATGGTGGCTATCTACCCACTTCTTTC
ACCCCCCACGCTAACTCCTCACGCAAGCAATCGGGTATGCAACGCCCTCG
CCTTGCTGCAGTGCGTGGCGTCCCATCCCGAGACGAGGGCGTTGTTCTTG
AAAGCCCATATTCCCCTTTACCTCTACCCTTTTCTCAACACTGTGAGCAA
GAACCGCCCGTTCGAGTACCTTCGGCTGACAAGCTTGGGAGTTATTGGAG
CGCTGGTGAAGATGGATGATGCGGAAGTCATCAATTTTTTGCTGCAGACC
GAGATAATTCCGTTGTGCTTGCGAATAATGGAGACGGGGAGCGAGCTATC
CAAGACTGTGGCTACGTTCATCGTCCAAAAAATTCTGCTGGATGAGCACG
GGCTCGAGTACATTTGCCAAACGGCTGAGCGGTTTTACGCTGTCAGCACG
GTGCTTGGTAACATGGTGGCCGTTCTCGTGGAAAGCCCGTCGGTGCGTTT
GCTCAAGCATGTCGTGCGCTGCTATCTGCGGCTGTCGGACAACTTACGAG
CGCGCGAAGCGCTCCGTCAATGCCTCCCAGACGCCTTGAGGAATAACACC
TTTACCAATGTGCTCAAGGACGATGTTTCAGTCAAACGTTGGCTGACATC
GTTACTCTTCAACTTGACGGAGCAGACTTGA
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