prot_Ecto-sp13_S_contig13370.2691.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13370.2691.1
Unique Nameprot_Ecto-sp13_S_contig13370.2691.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.940e-32
Identity = 67/115 (58.26%), Postives = 84/115 (73.04%), Query Frame = 0 
Query:   19 DLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAKNLSGSAVRACNSANAKLVANGQAPNAEIACYAELA 133
            DLPW+SR LA++ VDP TG Y+LV F LKTLEKV+Y EE GGG +   E+ A L R+  +  EQFN + +N M+V LA K+LS +AVR CN ANAKLV +GQ P+  IACYAE+A
Sbjct:  363 DLPWKSRNLAKVCVDPETGGYELVEFSLKTLEKVWYTEEKGGGKWLLEEKTAQLTRYSKVVSEQFNRSGFNCMSVRLAVKSLSATAVRMCNDANAKLVRSGQKPDLSIACYAEMA 477
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BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Match: D8LK65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 6.380e-21
Identity = 50/98 (51.02%), Postives = 63/98 (64.29%), Query Frame = 0 
Query:    1 MSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLEKVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAK 98
            MSDP H  KK+VN+L  SD+P + R L +LW +    +Y+ V F LKTLEKV+  EE GGG  +  EQ A L RF    PE F  NS+N M+VGL+AK
Sbjct:  164 MSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEAAEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13370.2691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K071_9PHAE1.940e-3258.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK65_ECTSI6.380e-2151.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13370contigEcto-sp13_S_contig13370:490..1219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13370.2691.1mRNA_Ecto-sp13_S_contig13370.2691.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13370 461..1517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13370.2691.1 ID=prot_Ecto-sp13_S_contig13370.2691.1|Name=mRNA_Ecto-sp13_S_contig13370.2691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
MSDPPHRWKKIVNSLHQSDLPWQSRKLARLWVDPVTGEYDLVPFFLKTLE
KVYYNEELGGGAFTQNEQVATLQRFGNMRPEQFNWNSYNNMNVGLAAKNL
SGSAVRACNSANAKLVANGQAPNAEIACYAELAH*
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