prot_Ecto-sp13_S_contig13340.2674.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig13340.2674.1
Unique Name	prot_Ecto-sp13_S_contig13340.2674.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	216

Homology

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BLAST of mRNA_Ecto-sp13_S_contig13340.2674.1 vs. uniprot
Match: A0A6H5L5X7_9PHAE (GT48 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X7_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 5.340e-138
Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 0

Query:    1 MRKEDVIGDREMAGLKYFVVSLHRPNSVLALLPGFLVSGKIQGSVKTARDFARQQDELIKDLVAVDAWGKGEDKGARYEAAERRKPATGFFDMIENFAMPDHDEYGVARAADLKVVKQMRTLRLEQKRFLRGMLSVSDAIREVAFLHLFLSVFFLVEHLCQSEAICAGLWELYEFVTGLAGSNEAAGSIADTLMEANPNRAIFLLHQWPDVVSALE 216
            MRKEDVIGDREMAGLKYFVVSLHRPNSVLALLPGFLVSGKIQGSVKTARDFARQQDELIKDLVAVDAWGKGEDKGARYEAAERRKPATGFFDMIEN AMPDHDEYGVARAADLKVVKQMRTLRLEQKRFLRGMLSVSDAIREVAFLHLFLSVFFLVEHLCQ+EAICAG+WELYEFVTGLAGSN+AAGSIADTLMEANP RAIFLLHQWPDVV ALE
Sbjct:  200 MRKEDVIGDREMAGLKYFVVSLHRPNSVLALLPGFLVSGKIQGSVKTARDFARQQDELIKDLVAVDAWGKGEDKGARYEAAERRKPATGFFDMIENLAMPDHDEYGVARAADLKVVKQMRTLRLEQKRFLRGMLSVSDAIREVAFLHLFLSVFFLVEHLCQNEAICAGMWELYEFVTGLAGSNDAAGSIADTLMEANPKRAIFLLHQWPDVVLALE 415

[Close]

BLAST of mRNA_Ecto-sp13_S_contig13340.2674.1 vs. uniprot
Match: D7FXN7_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN7_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 1.760e-133
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 0

Query:    1 MRKEDVIGDREMAGLKYFVVSLHRPNSVLALLPGFLVSGKIQGSVKTARDFARQQDELIKDLVAVDAWGKGEDKGARYEAAERRKPATGFFDMIENFAMPDHDEYGVARAADLKVVKQMRTLRLEQKRFLRGMLSVSDAIREVAFLHLFLSVFFLVEHLCQSEAICAGLWELYEFVTGLAGSNEAAGSIADTLMEANPNRAIFLLHQWPDVVSALE 216
            MRKEDVIGDREMAGLKYFVVSLHRPNSVLALLPGFLVSGKIQGSVKTARDFARQQDELIKDLVAVDAWGKGEDKGARYEAAERRKPATGFFDMIE+FAMPDHDEYGVARAADLKVVKQMRTLRLEQKRFLRGMLSVSDAIREVAFLHLFLSVFFLVEHLCQSEAICAGLWELYEFVTGLAGSN+AAGSIADTLMEANPNRAIFLLHQWPDVVSALE
Sbjct:  685 MRKEDVIGDREMAGLKYFVVSLHRPNSVLALLPGFLVSGKIQGSVKTARDFARQQDELIKDLVAVDAWGKGEDKGARYEAAERRKPATGFFDMIESFAMPDHDEYGVARAADLKVVKQMRTLRLEQKRFLRGMLSVSDAIREVAFLHLFLSVFFLVEHLCQSEAICAGLWELYEFVTGLAGSNDAAGSIADTLMEANPNRAIFLLHQWPDVVSALE 900

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig13340.2674.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig13340.2674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L5X7_9PHAE	5.340e-138	97.22	GT48 protein (Fragment) n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FXN7_ECTSI	1.760e-133	99.07	1,3-beta-glucan synthase n=1 Tax=Ectocarpus silicu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 129..156
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 157..216
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..128

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig13340	contig	Ecto-sp13_S_contig13340:1800..4636 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig13340.2674.1	mRNA_Ecto-sp13_S_contig13340.2674.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig13340 1786..4636 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig13340.2674.1 ID=prot_Ecto-sp13_S_contig13340.2674.1|Name=mRNA_Ecto-sp13_S_contig13340.2674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp
MRKEDVIGDREMAGLKYFVVSLHRPNSVLALLPGFLVSGKIQGSVKTARD
FARQQDELIKDLVAVDAWGKGEDKGARYEAAERRKPATGFFDMIENFAMP
DHDEYGVARAADLKVVKQMRTLRLEQKRFLRGMLSVSDAIREVAFLHLFL
SVFFLVEHLCQSEAICAGLWELYEFVTGLAGSNEAAGSIADTLMEANPNR
AIFLLHQWPDVVSALE