prot_Ecto-sp13_S_contig13240.2612.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13240.2612.1
Unique Nameprot_Ecto-sp13_S_contig13240.2612.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length119
Homology
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: A0A6H5JL45_9PHAE (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL45_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 8.500e-80
Identity = 116/119 (97.48%), Postives = 117/119 (98.32%), Query Frame = 0
Query:    1 ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDFKWHRAQQSPNWAVIPESER 119
            ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRF+PAGLRYPEYQ HLQAAGLDEDAVTN WGDVKDFKWHRAQQSPNWAVIPESER
Sbjct:  281 ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFAPAGLRYPEYQQHLQAAGLDEDAVTNTWGDVKDFKWHRAQQSPNWAVIPESER 399          
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: A0A835ZAT0_9STRA (Tubulin binding cofactor C-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 3.670e-36
Identity = 64/146 (43.84%), Postives = 80/146 (54.79%), Query Frame = 0
Query:    1 ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGL--------------------DEDA-------VTNAWGDVKDFKWHRAQQSPNWAVIPESER 119
            ALRLR L  C +  GP+RG +YVE C NC I+ A RQLR+H S  +DFYV   SGPIIE C+  RF+P  L YP  Q H+  A L                    D  A       +   W DVKDF WHR++QSPNW ++P+ +R
Sbjct:    7 ALRLRNLRDCLIYSGPIRGSVYVEACHNCTIMVACRQLRVHGSSGIDFYVHTLSGPIIEGCTATRFAPYRLSYPGLQQHMAEAALILPQRSATQTYLPTPETRAADSAAGTASALPIVEPWRDVKDFLWHRSRQSPNWCIMPDEDR 152          
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: A0A5P1FB15_ASPOF (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FB15_ASPOF)

HSP 1 Score: 132 bits (332), Expect = 4.690e-35
Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = 0
Query:    1 ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDFKWHRAQQSPNWAVIPESE 118
            AL + RLT+CRV CGPV G I +E  R C+ V A  Q+RIH++++ DFY+ V S PIIEDC G+RF P    Y      L+ + LDE+  T  WG+V DFKW RA QSPNW +IPE E
Sbjct:  218 ALFINRLTNCRVFCGPVLGSILIEEVRGCLFVLASHQIRIHQAKETDFYLRVRSRPIIEDCGGVRFGPYRFSYEGVDDELRESRLDEE--TGNWGNVDDFKWLRAVQSPNWCLIPEEE 333          
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: UPI001262B1A3 (tubulin-folding cofactor C-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001262B1A3)

HSP 1 Score: 131 bits (330), Expect = 7.160e-35
Identity = 61/119 (51.26%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    1 ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDFKWHRAQQSPNWAVIPESER 119
            AL + +L  C++  GPV G I +E   +CV+V A  Q+RIH ++  DFY+ V S PIIEDC+G+RF P  L+Y   +  L+AAGL E+  T  WG+V DFKW RA QSPNW+V+PE ER
Sbjct:  205 ALFVNKLKGCKIYAGPVTGSILIEEVEDCVLVLASHQIRIHFAKSCDFYLRVRSRPIIEDCNGIRFGPYCLKYEGIEEDLEAAGLSEE--TGNWGNVDDFKWLRAVQSPNWSVLPEDER 321          
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: K8YVR5_NANGC (Tubulin-specific chaperone c (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YVR5_NANGC)

HSP 1 Score: 126 bits (316), Expect = 9.090e-35
Identity = 56/115 (48.70%), Postives = 72/115 (62.61%), Query Frame = 0
Query:    2 LRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDFKWHRAQQSPNWAVIPE 116
            LR   L  C+++CGPV GP+Y++ C  C +  A RQLRIH + D   YV   +GPIIEDC  L F P  L YP  +  ++ AGL      NAW +VKDFKW RAQ SP+W V+P+
Sbjct:   36 LRCENLRDCKLLCGPVAGPVYLQDCIGCTLYVASRQLRIHRTYDTTLYVHTVAGPIIEDCDRLCFGPWALAYPGREEQVEEAGLG--GTENAWREVKDFKWLRAQASPHWQVLPQ 148          
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: A0A7S2BQ48_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BQ48_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.570e-34
Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 0
Query:    1 ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDFKWHRAQQSPNWAVIPESER 119
            AL++  ++ C +  GPV G + V    N  I    RQLRIH+S + ++YV +ASGPIIEDCSG+RF+P  L YP+    ++ A L     ++ W  VKDFKWHRAQ SPNW+V+PE +R
Sbjct:   93 ALKMENISGCSLYIGPVAGSLLVREVHNSDIFVCARQLRIHDSTECNWYVQMASGPIIEDCSGMRFAPYTLEYPDLPAQVERAALQSTVGSDWWRQVKDFKWHRAQASPNWSVLPEEKR 211          
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: A0A4D9D5F9_9STRA (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5F9_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.560e-34
Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = 0
Query:    2 LRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDFKWHRAQQSPNWAVIPE 116
            LR   L  C+++CGPV GP+Y++ C  C +  AGRQLR+H + D   YV   +GPIIEDC  LRF P  L YP  +  ++ AGL      NAW +VKDFKW RAQ SP+W V+P+
Sbjct:  240 LRCENLRDCKLLCGPVAGPVYLQDCVGCTLYVAGRQLRVHRTYDTTLYVHTVAGPIIEDCDRLRFGPWALAYPGREEQVEEAGLG--GTENAWREVKDFKWLRAQASPHWQVLPQ 352          
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: A0A7S2YYA8_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2YYA8_9CHLO)

HSP 1 Score: 123 bits (308), Expect = 5.140e-34
Identity = 55/112 (49.11%), Postives = 77/112 (68.75%), Query Frame = 0
Query:    8 TSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDFKWHRAQQSPNWAVIPESER 119
            T+C+V CGPV G +Y+EG R+CV++AA  Q+RIH++ +VDFYV   S PIIE CS +RF+P G  Y   +  LQ A L E+   + W DVKDF W ++  SPNW+++P  +R
Sbjct:    1 TNCKVYCGPVDGSLYLEGARDCVVMAAAHQVRIHKAVNVDFYVRSRSYPIIEKCSDVRFAPYGFSYEGLEARLQEAKLGEE--NDLWADVKDFGWLKSTPSPNWSILPAEQR 110          
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: A0A7N2M1N9_QUELO (C-CAP/cofactor C-like domain-containing protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2M1N9_QUELO)

HSP 1 Score: 129 bits (325), Expect = 6.470e-34
Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    1 ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDFKWHRAQQSPNWAVIPESER 119
            AL + RL +CRV  GPV G I +EG  +CV V A  Q+RIH ++  DFY+ V S PIIED +G+RF+P  L Y   +  L+ A L+E+  T  WG+V DFKW RA QSPNW+V+PE+ER
Sbjct:  231 ALFVHRLKNCRVYAGPVTGSILIEGAEDCVFVMASHQIRIHNAKGTDFYLRVRSRPIIEDSTGVRFAPYCLSYEGIEEDLREASLNEE--TGNWGNVDDFKWLRAVQSPNWSVLPENER 347          
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Match: A0A6A6K750_HEVBR (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6K750_HEVBR)

HSP 1 Score: 128 bits (322), Expect = 1.460e-33
Identity = 62/119 (52.10%), Postives = 78/119 (65.55%), Query Frame = 0
Query:    1 ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYVLVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDFKWHRAQQSPNWAVIPESER 119
            A  + RL +CRV  GPV G I +E   NCV V A  Q+RIH ++  DFY+ V S PIIEDC G+RF+P  L Y   +  ++ AGL +D  T  W +V DFKW RA QSPNW+V+PESER
Sbjct:  220 AFFINRLRNCRVYAGPVMGSILIEEVENCVFVLASHQIRIHYAKGSDFYLRVRSRPIIEDCEGVRFAPYRLSYEGIEDDMRKAGLGKD--TGNWSNVDDFKWLRAVQSPNWSVLPESER 336          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13240.2612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL45_9PHAE8.500e-8097.48C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A835ZAT0_9STRA3.670e-3643.84Tubulin binding cofactor C-domain-containing prote... [more]
A0A5P1FB15_ASPOF4.690e-3552.54C-CAP/cofactor C-like domain-containing protein n=... [more]
UPI001262B1A37.160e-3551.26tubulin-folding cofactor C-like n=1 Tax=Pistacia v... [more]
K8YVR5_NANGC9.090e-3548.70Tubulin-specific chaperone c (Fragment) n=2 Tax=Na... [more]
A0A7S2BQ48_9STRA1.570e-3447.90Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9D5F9_9STRA2.560e-3449.57C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A7S2YYA8_9CHLO5.140e-3449.11Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
A0A7N2M1N9_QUELO6.470e-3452.10C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A6A6K750_HEVBR1.460e-3352.10C-CAP/cofactor C-like domain-containing protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006599CARP motifSMARTSM00673carpcoord: 26..60
e-value: 0.0048
score: 26.1
IPR012945Tubulin binding cofactor C-like domainPFAMPF07986TBCCcoord: 2..100
e-value: 1.5E-31
score: 108.6
IPR016098Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalGENE3D2.160.20.70coord: 1..119
e-value: 2.7E-45
score: 155.8
IPR027684Tubulin-specific chaperone CPANTHERPTHR15139TUBULIN FOLDING COFACTOR Ccoord: 1..119
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 1..102
score: 28.65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13240contigEcto-sp13_S_contig13240:400..2067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13240.2612.1mRNA_Ecto-sp13_S_contig13240.2612.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13240 400..2067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13240.2612.1 ID=prot_Ecto-sp13_S_contig13240.2612.1|Name=mRNA_Ecto-sp13_S_contig13240.2612.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=119bp
ALRLRRLTSCRVVCGPVRGPIYVEGCRNCVIVAAGRQLRIHESRDVDFYV
LVASGPIIEDCSGLRFSPAGLRYPEYQHHLQAAGLDEDAVTNAWGDVKDF
KWHRAQQSPNWAVIPESER
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006599CARP_motif
IPR012945Tubulin-bd_cofactor_C_dom
IPR016098CAP/MinC_C
IPR027684TBCC
IPR017901C-CAP_CF_C-like