mRNA_Ecto-sp13_S_contig132.2594.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: D8LN02_ECTSI (Dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN02_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.720e-53 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1
Query: 1 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEPPE 270
QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEPPE
Sbjct: 1383 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEPPE 1472
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: A0A6H5L381_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L381_9PHAE) HSP 1 Score: 183 bits (464), Expect = 9.650e-52 Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 1
Query: 4 VRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEPPE 270
VRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKE PE
Sbjct: 471 VRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKETPE 559
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: A0A7S1XT50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XT50_9STRA) HSP 1 Score: 156 bits (395), Expect = 2.740e-47 Identity = 72/90 (80.00%), Postives = 82/90 (91.11%), Query Frame = 1
Query: 1 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEPPE 270
Q++KMLQLKEALDQRMGCV+VGPSGCGKST+W++LR A+ KCGQ V HV+NPKSM RQRLLGHMDLDTREW DGVLT AAR+VV+EPPE
Sbjct: 23 QIKKMLQLKEALDQRMGCVVVGPSGCGKSTVWNVLRTALEKCGQKVVVHVMNPKSMHRQRLLGHMDLDTREWTDGVLTEAARRVVREPPE 112
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: A0A485LI71_9STRA (Aste57867_21689 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI71_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.630e-43 Identity = 72/88 (81.82%), Postives = 82/88 (93.18%), Query Frame = 1
Query: 1 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEP 264
Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+HAM++CGQ V THV+NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKEP
Sbjct: 1956 QIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQHAMVQCGQLVKTHVMNPKSMPRERLLGHMDLDTREWHDGVLTDAARKVVKEP 2043
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: A0A0P1AJ37_PLAHL (Dynein heavy chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ37_PLAHL) HSP 1 Score: 159 bits (401), Expect = 3.040e-43 Identity = 72/88 (81.82%), Postives = 83/88 (94.32%), Query Frame = 1
Query: 1 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEP 264
Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+HA+I+CGQ V THV+NPKSMPR+RLLGHMDLDTREW DGVLTAAAR+VVKEP
Sbjct: 2049 QIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQHALIQCGQLVKTHVMNPKSMPRERLLGHMDLDTREWEDGVLTAAARQVVKEP 2136
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: A0A1V9ZJN7_9STRA (Dynein heavy chain n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJN7_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.050e-42 Identity = 72/88 (81.82%), Postives = 81/88 (92.05%), Query Frame = 1
Query: 1 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEP 264
Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ AMIKCGQ V TH++NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKEP
Sbjct: 1938 QIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQAAMIKCGQLVKTHIMNPKSMPRERLLGHMDLDTREWHDGVLTDAARKVVKEP 2025
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: A0A1W0A6P2_9STRA (Dynein heavy chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6P2_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.440e-42 Identity = 71/88 (80.68%), Postives = 81/88 (92.05%), Query Frame = 1
Query: 1 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEP 264
Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ AMI+CGQ V TH++NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKEP
Sbjct: 3224 QIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQQAMIRCGQLVKTHIMNPKSMPRERLLGHMDLDTREWHDGVLTDAARKVVKEP 3311
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: A0A067CTG5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CTG5_SAPPC) HSP 1 Score: 156 bits (395), Expect = 1.950e-42 Identity = 71/88 (80.68%), Postives = 81/88 (92.05%), Query Frame = 1
Query: 1 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEP 264
Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ AMI+CGQ V TH++NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKEP
Sbjct: 1922 QIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQQAMIQCGQLVKTHIMNPKSMPRERLLGHMDLDTREWHDGVLTDAARKVVKEP 2009
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: T0R6A9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R6A9_SAPDV) HSP 1 Score: 156 bits (395), Expect = 1.960e-42 Identity = 71/88 (80.68%), Postives = 81/88 (92.05%), Query Frame = 1
Query: 1 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEP 264
Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ AMI+CGQ V TH++NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKEP
Sbjct: 1950 QIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQQAMIQCGQLVKTHIMNPKSMPRERLLGHMDLDTREWHDGVLTDAARKVVKEP 2037
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Match: D0NN79_PHYIT (Dynein heavy chain n=9 Tax=Phytophthora TaxID=4783 RepID=D0NN79_PHYIT) HSP 1 Score: 156 bits (395), Expect = 1.960e-42 Identity = 72/88 (81.82%), Postives = 82/88 (93.18%), Query Frame = 1
Query: 1 QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEP 264
Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ A+IKCGQ V THV+NPKSMPR+RLLGHMDLDTREW DGVLTAAAR+VVKEP
Sbjct: 2023 QIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWLVLQQALIKCGQLVKTHVMNPKSMPRERLLGHMDLDTREWEDGVLTAAARQVVKEP 2110 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig132.2594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig132.2594.1 >prot_Ecto-sp13_S_contig132.2594.1 ID=prot_Ecto-sp13_S_contig132.2594.1|Name=mRNA_Ecto-sp13_S_contig132.2594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp MLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKback to top mRNA from alignment at Ecto-sp13_S_contig132:24126..25083+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig132.2594.1 ID=mRNA_Ecto-sp13_S_contig132.2594.1|Name=mRNA_Ecto-sp13_S_contig132.2594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=958bp|location=Sequence derived from alignment at Ecto-sp13_S_contig132:24126..25083+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig132:24126..25083+ >mRNA_Ecto-sp13_S_contig132.2594.1 ID=mRNA_Ecto-sp13_S_contig132.2594.1|Name=mRNA_Ecto-sp13_S_contig132.2594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=258bp|location=Sequence derived from alignment at Ecto-sp13_S_contig132:24126..25083+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |