prot_Ecto-sp13_S_contig13180.2580.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13180.2580.1
Unique Nameprot_Ecto-sp13_S_contig13180.2580.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: D8LHJ8_ECTSI (CHROMODOMAIN HELICASE DNA BINDING n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ8_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 5.710e-72
Identity = 129/133 (96.99%), Postives = 129/133 (96.99%), Query Frame = 0
Query:    2 RAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDK-HLVKHSGKLVLLDKLLPRLKQQGH 133
            RAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIE  L TEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDK HLVKHSGKLVLLDKLLPRLKQQGH
Sbjct: 1036 RAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEVEL-TEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDKEHLVKHSGKLVLLDKLLPRLKQQGH 1167          
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: D8LDG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG9_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 6.750e-57
Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0
Query:    3 AEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDK-HLVKHSGKLVLLDKLLPRLKQQGH 133
            AEDVS LQE IKPYLLRRMKE VEKAVPPKEE IIE  L TEIQKQYYRAIY++NTTFLLQGKK+A+D PSLMNLAMQLRKCCNHP+LITGVED V  Q+G +   K HLVKHSGKLVLLDKLLPRLK QGH
Sbjct:  626 AEDVSELQEAIKPYLLRRMKEGVEKAVPPKEEIIIEVEL-TEIQKQYYRAIYDRNTTFLLQGKKQAKDAPSLMNLAMQLRKCCNHPFLITGVEDDVSQQLGGNKTSKEHLVKHSGKLVLLDKLLPRLKTQGH 756          
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: A0A6H5JB56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB56_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 7.890e-51
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
Query:   42 LTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDK-HLVKHSGKLVLLDKLLPRLKQQGH 133
            LTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDK HLVKHSGKLVLLDKLLPRLKQQGH
Sbjct:  726 LTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDKEHLVKHSGKLVLLDKLLPRLKQQGH 818          
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: A0A6H5KR34_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR34_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.860e-49
Identity = 99/131 (75.57%), Postives = 107/131 (81.68%), Query Frame = 0
Query:    3 AEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDKHLVKHSGKLVLLDKLLPRLKQQGH 133
            AEDVS LQE IK YLLRRMKEDVEKAV PKEE IIE  L TEIQKQYYRAIY++NTTFLLQGKK+A+D PSLMNLAMQLRKC NHPYLIT +   ++         +HLVKHSGKLVLLDKLLPRLK QGH
Sbjct:  635 AEDVSELQEEIKSYLLRRMKEDVEKAVLPKEEIIIEVEL-TEIQKQYYRAIYDRNTTFLLQGKKQAKDAPSLMNLAMQLRKCYNHPYLITRIFSRLQ---------EHLVKHSGKLVLLDKLLPRLKTQGH 755          
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: A0A7R9Z8Y3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z8Y3_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.210e-47
Identity = 85/134 (63.43%), Postives = 104/134 (77.61%), Query Frame = 0
Query:    1 KRAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGED-KHLVKHSGKLVLLDKLLPRLKQQGH 133
            K  E +  L E I+PY+LRR+KEDVEK+VPPKEET+IE  L T +QKQYYRA+YE+N  FL + KK+A DGPS+ NLAMQLRKCCNHP+L+ GVE+ VR Q  D+  D   L K SGKLVLLDKLLP+L++ GH
Sbjct:   32 KSKEKLDELHETIRPYILRRLKEDVEKSVPPKEETLIEVEL-TVLQKQYYRALYEKNVQFLHKNKKKALDGPSINNLAMQLRKCCNHPFLLRGVEEEVRNQDKDTKNDGDFLAKASGKLVLLDKLLPKLREGGH 164          
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: B5YP65_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YP65_THAPS)

HSP 1 Score: 156 bits (394), Expect = 3.750e-44
Identity = 84/130 (64.62%), Postives = 101/130 (77.69%), Query Frame = 0
Query:    4 EDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDKHLVKHSGKLVLLDKLLPRLKQQGH 133
            E V  L E I+P++LRR+KEDVEK+VPPKEET+IE  L T +QKQYYRA+YE+N  FL +GKK   DGPS+ NLAMQLRKCCNHP+L+TGVE  VR+Q  +      +V+ SGKLVLLDKLLPRLK  GH
Sbjct:   91 EKVDELHETIRPFILRRLKEDVEKSVPPKEETLIEVEL-TVLQKQYYRALYEKNLKFLHRGKK-PLDGPSINNLAMQLRKCCNHPFLLTGVESEVRLQQPNKEIVDLMVEASGKLVLLDKLLPRLKADGH 218          
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: A0A7S4JUU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JUU9_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.660e-42
Identity = 83/127 (65.35%), Postives = 100/127 (78.74%), Query Frame = 0
Query:    9 LQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQ--MGDSGEDKHLVKHSGKLVLLDKLLPRLKQQGH 133
            L E I+PY+LRR+KEDVEK+VPPKEET+IE  L T +QKQYYRA+YE+N  FL + KK+A DGPS+ NLAMQLRKCCNHP+L+ GVE+ V+ Q   G + E   LVK SGKLVLLDKLLP+L   GH
Sbjct:  394 LHEQIRPYILRRLKEDVEKSVPPKEETLIEVEL-TVLQKQYYRALYEKNVQFLHRNKKKALDGPSINNLAMQLRKCCNHPFLLKGVEEEVKAQDKAGTTSEADFLVKSSGKLVLLDKLLPKLSDGGH 519          
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: K0SJP8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJP8_THAOC)

HSP 1 Score: 158 bits (400), Expect = 2.390e-42
Identity = 87/133 (65.41%), Postives = 102/133 (76.69%), Query Frame = 0
Query:    1 KRAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDKHLVKHSGKLVLLDKLLPRLKQQGH 133
            K  E V  L E+I+P++LRR+KEDVEK+VPPKEET+IE  L T +QKQYYRA+YE+N  FL + KK A DGPSL NLAMQLRKCCNHP+L+TGVE  VR Q   +   + LV  SGKLVLLDKLLPRLK  GH
Sbjct:  607 KSKEKVDELHESIRPFILRRLKEDVEKSVPPKEETLIEVEL-TVLQKQYYRALYEKNLKFLHKNKK-AIDGPSLNNLAMQLRKCCNHPFLLTGVEQEVRQQNPSADVTQSLVNASGKLVLLDKLLPRLKADGH 737          
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: A0A7S4AF60_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AF60_9STRA)

HSP 1 Score: 147 bits (371), Expect = 4.760e-42
Identity = 81/137 (59.12%), Postives = 99/137 (72.26%), Query Frame = 0
Query:    1 KRAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDS----GEDKHLVKHSGKLVLLDKLLPRLKQQGH 133
            K  E +  L + I+PY+LRR+KEDVEK+VPPKEET+IE  L T  QKQYYRA+YE+N  FL + KK+A DGPSL NLAMQLRKCCNH +L+ GVE  +R++         E   +   SGKLVLLDKLLPRLK+ GH
Sbjct:   35 KSKEKIDDLHDQIRPYILRRLKEDVEKSVPPKEETLIEVEL-TLAQKQYYRALYEKNVGFLHKNKKKALDGPSLNNLAMQLRKCCNHLFLLNGVEGDMRLKEKQKHSTFDEGDFVANGSGKLVLLDKLLPRLKENGH 170          
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Match: A0A7S2YFV7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YFV7_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.850e-41
Identity = 83/133 (62.41%), Postives = 99/133 (74.44%), Query Frame = 0
Query:    1 KRAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGEDKHLVKHSGKLVLLDKLLPRLKQQGH 133
            K  E V  L E ++PY+LRR+KEDVEK++PPKEETIIE  L T  QKQYYRA+YE+N  FL + K +A DGPSL NLAMQLRKCCNH  L+ G+E+ +R Q     E   LVK SGK VLLDKLLPRLK++GH
Sbjct:  267 KSKESVDDLHETLRPYILRRLKEDVEKSMPPKEETIIEVEL-TLSQKQYYRALYEKNVRFLHKNKSKALDGPSLNNLAMQLRKCCNHACLLNGIEEELRKQNPGLSEPDFLVKGSGKFVLLDKLLPRLKEEGH 398          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13180.2580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHJ8_ECTSI5.710e-7296.99CHROMODOMAIN HELICASE DNA BINDING n=1 Tax=Ectocarp... [more]
D8LDG9_ECTSI6.750e-5781.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB56_9PHAE7.890e-5198.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR34_9PHAE5.860e-4975.57Helicase ATP-binding domain-containing protein n=1... [more]
A0A7R9Z8Y3_9STRA2.210e-4763.43Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
B5YP65_THAPS3.750e-4464.62Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S4JUU9_9STRA1.660e-4265.35Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
K0SJP8_THAOC2.390e-4265.41Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4AF60_9STRA4.760e-4259.12Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S2YFV7_9STRA2.850e-4162.41Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 3..29
e-value: 4.2E-36
score: 126.4
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 4..91
e-value: 1.8E-11
score: 43.4
NoneNo IPR availableGENE3D3.40.50.300coord: 30..133
e-value: 4.2E-36
score: 126.4
NoneNo IPR availablePANTHERPTHR45623FAMILY NOT NAMEDcoord: 2..133
NoneNo IPR availablePANTHERPTHR45623:SF11KISMET, ISOFORM Ccoord: 2..133
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13180contigEcto-sp13_S_contig13180:1152..3012 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13180.2580.1mRNA_Ecto-sp13_S_contig13180.2580.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13180 1152..3012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13180.2580.1 ID=prot_Ecto-sp13_S_contig13180.2580.1|Name=mRNA_Ecto-sp13_S_contig13180.2580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
KRAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEASLLTEIQKQYY
RAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRV
QMGDSGEDKHLVKHSGKLVLLDKLLPRLKQQGH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase