prot_Ecto-sp13_S_contig1317.2571.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1317.2571.1
Unique Name	prot_Ecto-sp13_S_contig1317.2571.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	581

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1317.2571.1 vs. uniprot
Match: A0A6H5K224_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K224_9PHAE)

HSP 1 Score: 668 bits (1724), Expect = 6.350e-219
Identity = 510/572 (89.16%), Postives = 517/572 (90.38%), Query Frame = 0

Query:   10 MAESVDGEGXXXXXXXXXXXXXRQEDPRLHLQQEELKEQLEQLSMQQERQQLEHLRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRQPTAERLTGSSXXXXXXXXXXXXXRFWRRLCFWVGAIACLVLLILVQIYPPLLVKEKAPPAFFIFPKSTKRLKFLGMAVDLDDIPLLKAALAKMPNVPRLDIPGIIRALWNCLPSMAAWLEAFGNIFDGTSVFLAEMWTDRLTPVFRDIVTGVRGMPGMVRGFFISFHNAWWPVALSIWGAFCGSLGSLAASLWGRARAVPPLFLALLQALGGVLEGLPSLLXXXLRRALVRLSGKLHSLLGLLVLGAGYVGQGFAFLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETLEGLLSSAGILMDSRLGLVLEALATLGGLGVATVAGGLSFVGETVGGFLGLFGLVGVGAARVGSFGAGLFRGVYGIVAAIEWTFWPVVALVASIIALIMSGAWWRSSRVS 581
            MAESVDGEG             RQEDPRLHLQQEELKEQLEQLSMQQERQQLEHLRE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   QPTAERLTGSSXXXXXXXXXXXXX FWRRLCFWVGAIACL+LLILVQIYPPLLVKEKAPPAFFIFPKSTKRLKFLGMAVDLDDIPLLKAALAKMPNVPRLDIPGIIRALWNCLPSMAAWLEA GNIFDGTSVFLAEMWTDRLTPV RDI  GVRGMPGMVRGFFISFHNAWWPVALS+WGAFCGSLGSLAASLWGRARAVPPLFLALLQA GGVLEGLPSLL   LRRALVRLSGKLHSLLGLLVLGAGY+GQGFAFLGXXXXXXXXXXXXXXXXXXXX                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GE+LEGL SSAGILMDSRLGL+LEALATLGGLGVATVAGGLSFVGETVGGFLGLFGLVGVGAARVGSFGAGLFRGVYGI +AIEWTFWPVVALVASIIALIMSGAWWRSSR +
Sbjct:    1 MAESVDGEGGGGRAERKQREEERQEDPRLHLQQEELKEQLEQLSMQQERQQLEHLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTAERLTGSSXXXXXXXXXXXXXXFWRRLCFWVGAIACLILLILVQIYPPLLVKEKAPPAFFIFPKSTKRLKFLGMAVDLDDIPLLKAALAKMPNVPRLDIPGIIRALWNCLPSMAAWLEACGNIFDGTSVFLAEMWTDRLTPVLRDIFAGVRGMPGMVRGFFISFHNAWWPVALSVWGAFCGSLGSLAASLWGRARAVPPLFLALLQAFGGVLEGLPSLLLLLLRRALVRLSGKLHSLLGLLVLGAGYLGQGFAFLGXXXXXXXXXXXXXXXXXXXXAAYLAACLAQLLSFAGVSVGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALGGESLEGLFSSAGILMDSRLGLLLEALATLGGLGVATVAGGLSFVGETVGGFLGLFGLVGVGAARVGSFGAGLFRGVYGIFSAIEWTFWPVVALVASIIALIMSGAWWRSSRTA 572

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BLAST of mRNA_Ecto-sp13_S_contig1317.2571.1 vs. uniprot
Match: D8LIS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS0_ECTSI)

HSP 1 Score: 507 bits (1306), Expect = 7.450e-163
Identity = 367/386 (95.08%), Postives = 372/386 (96.37%), Query Frame = 0

Query:  196 MAVDLDDIPLLKAALAKMPNVPRLDIPGIIRALWNCLPSMAAWLEAFGNIFDGTSVFLAEMWTDRLTPVFRDIVTGVRGMPGMVRGFFISFHNAWWPVALSIWGAFCGSLGSLAASLWGRARAVPPLFLALLQALGGVLEGLPSLLXXXLRRALVRLSGKLHSLLGLLVLGAGYVGQGFAFLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETLEGLLSSAGILMDSRLGLVLEALATLGGLGVATVAGGLSFVGETVGGFLGLFGLVGVGAARVGSFGAGLFRGVYGIVAAIEWTFWPVVALVASIIALIMSGAWWRSSRVS 581
            MAVDLDDIPLLKAALAKMPNVPRLDIPGIIRALWNCLPSMAAWLEAFGNIFDGTSVFLAEMWTDRLTPV RDI  GVRGMPGMVRGFFISFHNAWWPVALS+WGAFCGSLGSLAASLWGRARAVPPLFLALLQA GGVLEGLPSLL   LRRALVRLSGKLHSLLGLLVLGAGY+GQG AFLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GE+LEGL SSAGILMDSRLGL+LEALATLGGLGVATVAGGLSFVGETVGGFLGLFGLVGVGAARVGSFGAGLFRGVYGIVAAIEWTFWPVVALVASIIALIMSGAWWRSSR +
Sbjct:    1 MAVDLDDIPLLKAALAKMPNVPRLDIPGIIRALWNCLPSMAAWLEAFGNIFDGTSVFLAEMWTDRLTPVLRDIAAGVRGMPGMVRGFFISFHNAWWPVALSVWGAFCGSLGSLAASLWGRARAVPPLFLALLQAFGGVLEGLPSLLLLVLRRALVRLSGKLHSLLGLLVLGAGYLGQGLAFLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALGGESLEGLFSSAGILMDSRLGLLLEALATLGGLGVATVAGGLSFVGETVGGFLGLFGLVGVGAARVGSFGAGLFRGVYGIVAAIEWTFWPVVALVASIIALIMSGAWWRSSRTA 386

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1317.2571.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1317.2571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K224_9PHAE	6.350e-219	89.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LIS0_ECTSI	7.450e-163	95.08	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..87
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 464..483
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 484..488
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 553..575
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 513..518
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 169..288
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 542..552
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 576..581
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 427..452
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 311..321
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 381..391
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 453..463
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 346..356
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 322..345
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..148
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 357..380
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 416..426
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 392..415
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 519..541
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 489..512
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 289..310
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 149..168
None	No IPR available	TMHMM	TMhelix		coord: 519..541
None	No IPR available	TMHMM	TMhelix		coord: 322..344
None	No IPR available	TMHMM	TMhelix		coord: 487..509
None	No IPR available	TMHMM	TMhelix		coord: 388..410
None	No IPR available	TMHMM	TMhelix		coord: 151..173
None	No IPR available	TMHMM	TMhelix		coord: 359..381
None	No IPR available	TMHMM	TMhelix		coord: 553..575
None	No IPR available	TMHMM	TMhelix		coord: 288..310
None	No IPR available	TMHMM	TMhelix		coord: 430..452

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1317	contig	Ecto-sp13_S_contig1317:15432..17764 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1317.2571.1	mRNA_Ecto-sp13_S_contig1317.2571.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1317 12640..17764 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1317.2571.1 ID=prot_Ecto-sp13_S_contig1317.2571.1|Name=mRNA_Ecto-sp13_S_contig1317.2571.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=581bp
MLDRRRLSSMAESVDGEGGGGGAERKQREEERQEDPRLHLQQEELKEQLE
QLSMQQERQQLEHLRELHEQEQQLEQLQERLRLRQQLPGHQPQQQERQPQ
PRIQPLSQRQSPAPPTQQRQPTAERLTGSSGGGGGGGGVDSRRRFWRRLC
FWVGAIACLVLLILVQIYPPLLVKEKAPPAFFIFPKSTKRLKFLGMAVDL
DDIPLLKAALAKMPNVPRLDIPGIIRALWNCLPSMAAWLEAFGNIFDGTS
VFLAEMWTDRLTPVFRDIVTGVRGMPGMVRGFFISFHNAWWPVALSIWGA
FCGSLGSLAASLWGRARAVPPLFLALLQALGGVLEGLPSLLLLLLRRALV
RLSGKLHSLLGLLVLGAGYVGQGFAFLGGLAWRGAGHVGSLFLSLGHVAA
YLAACLAQLLSFAGVSVGVRVGLLRQAFVALGLWIARGLTYVWQAVVFLG
IVTGRGLGHLGKAFYALGGETLEGLLSSAGILMDSRLGLVLEALATLGGL
GVATVAGGLSFVGETVGGFLGLFGLVGVGAARVGSFGAGLFRGVYGIVAA
IEWTFWPVVALVASIIALIMSGAWWRSSRVS