prot_Ecto-sp13_S_contig1316.2565.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1316.2565.1
Unique Nameprot_Ecto-sp13_S_contig1316.2565.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1425
Homology
BLAST of mRNA_Ecto-sp13_S_contig1316.2565.1 vs. uniprot
Match: A0A6H5LQT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQT4_9PHAE)

HSP 1 Score: 1056 bits (2730), Expect = 0.000e+0
Identity = 660/820 (80.49%), Postives = 692/820 (84.39%), Query Frame = 0
Query:  275 MSASARGLAIRHAVDGCCKNLPATPRYVPGATRLLQQWDRATRHQRDELLTALADQLLVNSDETSCPQQHACSHSGADYESGIRLEKEVRVGYMEQQTAIALRCPFRSEKDVDKNKRRGLPPSTRQVGLPPPTKPKGDGVPGEAIPRPQRPSPQANIDFLGLLGPHASLLATRLSSHLQTSFAYGHELGPCLRVVTLLSESATGGITVQGC--------FDPCLLGQQLCTPGLINTALQVAVSHQKSAANSQILATEAERKVRRRRXRQRGKISPTVPPHSFSPEEGTDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXTNRAKALDLLVALVRAGGKRVKDYISYPYSSPSSLLGLSENSSPI--VGDPLGLIVMELRRPECGSDTREAGRHLLVELGLGGHDSAGIAKVWSAVLCLLDGRDKQDPAGAQILGFRVAQELLVRRLSEQRRRNETLRYRGDNLGSDVLDGALPSPQKDRQRLMCPELTLMPSVLKLSLSPSYEVREAAAGLAVLLATGCPRPCCYLVVAGLAGLLGLVSEVERGAPIAWIQLQRERVTGTRLREETEEDAHSADEESASSSRGSDDTAESDGYDSPDGSPAPSTEEFDRRGAGFGGGEAILVLKLLRRVCTSGRGGNGEEELCLALAYALAPLAVLDLVVCPRNLAADRRPTDTRDAGNAPAGVEADGDAVVERHVTADRGEAGAGGDSDEESGECPRSERQAEAGGFPQKDNGNQLGGGELPSGFTPSDELVGIYAGGSGDVAIGRRFEQPPGE 1084
            MSASARGLAIRHAVDGCCKNLPATP + PGATRLLQQWDRATRHQRDEL+ ALADQLL++++ETSCPQQ AC +SGADYESGI LEKE                                      VGLPPPT+P GDGVPGEAI  PQ PSP+AN++FL LLG HA LLATR SSHLQTSFA GHELGPCLRVVTLL+ESAT G TVQG         FDP L+G Q CTPGLINTALQVAVSHQ SA  SQ+ ATEA+R+VR RR RQRGKI+PTVPP + SPEE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX   NRAKAL LLVALVRAGGKRVKDYI YPY SPSSLL LSENSSPI  VGDPLGLIVM L RPECG+ TREAGRHLLVELGLGGHDS G AKVWSAVLCLLD RD QDPAGAQILGF+VAQELLVR+LSEQR RNETLRYRGDN+GS VLDGALPSPQK+RQRLM PELTLMPSVLKLSLSPSYEVREAAAGLAVLLAT CPRPCCYLVVAGLAGL GLVS VERGAPIAWIQLQRERVTG R RE+T EDAHSADE+S SSSRGSD TAESDGYDS DG PA S+EE +RRGAG GGGEAIL LKLLRRVC SGRGG GEEELC ALAYALAPL VLDLVVCPRNLAAD RPTD RDAGNAPAGVEADGDAV+ER VTA+R EAGAGGDSDE SGE PRSERQAEAGG P K+NGNQLGGGELPSGFTP DEL+G+YAGGSGDVA  RRFEQPPGE
Sbjct:    1 MSASARGLAIRHAVDGCCKNLPATPGHAPGATRLLQQWDRATRHQRDELMKALADQLLISNNETSCPQQQACCYSGADYESGISLEKE--------------------------------------VGLPPPTEPIGDGVPGEAILPPQHPSPRANVEFLSLLGHHAGLLATRFSSHLQTSFACGHELGPCLRVVTLLAESATAGRTVQGSSDDGVQDYFDPRLVGHQFCTPGLINTALQVAVSHQMSAVTSQLSATEADRRVRHRRRRQRGKITPTVPPRALSPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---NRAKALGLLVALVRAGGKRVKDYILYPYPSPSSLLELSENSSPISRVGDPLGLIVMALCRPECGAGTREAGRHLLVELGLGGHDSTGNAKVWSAVLCLLDERDVQDPAGAQILGFQVAQELLVRKLSEQRGRNETLRYRGDNVGSGVLDGALPSPQKNRQRLMRPELTLMPSVLKLSLSPSYEVREAAAGLAVLLATECPRPCCYLVVAGLAGLFGLVSGVERGAPIAWIQLQRERVTGRRSREQTGEDAHSADEQSVSSSRGSDHTAESDGYDSRDGPPASSSEESNRRGAGVGGGEAILALKLLRRVCASGRGGTGEEELCSALAYALAPLTVLDLVVCPRNLAADLRPTDNRDAGNAPAGVEADGDAVIERQVTANREEAGAGGDSDEGSGERPRSERQAEAGGLPLKENGNQLGGGELPSGFTPFDELLGVYAGGSGDVASRRRFEQPPGE 779          
BLAST of mRNA_Ecto-sp13_S_contig1316.2565.1 vs. uniprot
Match: D8LQ07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ07_ECTSI)

HSP 1 Score: 735 bits (1897), Expect = 6.770e-247
Identity = 521/788 (66.12%), Postives = 544/788 (69.04%), Query Frame = 0
Query:  275 MSASARGLAIRHAVDGCCKNLPATPRYVPGATRLLQQWDRATRHQRDELLTALADQLLVNSDETSCPQQHACSHSGADYESGIRLEKEVRVGYMEQQTAIALRCPFRSEKDVDKNKRRGLPPSTRQVGLPPPTKPKGDGVPGEAIPRPQRPSPQANIDFLGLLGPHASLLATRLSSHLQTSFAYGHELGPCLRVVTLLSESATGGITVQGCFDPCLLGQQLCTPGLINTALQVAVSHQKSAANSQILATEAERKVRRRRXRQRGKISPTVPPHSFSPEEGTDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXTNRAKALDLLVALVRAGGKRVKDYISYPYSSPSSLLGLSENSSPI--VGDPLGLIVMELRRPECGSDTREAGRHLLVELGLGGHDSAGIAKVWSAVLCLLDGRDKQDPAGAQILGFRVAQELLVRRLSEQRRRNETLRYRGDNLGSDVLDGALPSPQKDRQRLMCPELTLMPSVLKLSLSPSYEVREAAAGLAVLLATGCPRPCCYLVVAGLAGLLGLVSEVERGAPIAWIQLQRERVTGTRLREETEEDAHSADEESASSSRGSDDTAESDGYDSPDGSPAPSTEEFDRRGAGFGGGEAILVLKLLRRVCTSGRGGNGEEELCLALAYALAPLAVLDLVVCPRNLAADRRPTDTRDAGNAPAGVEADGDAVVERHVTADRGEAGAGGDSDEESGECPRSERQAEAGGFPQKDNGNQLGGGELPSGFTPSDE 1060
            MSASARGLAIRHAVDGCCKNLPATP   PGATRLLQQWDRATRHQ+    +A A + + +S +                                                                          DGV                                                                    Q  FDP LLGQQLCTPGLINTALQVAVSHQKSA NSQ+ ATEA+R+VR+RR RQRGKI+PTVPPHS SPEE  DE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX      TNRA+AL LLVALVRAGGKRVKDY+S P SSPSSLLGLS+NSSPI  VGDPLGLIVM LRRPECG+DTREAGR LLVELGLGGHD  G  KVWSAVLCLLDGRD QDPAG+Q LGFRVAQELLVRR SEQR RN  LRYRGDN+GS VLDGALPSPQK RQRLM PELTL+PSVLKLSLSP YEVRE AAGLAVLLAT CPRPCCYLVVAGLAGL GLVSEVERGAPIAWIQLQRERVTG R RE+T                       +DG DS DGSPAPSTEE DR GAG GGGEAIL LKLLRRVCTSGRGG G EELC ALAYALAPLAVLDLVVCPRNLAAD RPTDTRDAGNAPAGVEADGDAV ER VT  R EAGAGG +DE SGE PRSER AE+GG P KDN N+LGGGELPS F PSDE
Sbjct:    1 MSASARGLAIRHAVDGCCKNLPATPGRAPGATRLLQQWDRATRHQQ----SATAGRTVQDSSD--------------------------------------------------------------------------DGV--------------------------------------------------------------------QDYFDPRLLGQQLCTPGLINTALQVAVSHQKSAVNSQLSATEADRRVRQRRRRQRGKITPTVPPHSLSPEEWKDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------TNRAEALGLLVALVRAGGKRVKDYLSCPSSSPSSLLGLSQNSSPISRVGDPLGLIVMALRRPECGTDTREAGRRLLVELGLGGHDPTGNEKVWSAVLCLLDGRDIQDPAGSQTLGFRVAQELLVRRASEQRGRNGALRYRGDNVGSVVLDGALPSPQKYRQRLMRPELTLIPSVLKLSLSPIYEVREDAAGLAVLLATECPRPCCYLVVAGLAGLFGLVSEVERGAPIAWIQLQRERVTGRRSREQTXXXXXXXXXXXXX-------XXTADGCDSRDGSPAPSTEESDRGGAGVGGGEAILALKLLRRVCTSGRGGTGAEELCSALAYALAPLAVLDLVVCPRNLAADLRPTDTRDAGNAPAGVEADGDAVFERRVTTSREEAGAGGYNDEGSGERPRSERLAESGGLPPKDNDNRLGGGELPSDFAPSDE 629          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1316.2565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LQT4_9PHAE0.000e+080.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ07_ECTSI6.770e-24766.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 555..637
NoneNo IPR availablePANTHERPTHR31780FAMILY NOT NAMEDcoord: 552..886
NoneNo IPR availablePANTHERPTHR31780:SF1STRESS RESPONSE PROTEIN NST1coord: 552..886

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1316contigEcto-sp13_S_contig1316:12273..16814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1316.2565.1mRNA_Ecto-sp13_S_contig1316.2565.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1316 12273..16814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1316.2565.1 ID=prot_Ecto-sp13_S_contig1316.2565.1|Name=mRNA_Ecto-sp13_S_contig1316.2565.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1425bp
ILQSLRVCGVSCKIGSSVRVGCTQYTVRPGRCHTPHMEATGIMPTTSLGK
WGNGNDAASQLGLPACADRELSTITLPTSMGDCHLTRPYKPRREVVTTHV
FTVPPQEAAPVRLWLPKRSSTGQRPHGKARAPAATGCDERAKSAPPHRDK
RGCSPIWRGHPSCSQREASSPTSSRKSRSPAYHTRSTTTTPAKRQRPATS
VLEAEQRLGSEQYWHSSLRGLHTAPPVPTTSRWLSACGEEDGDTVANGGA
GLFIKSEDMNYQRPLGAPVKQPRAMSASARGLAIRHAVDGCCKNLPATPR
YVPGATRLLQQWDRATRHQRDELLTALADQLLVNSDETSCPQQHACSHSG
ADYESGIRLEKEVRVGYMEQQTAIALRCPFRSEKDVDKNKRRGLPPSTRQ
VGLPPPTKPKGDGVPGEAIPRPQRPSPQANIDFLGLLGPHASLLATRLSS
HLQTSFAYGHELGPCLRVVTLLSESATGGITVQGCFDPCLLGQQLCTPGL
INTALQVAVSHQKSAANSQILATEAERKVRRRRRRQRGKISPTVPPHSFS
PEEGTDEDEERDEEKEEEKEEEKGEENEEDKEEREEEEKEDEDEVEAEEE
QEEEEEKELEEKELEEKEEEEEGEEEKEEETNRAKALDLLVALVRAGGKR
VKDYISYPYSSPSSLLGLSENSSPIVGDPLGLIVMELRRPECGSDTREAG
RHLLVELGLGGHDSAGIAKVWSAVLCLLDGRDKQDPAGAQILGFRVAQEL
LVRRLSEQRRRNETLRYRGDNLGSDVLDGALPSPQKDRQRLMCPELTLMP
SVLKLSLSPSYEVREAAAGLAVLLATGCPRPCCYLVVAGLAGLLGLVSEV
ERGAPIAWIQLQRERVTGTRLREETEEDAHSADEESASSSRGSDDTAESD
GYDSPDGSPAPSTEEFDRRGAGFGGGEAILVLKLLRRVCTSGRGGNGEEE
LCLALAYALAPLAVLDLVVCPRNLAADRRPTDTRDAGNAPAGVEADGDAV
VERHVTADRGEAGAGGDSDEESGECPRSERQAEAGGFPQKDNGNQLGGGE
LPSGFTPSDELVGIYAGGSGDVAIGRRFEQPPGEVCLAVADALLAMYAAA
GATNAGHPRSQAEPPQGWPPPSSSTARDKSIGCPCPSRETLGLKGIIEEA
LGGCPILSRSVRDGDSEAMGRVFSQGGSDGDGANSRDKNIVVEFATLRAN
IGMLTKRLGRVRPPPPPPPPPPPAPPSSVPAGNGNSMTERCERPDAPQCD
RLTARVIGRRAEKLLECGQDDSTPSETISDGVSGDSGDDWGPNYGRETNG
SKVGALAPQRWMDLGPNGSTQRTSRMTPRHTTSTELLADKTLGISGRRPQ
HQRRRQRQQSGRPPRVAAGGCESGYGPRVWGPEDWGEDAPTMALLTEAPA
RSSKTPERQEGERPGPIWRAVFGG*
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