prot_Ecto-sp13_S_contig10226.251.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10226.251.1
Unique Nameprot_Ecto-sp13_S_contig10226.251.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length107
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10226.251.1 vs. uniprot
Match: D8LR68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR68_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 3.040e-51
Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:   17 MPQNRLSASPFREGGGEQEAAAKNVGIEVFAHGALGTDALLVASLSNSALLILRIGSDGIRSWLLDWPVAGKIRGMCVSPDLQCVLCATDG 107
            MPQNR SAS FR GGGEQEAAAKNVGIEVFAHGALGTDALLVASLSNSALLILRIGSDGIRSWLLDWPVAGKIRGMCVSPDLQCVLCAT+G
Sbjct:    1 MPQNRFSASSFRGGGGEQEAAAKNVGIEVFAHGALGTDALLVASLSNSALLILRIGSDGIRSWLLDWPVAGKIRGMCVSPDLQCVLCATEG 91
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BLAST of mRNA_Ecto-sp13_S_contig10226.251.1 vs. uniprot
Match: A0A6H5KV72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV72_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 6.260e-48
Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:   17 MPQNRLSASPFREGGGEQEAAAKNVGIEVFAHGALGTDALLVASLSNSALLILRIGSDGIRSWLLDWPVAGKIRGMCVSPDLQCVLCATDG 107
            MPQNR SAS FREGGGEQEAAAKNVGIEVFAHGALGTDALLVASLSNSALLILRIGSD IRSWLLDWPVAGKIRGMCVSPDLQCVLCAT+G
Sbjct:    1 MPQNRFSASSFREGGGEQEAAAKNVGIEVFAHGALGTDALLVASLSNSALLILRIGSDCIRSWLLDWPVAGKIRGMCVSPDLQCVLCATEG 91
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10226.251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR68_ECTSI3.040e-5195.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV72_9PHAE6.260e-4895.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10226contigEcto-sp13_S_contig10226:4468..5913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10226.251.1mRNA_Ecto-sp13_S_contig10226.251.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10226 4468..5914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10226.251.1 ID=prot_Ecto-sp13_S_contig10226.251.1|Name=mRNA_Ecto-sp13_S_contig10226.251.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
RRSSFASSCVGTPIVNMPQNRLSASPFREGGGEQEAAAKNVGIEVFAHGA
LGTDALLVASLSNSALLILRIGSDGIRSWLLDWPVAGKIRGMCVSPDLQC
VLCATDG
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