prot_Ecto-sp13_S_contig13062.2507.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13062.2507.1
Unique Nameprot_Ecto-sp13_S_contig13062.2507.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 7.130e-42
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 0
Query:    2 LPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGVKRCGVSITYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFILQ 85
            LPFILVGIGVDDMFVIVAAYD+TDP LAVEERVALGVKRCGVS+TYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDF LQ
Sbjct:  353 LPFILVGIGVDDMFVIVAAYDHTDPSLAVEERVALGVKRCGVSVTYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFFLQ 436          
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 2.510e-41
Identity = 77/84 (91.67%), Postives = 82/84 (97.62%), Query Frame = 0
Query:    2 LPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGVKRCGVSITYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFILQ 85
            LPFIL+GIGVDDMFVIVAAYD+TDP LAVEER+ALGVKRCGVS+TYTSLTNFFAFLLGS+TSLPAVEYFCLYAATAILFDF LQ
Sbjct:  381 LPFILIGIGVDDMFVIVAAYDHTDPSLAVEERIALGVKRCGVSVTYTSLTNFFAFLLGSMTSLPAVEYFCLYAATAILFDFFLQ 464          
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 5.330e-40
Identity = 74/84 (88.10%), Postives = 81/84 (96.43%), Query Frame = 0
Query:    2 LPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGVKRCGVSITYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFILQ 85
            LPFIL+GIGVDDMFVIVAAYD+TDP LAVEER+ALGVKRCGVS+TYTSLTNFFAF+LGS++SLPAVEYFCLYA TAILFDF LQ
Sbjct:  330 LPFILIGIGVDDMFVIVAAYDHTDPSLAVEERIALGVKRCGVSVTYTSLTNFFAFMLGSMSSLPAVEYFCLYAGTAILFDFFLQ 413          
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.960e-37
Identity = 72/84 (85.71%), Postives = 79/84 (94.05%), Query Frame = 0
Query:    2 LPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGVKRCGVSITYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFILQ 85
            LPFIL+GIGVDDMFVIVAAYD+TD  L VEERVALGVKRCG+S+TYTSLTNFFAFLLG+ +SLPAV+YFCLYAATAILFDF LQ
Sbjct:  233 LPFILIGIGVDDMFVIVAAYDHTDRALPVEERVALGVKRCGLSVTYTSLTNFFAFLLGAQSSLPAVQYFCLYAATAILFDFFLQ 316          
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: A0A7S2WB13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB13_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.890e-24
Identity = 50/84 (59.52%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    2 LPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGVKRCGVSITYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFILQ 85
            LPFI+VGIGVDD+ +IV+A+D+TD  L+ E R++L ++RCGVSITYT+LT+  AF LG+ ++LPA++ FC+YAA AILF+F+ Q
Sbjct:  350 LPFIIVGIGVDDLLIIVSAFDSTDERLSSENRLSLALRRCGVSITYTTLTDVSAFFLGATSALPAIQAFCIYAAFAILFNFLFQ 433          
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: A0A6H5JGQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ4_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.220e-24
Identity = 56/79 (70.89%), Postives = 62/79 (78.48%), Query Frame = 0
Query:   17 IVAAYDNTDPLLAVEERVALGVKRCGVSIT-----------YTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFIL 84
            IVAAYD+TDP L +EERVA GVKRCGVS+T           YTSLTNFFAF+LG ++SLPAVEYFCLYA TAILFDF L
Sbjct:   14 IVAAYDHTDPSLTMEERVAFGVKRCGVSVTALRRSATYLSEYTSLTNFFAFMLGRVSSLPAVEYFCLYAGTAILFDFFL 92          
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: K8EQV0_9CHLO (RND family transporter: Niemann-Pick type C1 disease protein-like protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EQV0_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 3.110e-23
Identity = 50/84 (59.52%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    2 LPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGVKRCGVSITYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFILQ 85
            LPF+L+GIGVDDMFV+V AYDNT+P L++ ER+   +   G+SIT TS T+ FAFL+GS TSLPA+  FC YAA  I FD++ Q
Sbjct:  442 LPFLLLGIGVDDMFVLVNAYDNTNPYLSIAERLGNAMSTAGMSITVTSFTDIFAFLIGSTTSLPALRNFCFYAALGIFFDYLYQ 525          
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: A0A835YJJ3_9STRA (Patched family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJJ3_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.750e-22
Identity = 45/84 (53.57%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    2 LPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGVKRCGVSITYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFILQ 85
            LPF+L+GIG+DD F++  A D  +P L   ER+A  + RCG+S+ YTS+ NF  F+LG+ ++LPA+EYFC+YA  A+LFDF+LQ
Sbjct:  375 LPFLLIGIGLDDAFIMAGALDLVNPDLPTAERIAEAMGRCGLSVFYTSIINFMVFMLGANSTLPAIEYFCIYAGVAVLFDFLLQ 458          
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 5.100e-22
Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    2 LPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGVKRCGVSITYTSLTNFFAFLLGSLTSLPAVEYF 70
            LPFILVGIGVDDM VIV+++D+TDP L VE R+A  +KRCGVSITYTS+TN  AF+LGS TSLPAV  F
Sbjct:  346 LPFILVGIGVDDMIVIVSSFDHTDPALPVERRIADALKRCGVSITYTSMTNVAAFMLGSTTSLPAVTAF 414          
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Match: A0A2B4SNT0_STYPI (Patched domain-containing protein 3 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SNT0_STYPI)

HSP 1 Score: 93.6 bits (231), Expect = 2.140e-20
Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    2 LPFILVGIGVDDMFVIVAAYDNTDPLL----AVEERVALGVKRCGVSITYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFILQ 85
            LPF+L+GIGVDDMFVIV A+ N  P L    ++ ER+ L +K  G SIT T+LT+F AFL+GS T LPA+  FC+YAA  +L DFILQ
Sbjct:  345 LPFLLLGIGVDDMFVIVQAWSNLAPELCQTQSIAERLGLALKHAGCSITITTLTDFLAFLIGSTTILPALRSFCIYAAIGVLADFILQ 432          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13062.2507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY89_ECTSI7.130e-4295.24Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
D7FY95_ECTSI2.510e-4191.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FY98_ECTSI5.330e-4088.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCK4_ECTSI1.960e-3785.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2WB13_9STRA1.890e-2459.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5JGQ4_9PHAE2.220e-2470.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
K8EQV0_9CHLO3.110e-2359.52RND family transporter: Niemann-Pick type C1 disea... [more]
A0A835YJJ3_9STRA2.750e-2253.57Patched family-domain-containing protein n=1 Tax=T... [more]
D8LCK9_ECTSI5.100e-2272.46Similar to Patched domain-containing protein 3, pa... [more]
A0A2B4SNT0_STYPI2.140e-2057.95Patched domain-containing protein 3 n=1 Tax=Stylop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000731Sterol-sensing domainPFAMPF12349Sterol-sensingcoord: 1..85
e-value: 3.3E-28
score: 98.5
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 1..85
score: 29.064
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 2..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..65
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 2..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13062contigEcto-sp13_S_contig13062:1768..2830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13062.2507.1mRNA_Ecto-sp13_S_contig13062.2507.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13062 1741..2830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13062.2507.1 ID=prot_Ecto-sp13_S_contig13062.2507.1|Name=mRNA_Ecto-sp13_S_contig13062.2507.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MLPFILVGIGVDDMFVIVAAYDNTDPLLAVEERVALGVKRCGVSITYTSL
TNFFAFLLGSLTSLPAVEYFCLYAATAILFDFILQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000731SSD