prot_Ecto-sp13_S_contig1305.2502.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1305.2502.1
Unique Nameprot_Ecto-sp13_S_contig1305.2502.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length376
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1305.2502.1 vs. uniprot
Match: D8LJ78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ78_ECTSI)

HSP 1 Score: 525 bits (1352), Expect = 1.480e-183
Identity = 293/340 (86.18%), Postives = 301/340 (88.53%), Query Frame = 0 
Query:   38 MEAGACSNPEDVQPATKKAAQKLTNFRGYLHKSSVAGCFVDLLEMTNEGVMTEAGLYPSSRYKQSRNMRQSGLGSSSRSRPPTGLNGPNKNDKSQAPLQGPSNDQVEDQSKNQRQHRGHHRRRPSTALGTPSAPLAAQATRDAPLSARVGLSAGNSFAEAAGARILSASSP-CHNNNKSEDIAGSRATTLDIRRTQWVEGDSKQGVGGWLETDTAGQSQQHQGQREGAVSATGPETDDDAEEGEXXXXXXXXXXXXXXXXXXXXCNTXXXXXXSTADSPKPFSRRVAWGKAMRELSSSVTKVAHMKSAADRAMINSSHERRARAASVRAGLIEGELLRAQ 376
            MEAGACSNPEDVQPATKKAAQKLTNFRGYLHKSSVAGCFVDLL+MT+EGVMTEAGLYPSSRYKQSRNMRQSGLG+SSRSRPPTGLNGPNKNDKSQAPLQGPSN+Q EDQ KNQRQ RGHH RRPSTAL T SAPLAAQ TRDAPLSARVGLSAGNSFAEAAG+RILSASSP CHNNNKSEDIAGSRAT LDIRRTQWVEG SKQGVGGWLE DTAGQSQQHQGQ  GAVSATGPET+DDAEEGE                    CNT      STADSPKPFSRRVAWGKAMRELSSSVTKVAHMK+AADRAMINSSH+RRARAASVRAGLIEGELLRAQ
Sbjct:    1 MEAGACSNPEDVQPATKKAAQKLTNFRGYLHKSSVAGCFVDLLQMTDEGVMTEAGLYPSSRYKQSRNMRQSGLGTSSRSRPPTGLNGPNKNDKSQAPLQGPSNNQAEDQRKNQRQPRGHHGRRPSTALETHSAPLAAQLTRDAPLSARVGLSAGNSFAEAAGSRILSASSPSCHNNNKSEDIAGSRATILDIRRTQWVEGGSKQGVGGWLEADTAGQSQQHQGQLVGAVSATGPETNDDAEEGEKEGRNGGGHDENGGDHPGGRCNTSSTTSTSTADSPKPFSRRVAWGKAMRELSSSVTKVAHMKTAADRAMINSSHDRRARAASVRAGLIEGELLRAQ 340
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BLAST of mRNA_Ecto-sp13_S_contig1305.2502.1 vs. uniprot
Match: A0A6H5JK95_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK95_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 1.040e-155
Identity = 287/347 (82.71%), Postives = 294/347 (84.73%), Query Frame = 0 
Query:   32 MKRFQSMEAGACSNPEDVQPATKKAAQKLTNFRGYLHKSSVAGCFVDLLEMTNEGVMTEAGLYPSSRYKQSRNMRQSGLGSSSRSR--PPTGLNGPNKNDKSQAPLQGPSNDQVEDQSKNQRQHRGHHRRRPSTALGTPSAPLAAQATRDAPLSARVGLSAGNSFAEAAGARILSASSPCHNNNKSEDIAGSRATTLDIRRTQWVEGDSKQGVGGWLETDTAGQSQQHQGQREGAVSATGPETDDDAEEGEXXXXXXXXXXXXXXXXXXXXCNTXXXXXXSTADSPKPFSRRVAWGKAMRELSSSVTKVAHMKSAADRAMINSSHERRARAASVRAGLIEGELLRAQ 376
            MKRFQSMEAGACSNPEDVQPATKKAAQKL NFRG                 T  GVMTEAGLYPSSRYKQSRNMRQSGLGSSSRSR  PPT LNG  KNDKSQAPLQGPSN+QV DQSKNQRQ RGHH RRPSTAL TPSAPLAAQ TRDAPLSARVGLSAGNSFAEAAGAR L ASSP  +NNKSEDIAGSRAT LDIRRTQWVEG+SKQGVGGWLE DTAG+SQQHQGQR GAVSATGPET+D AEEG+      XXXXXXXXXXXX  C T      STADSPKPFSRRVAWGKAMRELSSSVTKVAHMK+AADRAMINSSHERRARAASVRAGLIEGELLRAQ
Sbjct:    1 MKRFQSMEAGACSNPEDVQPATKKAAQKLANFRG--------------CSSTASGVMTEAGLYPSSRYKQSRNMRQSGLGSSSRSRSRPPTRLNGRRKNDKSQAPLQGPSNNQVGDQSKNQRQQRGHHGRRPSTALETPSAPLAAQPTRDAPLSARVGLSAGNSFAEAAGARTLGASSPTCDNNKSEDIAGSRATILDIRRTQWVEGESKQGVGGWLEADTAGRSQQHQGQRVGAVSATGPETNDGAEEGDKEGRNGXXXXXXXXXXXXGRCKTSSTTSTSTADSPKPFSRRVAWGKAMRELSSSVTKVAHMKTAADRAMINSSHERRARAASVRAGLIEGELLRAQ 333
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1305.2502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ78_ECTSI1.480e-18386.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK95_9PHAE1.040e-15582.71Reverse transcriptase domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1305contigEcto-sp13_S_contig1305:387..4236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1305.2502.1mRNA_Ecto-sp13_S_contig1305.2502.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1305 387..4236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1305.2502.1 ID=prot_Ecto-sp13_S_contig1305.2502.1|Name=mRNA_Ecto-sp13_S_contig1305.2502.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=376bp
MAGGPTPPQSPARNGNKMSGAVSSSPRVRLTMKRFQSMEAGACSNPEDVQ
PATKKAAQKLTNFRGYLHKSSVAGCFVDLLEMTNEGVMTEAGLYPSSRYK
QSRNMRQSGLGSSSRSRPPTGLNGPNKNDKSQAPLQGPSNDQVEDQSKNQ
RQHRGHHRRRPSTALGTPSAPLAAQATRDAPLSARVGLSAGNSFAEAAGA
RILSASSPCHNNNKSEDIAGSRATTLDIRRTQWVEGDSKQGVGGWLETDT
AGQSQQHQGQREGAVSATGPETDDDAEEGEKEGRNGGGDDGSGGDHAGGR
CNTSSTTSTSTADSPKPFSRRVAWGKAMRELSSSVTKVAHMKSAADRAMI
NSSHERRARAASVRAGLIEGELLRAQ
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