mRNA_Ecto-sp13_S_contig13001.2469.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: D7FXM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM3_ECTSI) HSP 1 Score: 477 bits (1228), Expect = 1.730e-165 Identity = 249/269 (92.57%), Postives = 255/269 (94.80%), Query Frame = 1
Query: 1 KAPLEALVGELKASAAESRGEDETGLRSSTSS-SLLTSLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACVSSLRGGGAHSDDTAFESFWFPRRAALCDNISTGSDYSAKDFQEAEGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEINRALLGAGDGRSNGDHDKPSTTPSGVSVRFLDWTDYCRHNASSV 804
+APLEALVGELKASAAESRGEDETGLRSSTSS S TSLGFQERVA ELLDCPIAAEF PRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACVSSLRGGG HSDDTAFESFWFPRRAALCD ISTGSDYSAK FQE EGG FFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAA+CGAAEVVLTDYAPRVLANLHHN+EINRALL AG G+SNG++DKPSTTPSGVSVRFLDWTDYC H ASSV
Sbjct: 14 QAPLEALVGELKASAAESRGEDETGLRSSTSSLSSWTSLGFQERVATELLDCPIAAEFTPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACVSSLRGGGGHSDDTAFESFWFPRRAALCDIISTGSDYSAKGFQEEEGGTFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAATCGAAEVVLTDYAPRVLANLHHNLEINRALLEAGAGQSNGNNDKPSTTPSGVSVRFLDWTDYCHHKASSV 282
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: A0A6H5L2S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S8_9PHAE) HSP 1 Score: 235 bits (599), Expect = 5.000e-75 Identity = 131/156 (83.97%), Postives = 134/156 (85.90%), Query Frame = 1
Query: 1 KAPLEALVGELKASAAESRGEDETGLRSSTSSSLLTSLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACVSSLRGGGAHSDDTAFESFWFPRRAALCDNISTGSDYSAKDFQEAEGGAFFSFRVANRDNEVG 468
+APL+ALVGELKASAAESR EDETGL SS SSL TSLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMA D+TAFESFWFPRRAALCD STGSD SAK FQE EGGAFFSFRVANRDNEVG
Sbjct: 14 QAPLDALVGELKASAAESRREDETGLPSS--SSLWTSLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMA------------DETAFESFWFPRRAALCDGFSTGSDCSAKGFQEEEGGAFFSFRVANRDNEVG 155
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: A0A6H5JKR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKR7_9PHAE) HSP 1 Score: 202 bits (514), Expect = 4.160e-60 Identity = 101/107 (94.39%), Postives = 103/107 (96.26%), Query Frame = 1
Query: 496 LAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEINRALLGAGDGRSNGDHDKPSTTPSGVSVRFLDWTDYCRHNASSVPSAG 816
+ EFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEINRALLGAGDGRSNGD+DKPSTTP GVSVRFLDWTDYCRHNASSV AG
Sbjct: 1 MGEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEINRALLGAGDGRSNGDNDKPSTTPWGVSVRFLDWTDYCRHNASSVSPAG 107
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: A0A485LAD7_9STRA (Aste57867_18213 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAD7_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.430e-26 Identity = 79/229 (34.50%), Postives = 120/229 (52.40%), Query Frame = 1
Query: 106 TSLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMA--CVSSLRGGGAHSDDTAFESFWFPRRA-ALCDNISTGSDYSAKDFQEAEGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCG-AAEVVLTDYAPRVLANLHHNVEINRALLGAGDGRSNGDHDKPSTTPSGVSVRFLDWTDY 780
T+L FQ+ +++ I ++ P+ Y R+ K+ ++ VE AG+E ++ LL +A C ++ G A D+ S+ PR + D++ T RVA NEVG+++WEAG LAE+ L+H + +GKR+LELGAG G TG+ +AA AA V+LTDYAP V+ NL +N+E+N L T P V+ LDWT++
Sbjct: 36 TTLEFQDLFMTQVVQNTICDDYAPKRSYTFRILKLYVQDVENAGEELSDLLLADVLASVCHKNVSLGSADLDELHHVSYRIPRAGPVVVDDVIT-------------------CRVAAAHNEVGMKLWEAGFFLAEYALSHPHVFQGKRILELGAGAGFTGLVIAAMPSVAAHVMLTDYAPVVMQNLRYNIEVNAPRL---------------TCP--VTAMALDWTEW 228
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: A0A6G0WMZ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMZ3_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.360e-26 Identity = 75/195 (38.46%), Postives = 107/195 (54.87%), Query Frame = 1
Query: 112 LGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACVSSLRGGGAHSDDTAFESFWFPRRAA--LCDNISTGSDYSAKDFQEAEGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAAS-CGAAEVVLTDYAPRVLANLHHNVEINRALL 687
L FQ+ A++L +A ++ PR Y R+ K +E +ET DE ++ L+ +A VSS + + S+ PR + D++ T RVA NEVG+++WEAG LAE+ + + + RGKRV+ELGAG G TG+ +AA C AAEVVLTDYAP V+ NL +N+EIN L
Sbjct: 35 LDFQDAFVAQVLRNTVAEDYAPRQSYTFRLLKRFVEEIETHSDEISDALVEEMLAFVSS-KNAETDLEQLHHVSYRIPRPSPSKAVDDVIT-------------------CRVAAAHNEVGMKLWEAGFFLAEYAIVYPEVFRGKRVVELGAGAGFTGLVLAAQPCVAAEVVLTDYAPIVMQNLRYNIEINTHRL 209
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: A0A329SVC4_9STRA (FAM86 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SVC4_9STRA) HSP 1 Score: 114 bits (285), Expect = 4.370e-26 Identity = 72/192 (37.50%), Postives = 103/192 (53.65%), Query Frame = 1
Query: 106 TSLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACV--SSLRGGGAHSDDTAFESFWFPRRAALCDNISTGSDYSAKDFQEAEGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEIN 675
TSL FQ +V +++ P+ +F P +Y R K + +E + +GL+ A M V S L +S+ S+ P A+ + RVA+ NEVGL++WEAG LAE+ +AH RG++VLELGAG+G TGMA+A C ++ VVLTDYAP V+ NL +NVE+N
Sbjct: 36 TSLEFQTQVLQVVVNDPVCDDFAPLRKYTYRFLKSFVNEIEVVHADVDDGLVEALMEFVLNSKLVDDALNSEAMHHVSYTVPT---------------------ADSSVVVTCRVASVFNEVGLKLWEAGWLLAEYIIAHESEFRGRKVLELGAGVGFTGMALACVCRSSRVVLTDYAPNVMQNLRYNVEVN 206
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: A0A024TMK6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMK6_9STRA) HSP 1 Score: 114 bits (284), Expect = 5.300e-26 Identity = 73/203 (35.96%), Postives = 113/203 (55.67%), Query Frame = 1
Query: 88 TSSSLLTSLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACVS--SLRGGGAHSDDTAFESFWFPRRAALCDNISTGSDYSAKDFQEAEGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAE-VVLTDYAPRVLANLHHNVEINRALL 687
TS S LT + FQ+R A ++ IA ++PP+ Y R+ K+ ++ VE G + ++ L+ + VS ++ G ++ ++ PR + N G + + RVA NEVG+++WEAG LAEF L+H RG+RV+ELGAG+G TG+ +A+ A VVLTDYAP V+ NL +N+E+N + L
Sbjct: 27 TSPSYLT-VDFQDRFMAHVIQDSIADDYPPKQSYTFRLLKIYIQEVERHGGDVSDALMEGILPSVSHKNISIGTMDLEELHHVTYRIPRSSHDAPN----------------GDSIITCRVAAAHNEVGMKLWEAGFFLAEFVLSHPDFFRGQRVMELGAGVGFTGLVLASLPSVASAVVLTDYAPVVMQNLRYNIEVNASRL 212
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: W4GAL5_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAL5_9STRA) HSP 1 Score: 113 bits (283), Expect = 9.330e-26 Identity = 72/198 (36.36%), Postives = 115/198 (58.08%), Query Frame = 1
Query: 94 SSLLTSLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLL--LARMACVSSLRGGGAHSDDTAFESFWFPR-RAALCDNISTGSDYSAKDFQEAEGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCG-AAEVVLTDYAPRVLANLHHNVEIN 675
SS LT L FQ+R ++ PIA +FPP+ Y R+ ++ ++ +E GD+ ++ L+ + C + G D+ ++ P R D + + + K+ + + RVA NEVG+++WEAG LAE+ L+H+ + RG+RV+ELGAG+G TG+ +A+ AA VVLTDYAP V+ NL +N+E+N
Sbjct: 32 SSYLT-LEFQDRFMQFVIQDPIADDFPPKQSYTFRLLRLYIQEIERQGDDVSDVLMEEILPNVCHKNASIGAIDLDELHHVTYRIPHPRGGSVDWTNDAAVHDRKN-------SVITCRVAAAHNEVGMKLWEAGFFLAEYVLSHTDVFRGQRVMELGAGVGFTGLVLASLPSVAAAVVLTDYAPVVMQNLRYNIEVN 221
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: H3HC78_PHYRM (FAM86 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HC78_PHYRM) HSP 1 Score: 108 bits (271), Expect = 1.020e-24 Identity = 70/188 (37.23%), Postives = 103/188 (54.79%), Query Frame = 1
Query: 112 LGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACVSSLRGGGAHSDDTAFESFWFPRRAALCDNISTGSDYSAKDFQEAEGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEIN 675
L FQ +V +++ P+ +FPP+ +Y R K L+ +E + +GL+ A M V + + +DD+ A ++S Y+ + S RVA+ NEVGL++WEAG LAE+ +AH R + VLELGAG+G TGM +A C + +VLTDYAP V+ NL +NVEIN
Sbjct: 37 LEFQAQVMHVVVNDPVCDDFPPQRKYTYRFLKRYLDEIEAVQADADDGLVEALMEFVLNAK----LADDSL--------NAEAMHHVS----YTVP---TTDSSVVVSCRVASVFNEVGLKLWEAGWLLAEYIIAHESEFRDRTVLELGAGVGFTGMVLACVCRSDRIVLTDYAPNVMQNLRYNVEIN 205
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Match: G4YEA5_PHYSP (FAM86 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YEA5_PHYSP) HSP 1 Score: 108 bits (269), Expect = 8.200e-24 Identity = 67/191 (35.08%), Postives = 101/191 (52.88%), Query Frame = 1
Query: 109 SLGFQERVAAELLDCPIAAEFPPRLEYVSRVTKVLLEAVETAGDEPAEGLLLARMACV--SSLRGGGAHSDDTAFESFWFPRRAALCDNISTGSDYSAKDFQEAEGGAFFSFRVANRDNEVGLRVWEAGRALAEFCLAHSGLLRGKRVLELGAGIGMTGMAVAASCGAAEVVLTDYAPRVLANLHHNVEIN 675
SL Q +V +++ P+ +F P+ +Y R K ++ +E + +GL+ A M V + L +S+ S+ P A+ + RVA+ NEVGL++WEAG LAE+ +AH R ++VLELGAG+G TGM +A C ++ +VLTDYAP V+ NL +NVEIN
Sbjct: 36 SLDLQAQVMQTVVNDPVCDDFAPQRKYTYRFLKSYVDEIEAVSADVDDGLVEALMEFVLNAKLADESLNSEAMHHVSYTVPT---------------------ADSSVVVTCRVASVFNEVGLKLWEAGWLLAEYAIAHESDFRDRKVLELGAGVGFTGMVLACVCRSSRIVLTDYAPNVMQNLRYNVEIN 205 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13001.2469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13001.2469.1 >prot_Ecto-sp13_S_contig13001.2469.1 ID=prot_Ecto-sp13_S_contig13001.2469.1|Name=mRNA_Ecto-sp13_S_contig13001.2469.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=276bp KAPLEALVGELKASAAESRGEDETGLRSSTSSSLLTSLGFQERVAAELLDback to top mRNA from alignment at Ecto-sp13_S_contig13001:1813..4860+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13001.2469.1 ID=mRNA_Ecto-sp13_S_contig13001.2469.1|Name=mRNA_Ecto-sp13_S_contig13001.2469.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3048bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13001:1813..4860+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13001:1813..4860+ >mRNA_Ecto-sp13_S_contig13001.2469.1 ID=mRNA_Ecto-sp13_S_contig13001.2469.1|Name=mRNA_Ecto-sp13_S_contig13001.2469.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=828bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13001:1813..4860+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |