|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig13.2457.1 vs. uniprot
Match: D7FWR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR7_ECTSI) HSP 1 Score: 1796 bits (4652), Expect = 0.000e+0 Identity = 1014/1207 (84.01%), Postives = 1054/1207 (87.32%), Query Frame = 1
Query: 1 HGTTLLKLLIQPHSASFRPHAVQNTRSWSNIAQAFTDKKRIRPASAPTIKREEHQTQPSVDAGSSRGRAETARARLADGTTRRDGPMSFQRAEEIQEVIDILQHTMVARLRGKPKKGERKKAAEAAKRAGSAPGTSVVDRRSHGYAPRVASPCGSVSATSSRGDDADRXXXXXXXXXXXXXXXXXPSTAWHHRELPARCPPAIPAGMAHGSKARPQTAAVMASPFSKSKRSLAEDLESLRRPSDLIGDDSRKADADGKLGMTRARIYSFGASTQGGGGHEDDVLRATAIDAARRSRLPRRCSSAGSAPRDLRPAVPGRREIGRDSVRDDEDGGGGSAAGGYGGVKGRHGNASCRAGVGSVHEDSTESSEHLGVVDISKEDDLSWL---FLSSFSRQLTTVLSHAEVSGYIRTTGGKRSSFTSGSKLNGSGGGGASMSAIRGSPFLADGIANRGTSPSALLDNEGGSGNDEEAPTVPETSSWSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRSDRGREVGTKTIPGTAETEGVMPTRSTPPQLDCLRGRYARADRKSKSAYAIKKAAAVTAAGAAGASTTAPQTPHSLISATRCDKRGLFDRSGKRDRGGTGAXXXXXXXARGPASWRDRLAAVQRRRAVLDDLRRSEATRLVEARAKAEARVPDNASVAASVSLRGARRFTTLEGGAGDNSNSAKKKNSNMIISSNSNKSAPDSASHRAVQAAVTVQRAFRSTLQYEAWLGDQSDRDYLSQVTLRDSDGKRDEPEPSHHHSLALKRSPSSTGGADSIISRLNTVRSDEWAAHRAKKLHDRHVTIRLKRMVRGFICCTQARFLLLQLLWDRTEGNILGERRSKRAAVESRAASTVQQLSHIRKIAVGLIKIQNSAEAFKLEQQARQAKRYPKTLAKPSGDKHAGRHQGGGGGRVFDTAKQARSEKAECEAILREHGRRGRRLVDIAVRDRFLRDLLYSHRRQHIIRDQREYLMETSRPPLVDSRDVKRMLECPAEEMHMFSDPKNYRTRPRYTRLSLPFREIGGIIQETIASNVRSEYRDKLKEALGTTDARESGIHQQEPYPSPTDAVAEEINTGWVHKDATATSAQQLRQQQQAPTAEHAHKNSIKTRASVNFHTGAAATTAPPHQQHAAVGVLAAGHKPTPAVLAPQTATAVAAAASCSAVEGRAWRSGRDGAAMAVPTTAAKAAAA 3612
HGTTLLKLL PHS SFRPHAVQ TRSWSNIAQAFT+KKRIRPASAP IK +EHQTQPSVD+GSSRGRAETARARL DGTTRRDGPMSFQRAEEIQEV+D+LQHTM+ARLRG+PKKGERKKAAEAAKRAGSAPGTSVVDRRSHG+APRVASP GS ATSSRG ADR PSTAW+HRELPARCPPAIP GM HG KARP+TAAV+AS FSKSKRSLAEDL LR LIGD+S K D DGKLGMTRARIYSFGASTQGGGGHE+D+LRATAIDAARRSRLPRRCSSAGSAPRDLRPAVPGRRE G DSVRDD+DGGGGSAAG YGGVKGR+GNASCRAG SVHEDST+SSEHLGVVDISK DDLSWL FLS FSRQLTTVLSHAEVSGYIR TGGK SSFTSGSKL G GGG ASMSAIRGSP LADGIAN+GTSP+ALLDN XXXXXXXXXXXXXX RGRSDRGREVGT+T+ GTAE EGVMPT S PPQLDCLRGRYARAD KSKSAYAIKKAAA TA GAAGASTTAPQTPH L SATRC+KRGLFDRSG RDRGG G XXXXXXXAR PASWRDR AAVQRRRAVLDDLRR+EATR V+ARAKAEARVP+NASVAASVS+RGA+RFTTL+GGAG+N N+ +K SNKSAP+ AS+R VQAAVTVQRAFRSTLQYEAWLGDQSDRDYLSQVTLRD DGKRDEPEPSHH S ALKRSPSS GGADSIISRLNTVRSDEWAAHRAKKLHDRHVTIRLKRMVRGFICCTQARFLLLQLLWDRTEGNILGERRSKRAAVESRAASTVQQLSHIRK+AVGLIKIQNSAEAFKLEQQARQAKR PK AKPSGDKH GRHQGGGGGRVFDTAKQARSEKAECEAILREHGRRGRRLVDIAVRDRFLRDLLYSHRRQHIIRDQREYLMETSRPPLVDSRDVKRMLECPAEEMHMFSDP NYRTRPRYTRL+LPFREIGGIIQ+TIASNVRSEYRDKLKEALG TDARESGIHQQEPY SP A AE+ NTGWVHKDATA +AQQ RQQQQAPTAEHAHKNS KTRASVNF TGAAATT PPHQQ AAVG+LAAGHKPTPAVLAPQTATAVAAAAS SAV+GRAWRSGRDGAAMAVP AKA AA
Sbjct: 6 HGTTLLKLLHHPHSVSFRPHAVQKTRSWSNIAQAFTEKKRIRPASAPAIKHKEHQTQPSVDSGSSRGRAETARARLTDGTTRRDGPMSFQRAEEIQEVVDVLQHTMMARLRGRPKKGERKKAAEAAKRAGSAPGTSVVDRRSHGHAPRVASPRGSAPATSSRGAGADRRRAASGASGEQRRRRPRPSTAWNHRELPARCPPAIPTGMEHGLKARPKTAAVIASSFSKSKRSLAEDLGPLRWSPGLIGDESHKTDTDGKLGMTRARIYSFGASTQGGGGHEEDMLRATAIDAARRSRLPRRCSSAGSAPRDLRPAVPGRRETGEDSVRDDKDGGGGSAAGXYGGVKGRYGNASCRAGADSVHEDSTDSSEHLGVVDISKGDDLSWLLMFFLSPFSRQLTTVLSHAEVSGYIRATGGKHSSFTSGSKLKGGGGGVASMSAIRGSPLLADGIANKGTSPAALLDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEQRESADRSGSDTRTETRGRSDRGREVGTRTVAGTAENEGVMPTGSAPPQLDCLRGRYARADCKSKSAYAIKKAAAATAVGAAGASTTAPQTPHVLTSATRCNKRGLFDRSGARDRGGRGXXXXXXXXARDPASWRDRFAAVQRRRAVLDDLRRTEATRQVKARAKAEARVPNNASVAASVSVRGAKRFTTLDGGAGNNGNATEKNXXXXXXXXXSNKSAPNPASYRTVQAAVTVQRAFRSTLQYEAWLGDQSDRDYLSQVTLRDGDGKRDEPEPSHHQSSALKRSPSSAGGADSIISRLNTVRSDEWAAHRAKKLHDRHVTIRLKRMVRGFICCTQARFLLLQLLWDRTEGNILGERRSKRAAVESRAASTVQQLSHIRKLAVGLIKIQNSAEAFKLEQQARQAKRNPKKTAKPSGDKHGGRHQGGGGGRVFDTAKQARSEKAECEAILREHGRRGRRLVDIAVRDRFLRDLLYSHRRQHIIRDQREYLMETSRPPLVDSRDVKRMLECPAEEMHMFSDPMNYRTRPRYTRLALPFREIGGIIQDTIASNVRSEYRDKLKEALGPTDARESGIHQQEPYSSPAGAFAEDTNTGWVHKDATAAAAQQPRQQQQAPTAEHAHKNSNKTRASVNFDTGAAATTTPPHQQRAAVGMLAAGHKPTPAVLAPQTATAVAAAASRSAVQGRAWRSGRDGAAMAVPMMTAKATAA 1212
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 3615 |
| Hectar predicted targeting category | other localisation |
| Exons | 13 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-21_004310.1 |
| Cds size | 3615 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462695.7797794-CDS-Ecto-sp13_S_contig13:37021..37513 | 1681462695.7797794-CDS-Ecto-sp13_S_contig13:37021..37513 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 37022..37513 - |
| 1681462695.8000352-CDS-Ecto-sp13_S_contig13:38133..38295 | 1681462695.8000352-CDS-Ecto-sp13_S_contig13:38133..38295 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 38134..38295 - |
| 1681462695.813208-CDS-Ecto-sp13_S_contig13:39059..39179 | 1681462695.813208-CDS-Ecto-sp13_S_contig13:39059..39179 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 39060..39179 - |
| 1681462695.8247957-CDS-Ecto-sp13_S_contig13:40079..40268 | 1681462695.8247957-CDS-Ecto-sp13_S_contig13:40079..40268 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 40080..40268 - |
| 1681462695.8341205-CDS-Ecto-sp13_S_contig13:40752..40905 | 1681462695.8341205-CDS-Ecto-sp13_S_contig13:40752..40905 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 40753..40905 - |
| 1681462695.8457303-CDS-Ecto-sp13_S_contig13:41146..41318 | 1681462695.8457303-CDS-Ecto-sp13_S_contig13:41146..41318 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 41147..41318 - |
| 1681462695.8567476-CDS-Ecto-sp13_S_contig13:41936..42043 | 1681462695.8567476-CDS-Ecto-sp13_S_contig13:41936..42043 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 41937..42043 - |
| 1681462695.8673182-CDS-Ecto-sp13_S_contig13:42283..42511 | 1681462695.8673182-CDS-Ecto-sp13_S_contig13:42283..42511 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 42284..42511 - |
| 1681462695.8753893-CDS-Ecto-sp13_S_contig13:43173..43507 | 1681462695.8753893-CDS-Ecto-sp13_S_contig13:43173..43507 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 43174..43507 - |
| 1681462695.8828037-CDS-Ecto-sp13_S_contig13:43892..44416 | 1681462695.8828037-CDS-Ecto-sp13_S_contig13:43892..44416 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 43893..44416 - |
| 1681462695.8926687-CDS-Ecto-sp13_S_contig13:44778..45276 | 1681462695.8926687-CDS-Ecto-sp13_S_contig13:44778..45276 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 44779..45276 - |
| 1681462695.9034777-CDS-Ecto-sp13_S_contig13:45592..45907 | 1681462695.9034777-CDS-Ecto-sp13_S_contig13:45592..45907 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 45593..45907 - |
| 1681462695.9178216-CDS-Ecto-sp13_S_contig13:46872..47193 | 1681462695.9178216-CDS-Ecto-sp13_S_contig13:46872..47193 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig13 46873..47193 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13.2457.1 >prot_Ecto-sp13_S_contig13.2457.1 ID=prot_Ecto-sp13_S_contig13.2457.1|Name=mRNA_Ecto-sp13_S_contig13.2457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1205bp
HGTTLLKLLIQPHSASFRPHAVQNTRSWSNIAQAFTDKKRIRPASAPTIK
REEHQTQPSVDAGSSRGRAETARARLADGTTRRDGPMSFQRAEEIQEVID
ILQHTMVARLRGKPKKGERKKAAEAAKRAGSAPGTSVVDRRSHGYAPRVA
SPCGSVSATSSRGDDADRRRSASGAGGEQRRRQRRPSTAWHHRELPARCP
PAIPAGMAHGSKARPQTAAVMASPFSKSKRSLAEDLESLRRPSDLIGDDS
RKADADGKLGMTRARIYSFGASTQGGGGHEDDVLRATAIDAARRSRLPRR
CSSAGSAPRDLRPAVPGRREIGRDSVRDDEDGGGGSAAGGYGGVKGRHGN
ASCRAGVGSVHEDSTESSEHLGVVDISKEDDLSWLFLSSFSRQLTTVLSH
AEVSGYIRTTGGKRSSFTSGSKLNGSGGGGASMSAIRGSPFLADGIANRG
TSPSALLDNEGGSGNDEEAPTVPETSSWSGSSSAAKSDSGSNDDDTRQRE
SAEGSGSDTRTETRGRSDRGREVGTKTIPGTAETEGVMPTRSTPPQLDCL
RGRYARADRKSKSAYAIKKAAAVTAAGAAGASTTAPQTPHSLISATRCDK
RGLFDRSGKRDRGGTGAGRGGGRGARGPASWRDRLAAVQRRRAVLDDLRR
SEATRLVEARAKAEARVPDNASVAASVSLRGARRFTTLEGGAGDNSNSAK
KKNSNMIISSNSNKSAPDSASHRAVQAAVTVQRAFRSTLQYEAWLGDQSD
RDYLSQVTLRDSDGKRDEPEPSHHHSLALKRSPSSTGGADSIISRLNTVR
SDEWAAHRAKKLHDRHVTIRLKRMVRGFICCTQARFLLLQLLWDRTEGNI
LGERRSKRAAVESRAASTVQQLSHIRKIAVGLIKIQNSAEAFKLEQQARQ
AKRYPKTLAKPSGDKHAGRHQGGGGGRVFDTAKQARSEKAECEAILREHG
RRGRRLVDIAVRDRFLRDLLYSHRRQHIIRDQREYLMETSRPPLVDSRDV
KRMLECPAEEMHMFSDPKNYRTRPRYTRLSLPFREIGGIIQETIASNVRS
EYRDKLKEALGTTDARESGIHQQEPYPSPTDAVAEEINTGWVHKDATATS
AQQLRQQQQAPTAEHAHKNSIKTRASVNFHTGAAATTAPPHQQHAAVGVL
AAGHKPTPAVLAPQTATAVAAAASCSAVEGRAWRSGRDGAAMAVPTTAAK
AAAA* back to topmRNA from alignment at Ecto-sp13_S_contig13:37022..47193- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig13.2457.1 ID=mRNA_Ecto-sp13_S_contig13.2457.1|Name=mRNA_Ecto-sp13_S_contig13.2457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10172bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13:37022..47193- (Ectocarpus species13 EcNAP12_S_4_19m)
CACGGGACAACACTGCTGAAGCTGCTGATTCAACCCCACAGTGCCTCCTT
CCGTCCACACGCCGTCCAAAACACCCGCAGTTGGAGTAACATTGCTCAGG
CTTTCACCGACAAGAAGCGCATCAGGCCTGCGTCCGCTCCAACCATCAAA
CGCGAAGAACATCAGACCCAACCGAGCGTAGATGCTGGCAGCAGTCGGGG
TCGGGCGGAGACAGCGCGGGCGCGGCTGGCGGACGGCACGACTCGAAGGG
ACGGGCCGATGTCGTTCCAGCGCGCGGAGGAGATACAAGAGGTTATCGAT
ATTTTACAGCACACCATGGTGGTAAGTTTTGTTTTTTTCGGTCTATCAGA
CCGGGTTGTGTGTACGGCTACACCTCCTGACCCAGGTTAAGATGGCCTGA
AAAAGAATGACCGCCATCTAAATTGCTGTGAGTCATGCAGTAACGTCGTT
GGCAGGTTCCTGGACAGCAAATTTGTTCCGTTCACGTTTTCGACGAGAAT
CGTATGAGAAAACCATGTCCACAATGTGAAGCGAAAATTTTCGCCAAGGA
AGGTGGACTGATAACTTTGGATGCAGAATCGAAATGTTTGTTCAATCAAG
TTGTTTGTGCGCCCAGTGAAATCTATCTTCGGTTTAGGGCAAACAAGGAA
TGCCTCGCGAAACTCGTTTGGCTGTGAGAAGATGAAGTCTTGCCGACCTG
GCGATACCACATGAGAAACAAATACACATATTTTCTCGCTCAAATCTGAA
GAGTCCACACAGTTTGTTTTCTTTCAGATCCAGATTCTTCGCCAGCACTC
CCCAACAAGTGTTGATTTTACTCGGAAGGGAGAAGAGTCTACCCTGGCAT
GTTGCGAGAGGCGACGGATCAGCTCTTGATTTGCTACCCATCACGACGTT
AAGCACTATCTGCCCCCCCACCAGAAAAGGAACGAGTTCTGTATCTCTTC
GAATATGGCATAACAACGAACAAGGGCAACCAGACACCGCGAAAGGTTGC
GCCTGCAGACAGAGGCCTTTCTGCGGCGCGGGGGTAAATTCCGGGATAAA
GACCCCTTTCCCGAGAAATAATACCTCGGCGGTTGTGTTGGCCATGGTGC
CCGTTCTATTCTCTCGTGGAACACACAATTCCCGTTGACACACCGCTCAC
ACGCGTATGACGGTGAAGCACGCGTCGTATCAGAACGCCCCGTCGGGCAT
CCGGCCAAATTCCGTTACACAGGGCGACCGCGGTACACCACCAACCCACC
ATTATTTTCGTGCGAACGCGTACGACACCCAAACAGGCGCGCTTGCGGGG
GAAACCAAAGAAAGGGGAGCGCAAGAAGGCCGCCGAGGCCGCGAAAAGGG
CTGGCTCGGCCCCGGGCACGTCAGTCGTGGATCGACGCTCACACGGGTAC
GCCCCCCGGGTAGCGTCTCCTTGTGGCTCGGTGTCGGCGACGTCTTCGCG
TGGTGACGACGCTGACAGACGCAGATCGGCCTCGGGGGCGGGCGGGGAGC
AACGACGGAGACAACGACGGCCGAGCACGGCATGGCATCATCGGGAACTT
CCCGCGCGGTGTCCACCGGCGATTCCCGCGGGAATGGCGCATGGGTCGAA
GGTGAAGCATGTTTTCTGGGTCGATCTCCATCTGCTTGTCCGTCGGGGAT
ACCGTTCTTCCGACGCGTATCCCACGTGCCCCGCCGACCAGAAGTCCACC
ACGCGGATAGCTATATCTTGGCAAGTTTTTGTGGGTGTTCCACGAGAAAG
AGACCCAGTACAAGTCGCAAATGCAAAGCTTCCCCGGTTGCCTTGGAGAA
GAAAGGAATCGCCAGATCTGTTCATATCATTTCTACGGCCCACCGTCGCT
GCTATCATCTCTAGCCCCTCTCACTGCTATAGCAATTTTCGTTGGTTGAA
CCCGGTATTCAACGCAGGCACGCCCCCAAACTGCTGCCGTCATGGCCTCT
CCCTTCTCCAAGAGTAAGAGGTCACTAGCTGAAGACTTGGAGTCACTAAG
ACGACCTTCCGACCTCATCGGGGACGACAGTCGTAAGGCCGACGCCGACG
GAAAGCTCGGCATGACAAGGGCCCGAATATACTCCTTCGGAGCGTCCACG
CAGGGAGGTGGCGGTCACGAAGATGACGTGCTACGCGCCACCGCCATTGA
TGCCGCGCGTCGCAGCCGCCTGCCTCGCCGCTGCTCATCAGCCGGCAGCG
CTCCTCGTGATCTGCGTCCTGCGGTGCCCGGGAGACGAGAGATAGGGAGA
GACTCGGTGCGCGATGACGAGGACGGGGGAGGCGGCTCTGCCGCTGGGGG
CTACGGCGGGGTCAAGGGCCGGCATGGGAACGCCTCCTGCCGGGCTGGTG
TGGGCAGTGTCCATGAAGACTCTACCGAAAGCTCGGAACATCTTGGTGTT
GTTGATATCTCCAAGGTGAGAACGAAACACAGCGGAAAGTAAGGCCTCAA
GGGAAAGGGCTCAAGGCGGAAAACTCTGGCAAGTCTCACAGGAGATTGCG
CGGTGTGCCAGTACGCACAACTGATCTAGTAGCTGCGGTGTTTCGCATTA
GCACAGCGCCTTCTTGTGGTCGCTGCTGATTGGGTGGCGTTTGTACCTAG
TTATGTCGCTCCACGTCGAGTGACGTTTCGTAAGCCGTGCGAAGAGTATT
GTCTCGTTGTTCATCAATCTATGCAAGCCTTGCTCTCTAAGTCCGTCGCG
TTCCTAACCGCTTGCACAACGTTCGAGGAGTGTGGGTGGTCCACCGACTT
CCAATTCTGCCCCAACATCGTTGACAGGAAGATGATCTGAGCTGGTTGTT
CTTGTCGTCGTTCTCTCGCCAGCTCACGACAGTCTTGAGTCACGCAGAGG
TCAGCGGATACATCCGTACGACCGGTGGAAAGCGTTCAAGCTTCACCAGT
GGCAGCAAGCTTAACGGCAGCGGCGGCGGCGGCGCATCCATGTCAGCGAT
TCGAGGTAGCCCTTTCCTGGCTGACGGCATAGCCAACAGAGGCACCAGTC
CTTCCGCGCTCTTGGACAACGAGGGGGGCAGCGGCAACGACGAGGAAGCA
CCAACGGTGCCCGAGACTAGCAGTTGGAGCGGCAGCAGCAGCGCTGCAAA
GTCAGACAGCGGCAGCAACGACGACGATACGAGGCAGAGGGAGAGCGCCG
AGGGGAGCGGGAGTGACACGAGGACGGAGACGCGCGGCCGGAGCGACCGG
GGAAGGGAAGTAGGCACCAAGACGATTCCGGGGACGGCGGAGACGGAAGG
TGTGATGCCTACCCGTAGCACACCGCCCCAGCTCGACTGCCTACGAGGAA
GGTGTGGTACGCAGGGCACTAGGCATAGGAAGGCACTTCGCTGCAAAATG
ATTCTCGGTGGCCACAAAGAACTTTTTTTGGGCGGGCCAGTCAAGAGAGC
ACCTCGATCAACTCCACTGCCGTACTGCGTACAATGGGTTGCATGTTTCC
CATCACTGCTACTGTCTGACTGCCACTGTGCCTCTGCACTCCATTGCGTC
GAGCCAGAGCAAGACAAAGCAACGTTTCACTCACGAAAAAGAACAGTCGA
CAGGGTGGGGTGAGGCAGACAACAAATCACGATCACCAGTGGAAATCGAC
AACAACATGGTGATAAGCAGCGAACGACTTCCCCCCTTCGTGTCTCCCTC
GCAACCCTCTTTTTTCGCCGCCCCCTTTCTGACCAGGTACGCTCGCGCGG
ACCGCAAGAGTAAGAGTGCGTACGCCATCAAGAAGGCAGCCGCCGTCACC
GCCGCTGGCGCCGCCGGAGCCTCCACGACGGCCCCGCAAACACCGCACTC
GTTGATTTCCGCCACACGGTGTGACAAACGGGGACTTTTTGACCGAAGTG
GGAAACGAGATCGAGGAGGAACGGGAGCAGGAAGGGGGGGAGGAAGGGGA
GCGCGGGGTCCGGCGTCGTGGCGGGACAGGCTTGCCGCCGTGCAGCGGCG
GCGGGCGGTGCTGGACGATTTGAGGAGGTCCGAAGCGACCCGGCTGGTCG
AAGCTCGGGCGAAGGCGGAGGTATTGCGTAGTCCTGGGGTTGTGGCGAAA
TCAGGAGAGGGACATCCCTGTAGTTCAGTTCTGGATGAAGATGAACGAAT
GGCATGCTCGTCTTGGCACAGTTGAACGATTGCGGCGGGAGTGAGTGAAT
TGCTCGGCGTTGGGGAAAGAGTGGAGCAGGGGGGGGTGGGGTTAAACAGA
GAGAGAGAGAGACGTCTCATTCAAGCGATCGATGGTAGTTGGTAGTTGTA
CACGCGAGTGTCTTTCCCGCCGGCTGCTGCTACGTGATGTCAATAGGTTT
GAATGTTCCGTAGCCTTTCGTTGCTCAAACGGATCTGGTACTGTGGGCTA
CTGCAGCGCGGTAAAACTGAACCGCTCGCTCAGAAAATCAGGGTGCCATG
TGAACCTCCCCTCCGAAATCTCCTCGTCAGCGTCGACTACGTGCGACAGC
ATCTATCAGGGCAACGTTGATGTAACATGATTCTTCACGGAAAACAGAGA
CAATACGTATGCTAGCTCGCCATGCGTACACAGCATCGAAACAGTAGGCG
ATAGGAAAACGTCGTCAGGGACCGGGAAGCGTCTCCTCCAACTGGAACGT
GGTAGTACGCTCCACAATTTCCTCACGTGCAACCCCCCTCTGCCACCCCC
GCCGCCGTGAATCGCATCGTGCCCTTGATTAGGCGAGGGTCCCCGACAAC
GCATCGGTGGCGGCTTCGGTATCCTTGCGAGGGGCGAGGCGCTTCACGAC
ACTTGAAGGAGGTGCCGGCGACAACAGCAACTCCGCCAAAAAGAAGAACA
GCAACATGATCATCAGCAGCAACAGCAACAAGAGCGCCCCCGACTCCGCG
TCACACCGTGCCGTGCAGGCTGCTGTGACGGTCCAAAGAGCATTCCGCAG
CACCCTTCAGGTGCCGCGCCGTCACGACACCGTTCCACCGCATGCGTGTA
TCGTTGACGTGCTGGAGACTGCTGTATCAGCGCTAGGAAAGACGATCCAA
TCACTCACTTGTGACAGGCGTATGTGGCTTTCACAAGCCCAGCATTGTTT
CGGCCACCCACAAGGAAAATGTTTGACACTACGAGCGCCCCCAATCAAAC
AATTCAGCCGACCCCTATCCCACCTGATGCTGCCCAACCAACCGTCAAAG
TATGAGGCATGGCTGGGAGATCAGAGCGACCGAGACTACTTGAGCCAAGT
GACGCTCAGAGACAGCGACGGCAAGCGAGATGAACCAGAACCATCACATC
ACCATAGGTACTTTTCTGCCAACGCTACGATAACATCGTGAACGTGATAC
ACATCTGCTGTTGACAGAGGCAGAAGATCTTTTGCGAGCGGAACAAGTTG
CGGCGAGCTCCTTGATTGGCATGTGGACATTCCACACAAGGTTTGGGGGT
GCCCGGAGCATCCAAGAGTATTTCATATCTTGAAGTACTCACATGACAGT
ATCAACACACTCTCCCCGAACGTAGTGTTGCCACTTCTAGTAACGTGGAA
TTCATGACAATAGCTTGAACAGACACAAAGAGAGAGTGGGGACGGAGACA
ACGGCCCGACAAGGGTAAGAAACCAGCTCTACCTGACAGACCCCTAGGTC
AAGCGCACGAAAGGCAACAAGACCCCCACCGGCAAGGCCTCCACCTGCCA
GCCCCGGTACTCCAACGAACAACGCCATTGCAACCTCCCAACCAACATGC
CTCCCTCGAAAAACACCAATTCAAATTTTCCCGCTGGACGTGCATGGATT
GTTGCACGTGCGCAGTTATCCCCTGCCGTTGACTTGTGCTTTCATTCGGC
GCAGTCTCCTCGCCCTGCTCCTCCACAACATATCACGCGCGAACCCCTTG
CCCCCGTCCCCTCCAACACCCCCAGCTTGGCGCTGAAAAGATCACCGTCC
TCAACCGGCGGCGCCGACTCGATCATCTCCCGCTTGAACACCGTGAGGAG
TGACGAGTGGGCCGCCCACAGGGCCAAGAAGCTTCACGACAGGCACGTGA
CGATTCGACTGAAACGAATGGTCCGCGGATTCATCTGCTGCACGCAGGTA
CTGACTTCGGAAGAAAGGCGACATCAAAACTCCAGACTGCCGTCGTCGAC
TGTCCATCTAACGGTGTTTGCCATTTCGTGCCACCAACCCCTGTTCGGTT
ACTTTAAACCTGGCGTGCCCCACCTCCGCTGCTTTTGGTGAATTGGTGAT
CGATATCCAACACAACTGTAGTCTCCACAGTAAGCCACGAATGGTGATGC
TCAGTAACTCCCCCCCCCCCCCCCCCCGGTTCCCGTAGGCACGTTTCTTG
CTGCTGCAGCTGCTGTGGGACAGGACGGAGGGCAACATCCTTGGCGAGCG
TCGCAGCAAGCGCGCCGCTGTGGAGTCTCGCGCCGCGTCTACCGTCCAGC
AGCTCTCCCACATCCGAAAAATCGCGGTCGGGTTGATCAAGGTTCGGTAG
CTCTTTGTACGCCGGCAAGAATTGGTTGATCGGATCACTTTTCTAGTTTC
GTTCTGTCGATAGCTTAAGGCCTGCCGTTTCTCTCTCGTGGGGACAATCT
GTCTAGCCAGGGTGTGATGCGGGTGAACTTTAGGGCGACAAAAACAACAG
GGAGGCTACCGATTTGTTGGGCAAGGTTGTGGCATGCAGCTGGCTCTTCT
CGATTACTCTCCCCGACCCATCCCATCTTTAGAGAAATTGACCCAGTCAT
GGTTTCCCTTCGATTTGCACGAGACCTTTCTCGCATTAAAACACGCCAAA
ATAGATGAACAATTGATACCTTCACTGCAATGGGCTTAAGTCGGCTTTGC
CTTGTTCGTTTCAACTCTCGACTACGAGTACGCCTGGAATGTAATCACAC
CCTCGAGGTACCACAAACGTCCGGCAATCCGGTAAAGTACTGTGCAACAC
GGCCGAACAACAACAAAAATGACAGATTCAGAACAGCGCGGAGGCGTTCA
AGCTGGAGCAACAAGCAAGGCAGGCGAAACGGTACCCTAAGACTTTGGCG
AAACCTAGCGGGGACAAGCACGCAGGCAGGCATCAGGGTGGTGGTGGGGG
GCGCGTCTTTGACACAGCCAAGCAGGCTCGTTCTGAGAAGGCGGAGTGCG
AGGCCATTCTCAGGGTGAGCATGCCAAGAACGAGCACACAAACACGCTGT
TCCAACAGAAGTGTAGTCCTGCTGATTTCTCTTTCCCGTGGACGTGACAA
CAGCCAATAGAAAATTAAGCAGGGTAGATACGATTCATGGTTGGGATGGC
ACGTGTGCAACAACCAAAAGGGGGGGGGAACACACCGAAGCCATCACCTG
TGTCCCTCCATTCCGTTTTTTTTCTTCCCTCTCTTCTCCATGTGCGCCTT
CCCATGTCACAGAATAAAAACCGTCAGATGGTGCGAATAAAACTTCGCTC
GTGACCGATTGCTTTATTATTACGGAGAGACACCGCAAGCGTTCAAACCC
TTTCCGAGGCATGGGCCGAATAGAATTTTTGTGATAAGCACTGATTCCTC
CAGCTTTCCGTCGGTTCTGTGAAGCACAACAGCTACCGTGCTTCATACAG
GTCGAGTACGCAGAGAGCATCGCTGATGGGGCTACACGAAGTGCTCCTCG
GAGACTTGGTTGTTTGTTCCGTTTTAGGTACACATCAGCAACAAGACACC
GGCGTGAGCTGTCTGCCCAACCAGCAGAATTTCCTCCTTCGCCATTAACT
GCAGGCAGGGAGAAGAAGCATAATTGCTGCTTTGGCACTCAGTAGGTGCA
AACGCAGTGCGCTGTTTATCTTCGTTCGAGTCTCCATGGCTGGAAAGCAA
ACAAGACAGGATCTTAGAAACGAACATACTATTGACACATGAAAGAACAT
ACACCCTGCTGGGCGTCGCCTGGATTTATACGGCTGGAAAATATGCAAAC
TGCGACCTACATGGAACCCACCAGCCAAAGTAACGGATTGATCCTGTGAG
CTATGCCTTTCAAAGAAAATGTGCAACTGAACTTAAATTATGCTCCTTGT
CGATGCGTTCGAAGGAGCACGGGCGGCGGGGGAGGCGATTGGTGGACATA
GCCGTGAGAGACAGGTTCTTGCGCGACCTCCTTTACTCTCACCGCAGGCA
GCACATCATCCGAGATCAACGCGAGTACCTCATGGTAAGTGTGAAGTGAG
GGTTGTGGCCATGCACCGGTTGCTCCCCCCTGCAAACAGTTCGGCCACTA
GCCCTCGAGCGGGAACGAGAGCGTGGTGAGAAGCAGACGGATTTGCCATG
TCATTGTTGTTTTCGTTCTATGACGACGTTAAGGCGGAATTTACCATCTG
GCGCATTTGTGTGCTCATGCCCCCCCTCGCAAAGCGACTCTAAGCGAAAC
AAAAGGAGGGGATGCTCTTAGGGGGCGTGGAAGTCAGGAGGCTACGAGGA
AGGGATAGGCTTTGGCTTGCCTGAGACGATGAGAGATCCTTCAGGATCCA
CGAACGAACTCCTCAACGTGCATGCGCGACATATGCGGTTGCATCAAAGC
TTGAGTGTTCGCAGTCGTCATTGTAGGGGTACTGACGTTTGTCAATCGAG
GCGAGGCTGGGGCTGAGACAGTTGTTTTTTTTCTTGCATCCAAGAAGTGC
ATCGTATCTAAAGCAACTTCGTTTGTTTGCACAGTCATTATTTTTTGTAT
TCATGTTTGTGTGCCGCAGAACCCTCATCGATCTCCCTCGTTCACTCCCT
CCGCTACTTGCTTGGTTCAACCGCACTCTCTCCTTCTTCGACATCAAAGC
AATATAGCAATCGGCTTCCCCAAGACGTGGATGACCCCCTGTAAGATCTA
GTTTGACCATTTGCACACCTTGTATTACCTCGTGCTATTCACCGACCGTC
TCCACCTGTTGTTGTGCTTTGCTCTTGAAACGTGTTTCTTTTCATCAGGA
AACGTCTCGCCCGCCGTTGGTGGACAGCCGGGACGTCAAGCGAATGCTCG
AGTGTCCGGCGGAGGAGATGCACATGTTCAGTGACCCCAAGAACTACCGT
ACGAGGCCGCGGTACACCCGTCTTTCACTTCCTTTCCGAGAGATCGGAGG
GATTATCCAGGTCAGCGTGCTTGCGGCCTTCCTGTGTCGCTCTGTTCCCA
TGCCACAGGTGCTGACAGCACACACGTGGTAGAACATTGCATACACAGAA
CAGACCCGATTCGGTACGAATTAGGATTCCCGATGCCCACACGCCCACAC
AATCGAAGCTTTCCAACCATGGATCATGCTTTTCGGAGACGTAGGAGAAC
CTTCGACGTTGCGGAGAATCTGGCATGGTGTACGTTTATAGTCGGTTATT
GCGATGGGCACTTCCTTCTTCACGGACGACGGTAAGGGTCGGTGCAACGG
TCGGTACCTACTGCAAGCTGGCTCCAAGACACTCTGCCGCCATTCCTTTA
CTTGATTGTTTTGCGGGATACCTTGACTTTACCGCGACGGATTCCGGCGT
TCATTGGTGTCGAACCTCCTCGATTATTCGTCATAGACTCTACAACGGTC
CGCATGGACTCTCTGGGGCAGTTTCGGTCGTACAATGTGAGCCTTGTCCC
TCTTTCGGTGTGTTGGCAGTGAGCGGTTTCAATGTGTATCCTCTGTTCTG
GAGAGAGCGGGGGGGGTGGGTCAGAAGTCGGATCCATTCATCTCAATGAA
ACACCACCACGAAATCGTGTTCTATCACAGGAAACCATCGCCAGCAACGT
GAGGTCGGAGTATCGAGACAAGCTCAAGGAGGCGCTCGGCACTACGGACG
CAAGGGAAAGCGGGATCCATCAGCAGGAACCCTATCCGTCGCCGACCGAT
GCTGTCGCCGAGGAAATCAACACCGGCTGGGTGCACAAAGACGCCACCGC
TACGTCCGCACAACAACTGCGGCAGCAGCAGCAAGCGCCGACAGCGGAGC
ATGCGCACAAGAACAGCATCAAGACGCGAGCATCGGTAAATTTCCACACC
GGGGCAGCGGCAACAACCGCGCCACCGCATCAACAGCACGCCGCCGTTGG
AGTGCTAGCGGCGGGGCACAAGCCGACGCCGGCTGTCCTGGCACCGCAGA
CGGCGACAGCGGTGGCCGCCGCAGCATCATGCTCCGCCGTCGAGGGAAGG
GCGTGGCGAAGTGGTCGAGACGGGGCTGCGATGGCGGTGCCGACGACGGC
AGCAAAAGCCGCTGCAGCGTGA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig13:37022..47193- >mRNA_Ecto-sp13_S_contig13.2457.1 ID=mRNA_Ecto-sp13_S_contig13.2457.1|Name=mRNA_Ecto-sp13_S_contig13.2457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3615bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13:37022..47193- (Ectocarpus species13 EcNAP12_S_4_19m)
CACGGGACAACACTGCTGAAGCTGCTGATTCAACCCCACAGTGCCTCCTT
CCGTCCACACGCCGTCCAAAACACCCGCAGTTGGAGTAACATTGCTCAGG
CTTTCACCGACAAGAAGCGCATCAGGCCTGCGTCCGCTCCAACCATCAAA
CGCGAAGAACATCAGACCCAACCGAGCGTAGATGCTGGCAGCAGTCGGGG
TCGGGCGGAGACAGCGCGGGCGCGGCTGGCGGACGGCACGACTCGAAGGG
ACGGGCCGATGTCGTTCCAGCGCGCGGAGGAGATACAAGAGGTTATCGAT
ATTTTACAGCACACCATGGTGGCGCGCTTGCGGGGGAAACCAAAGAAAGG
GGAGCGCAAGAAGGCCGCCGAGGCCGCGAAAAGGGCTGGCTCGGCCCCGG
GCACGTCAGTCGTGGATCGACGCTCACACGGGTACGCCCCCCGGGTAGCG
TCTCCTTGTGGCTCGGTGTCGGCGACGTCTTCGCGTGGTGACGACGCTGA
CAGACGCAGATCGGCCTCGGGGGCGGGCGGGGAGCAACGACGGAGACAAC
GACGGCCGAGCACGGCATGGCATCATCGGGAACTTCCCGCGCGGTGTCCA
CCGGCGATTCCCGCGGGAATGGCGCATGGGTCGAAGGCACGCCCCCAAAC
TGCTGCCGTCATGGCCTCTCCCTTCTCCAAGAGTAAGAGGTCACTAGCTG
AAGACTTGGAGTCACTAAGACGACCTTCCGACCTCATCGGGGACGACAGT
CGTAAGGCCGACGCCGACGGAAAGCTCGGCATGACAAGGGCCCGAATATA
CTCCTTCGGAGCGTCCACGCAGGGAGGTGGCGGTCACGAAGATGACGTGC
TACGCGCCACCGCCATTGATGCCGCGCGTCGCAGCCGCCTGCCTCGCCGC
TGCTCATCAGCCGGCAGCGCTCCTCGTGATCTGCGTCCTGCGGTGCCCGG
GAGACGAGAGATAGGGAGAGACTCGGTGCGCGATGACGAGGACGGGGGAG
GCGGCTCTGCCGCTGGGGGCTACGGCGGGGTCAAGGGCCGGCATGGGAAC
GCCTCCTGCCGGGCTGGTGTGGGCAGTGTCCATGAAGACTCTACCGAAAG
CTCGGAACATCTTGGTGTTGTTGATATCTCCAAGGAAGATGATCTGAGCT
GGTTGTTCTTGTCGTCGTTCTCTCGCCAGCTCACGACAGTCTTGAGTCAC
GCAGAGGTCAGCGGATACATCCGTACGACCGGTGGAAAGCGTTCAAGCTT
CACCAGTGGCAGCAAGCTTAACGGCAGCGGCGGCGGCGGCGCATCCATGT
CAGCGATTCGAGGTAGCCCTTTCCTGGCTGACGGCATAGCCAACAGAGGC
ACCAGTCCTTCCGCGCTCTTGGACAACGAGGGGGGCAGCGGCAACGACGA
GGAAGCACCAACGGTGCCCGAGACTAGCAGTTGGAGCGGCAGCAGCAGCG
CTGCAAAGTCAGACAGCGGCAGCAACGACGACGATACGAGGCAGAGGGAG
AGCGCCGAGGGGAGCGGGAGTGACACGAGGACGGAGACGCGCGGCCGGAG
CGACCGGGGAAGGGAAGTAGGCACCAAGACGATTCCGGGGACGGCGGAGA
CGGAAGGTGTGATGCCTACCCGTAGCACACCGCCCCAGCTCGACTGCCTA
CGAGGAAGGTACGCTCGCGCGGACCGCAAGAGTAAGAGTGCGTACGCCAT
CAAGAAGGCAGCCGCCGTCACCGCCGCTGGCGCCGCCGGAGCCTCCACGA
CGGCCCCGCAAACACCGCACTCGTTGATTTCCGCCACACGGTGTGACAAA
CGGGGACTTTTTGACCGAAGTGGGAAACGAGATCGAGGAGGAACGGGAGC
AGGAAGGGGGGGAGGAAGGGGAGCGCGGGGTCCGGCGTCGTGGCGGGACA
GGCTTGCCGCCGTGCAGCGGCGGCGGGCGGTGCTGGACGATTTGAGGAGG
TCCGAAGCGACCCGGCTGGTCGAAGCTCGGGCGAAGGCGGAGGCGAGGGT
CCCCGACAACGCATCGGTGGCGGCTTCGGTATCCTTGCGAGGGGCGAGGC
GCTTCACGACACTTGAAGGAGGTGCCGGCGACAACAGCAACTCCGCCAAA
AAGAAGAACAGCAACATGATCATCAGCAGCAACAGCAACAAGAGCGCCCC
CGACTCCGCGTCACACCGTGCCGTGCAGGCTGCTGTGACGGTCCAAAGAG
CATTCCGCAGCACCCTTCAGTATGAGGCATGGCTGGGAGATCAGAGCGAC
CGAGACTACTTGAGCCAAGTGACGCTCAGAGACAGCGACGGCAAGCGAGA
TGAACCAGAACCATCACATCACCATAGCTTGGCGCTGAAAAGATCACCGT
CCTCAACCGGCGGCGCCGACTCGATCATCTCCCGCTTGAACACCGTGAGG
AGTGACGAGTGGGCCGCCCACAGGGCCAAGAAGCTTCACGACAGGCACGT
GACGATTCGACTGAAACGAATGGTCCGCGGATTCATCTGCTGCACGCAGG
CACGTTTCTTGCTGCTGCAGCTGCTGTGGGACAGGACGGAGGGCAACATC
CTTGGCGAGCGTCGCAGCAAGCGCGCCGCTGTGGAGTCTCGCGCCGCGTC
TACCGTCCAGCAGCTCTCCCACATCCGAAAAATCGCGGTCGGGTTGATCA
AGATTCAGAACAGCGCGGAGGCGTTCAAGCTGGAGCAACAAGCAAGGCAG
GCGAAACGGTACCCTAAGACTTTGGCGAAACCTAGCGGGGACAAGCACGC
AGGCAGGCATCAGGGTGGTGGTGGGGGGCGCGTCTTTGACACAGCCAAGC
AGGCTCGTTCTGAGAAGGCGGAGTGCGAGGCCATTCTCAGGGAGCACGGG
CGGCGGGGGAGGCGATTGGTGGACATAGCCGTGAGAGACAGGTTCTTGCG
CGACCTCCTTTACTCTCACCGCAGGCAGCACATCATCCGAGATCAACGCG
AGTACCTCATGGAAACGTCTCGCCCGCCGTTGGTGGACAGCCGGGACGTC
AAGCGAATGCTCGAGTGTCCGGCGGAGGAGATGCACATGTTCAGTGACCC
CAAGAACTACCGTACGAGGCCGCGGTACACCCGTCTTTCACTTCCTTTCC
GAGAGATCGGAGGGATTATCCAGGAAACCATCGCCAGCAACGTGAGGTCG
GAGTATCGAGACAAGCTCAAGGAGGCGCTCGGCACTACGGACGCAAGGGA
AAGCGGGATCCATCAGCAGGAACCCTATCCGTCGCCGACCGATGCTGTCG
CCGAGGAAATCAACACCGGCTGGGTGCACAAAGACGCCACCGCTACGTCC
GCACAACAACTGCGGCAGCAGCAGCAAGCGCCGACAGCGGAGCATGCGCA
CAAGAACAGCATCAAGACGCGAGCATCGGTAAATTTCCACACCGGGGCAG
CGGCAACAACCGCGCCACCGCATCAACAGCACGCCGCCGTTGGAGTGCTA
GCGGCGGGGCACAAGCCGACGCCGGCTGTCCTGGCACCGCAGACGGCGAC
AGCGGTGGCCGCCGCAGCATCATGCTCCGCCGTCGAGGGAAGGGCGTGGC
GAAGTGGTCGAGACGGGGCTGCGATGGCGGTGCCGACGACGGCAGCAAAA
GCCGCTGCAGCGTGA back to top
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