prot_Ecto-sp13_S_contig12965.2437.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12965.2437.1
Unique Nameprot_Ecto-sp13_S_contig12965.2437.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length247
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12965.2437.1 vs. uniprot
Match: D8LIV9_ECTSI (Novel protein containing a T-complex protein 11 domain (Zgc:73347) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV9_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 1.240e-85
Identity = 179/248 (72.18%), Postives = 180/248 (72.58%), Query Frame = 0 
Query:    1 MEEAKAAAA-PETNQEDEAQEESASNVLRRLSSPIFGTAGFNSDSEGNDHSDGDFSTTKESRGDGEGSDDEEETERKEGAAEVVQRWWRECRRASKRIGAVVAARPAFVRIQQLFDKLDAGQMSFERTGLALQNPDIQRAVTKALGTVPRDDALLAMPKASRSTRAVLSSLMIVYHPGEVLTAEGDXXXXXXXXXXXXXXXXXXXXXXXSPTRLGSTEEPTPVEGVAATKKKLDPVAAALRNASALLL 247
            MEEAKAAAA PETNQEDE QEESASNVLRRLSSPIFG AGFNSDSE                            ERKEGAAE+VQRWWRECRRASKR  AVVAARPAFVRIQQLFDKLDAGQMSFERTGLALQNPDIQRAVTKAL  VPRDDALLAMPKASRSTRAVLSSLMIVYHPGEVLTAEGD                                EPTPVEGVAA KKKLDPVAAALRNASALLL
Sbjct:    1 MEEAKAAAAAPETNQEDETQEESASNVLRRLSSPIFGAAGFNSDSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKEGAAELVQRWWRECRRASKRTRAVVAARPAFVRIQQLFDKLDAGQMSFERTGLALQNPDIQRAVTKALSAVPRDDALLAMPKASRSTRAVLSSLMIVYHPGEVLTAEGDDEE-------------------------SGDAEPTPVEGVAA-KKKLDPVAAALRNASALLL 222
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BLAST of mRNA_Ecto-sp13_S_contig12965.2437.1 vs. uniprot
Match: A0A6H5L8M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M3_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.690e-40
Identity = 86/117 (73.50%), Postives = 93/117 (79.49%), Query Frame = 0 
Query:    1 MEEAKAAAAPETNQEDEAQEESASNVLRRLSSPIFGTAGFNSDSEGNDHSDGDFSTTKESRGDGEGSDDEEETERKEGAAEVVQRWWRECRRASKRIGAVVAARPAFVRIQQLFDKL 117
            M+EAKAAAAPETNQEDEAQEESASNVLRRLSSPIFG AGFNSDS+ ++HSDGDF+  +ESRGD                  VVQRWWRECRRASKR  AVVAARPAFVRIQQLFDK+
Sbjct:   18 MKEAKAAAAPETNQEDEAQEESASNVLRRLSSPIFGAAGFNSDSKDSNHSDGDFNINEESRGDXXXXXXXXXXXXXXXXXXVVQRWWRECRRASKRTRAVVAARPAFVRIQQLFDKV 134
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12965.2437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIV9_ECTSI1.240e-8572.18Novel protein containing a T-complex protein 11 do... [more]
A0A6H5L8M3_9PHAE2.690e-4073.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12965contigEcto-sp13_S_contig12965:728..4459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12965.2437.1mRNA_Ecto-sp13_S_contig12965.2437.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12965 728..4473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12965.2437.1 ID=prot_Ecto-sp13_S_contig12965.2437.1|Name=mRNA_Ecto-sp13_S_contig12965.2437.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp
MEEAKAAAAPETNQEDEAQEESASNVLRRLSSPIFGTAGFNSDSEGNDHS
DGDFSTTKESRGDGEGSDDEEETERKEGAAEVVQRWWRECRRASKRIGAV
VAARPAFVRIQQLFDKLDAGQMSFERTGLALQNPDIQRAVTKALGTVPRD
DALLAMPKASRSTRAVLSSLMIVYHPGEVLTAEGDDDDGGGSGAAAAATT
ASSSTTPPSPTRLGSTEEPTPVEGVAATKKKLDPVAAALRNASALLL
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