mRNA_Ecto-sp13_S_contig1292.2401.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 308 bits (790), Expect = 3.110e-96 Identity = 167/312 (53.53%), Postives = 185/312 (59.29%), Query Frame = 1
Query: 1 VFELTNGPHQQGVFVFDNSSGHNAYDKDALLAHKINLAPGGEKA-------------------------------------------------------------------------------------------------DKCKADNAASRQAIAAFNKAGEEWERVLKQARRXXXXXXXXXXXXXXXXXXXXXRCCLERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLKILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
+FEL+NGPH+QGVF+FDNS+GHNAYD DALLAHKI+LAPGGEKA +KCKADNAASRQAIAAFNK GE+ ERVL+QARR RCC+ERVFSDL AFKAQLNKV+QIFK+AGHVCIFLPK+HPELNAIERYWGYVKHVLR HC YSLTHMLKILP ALSGVPLEHIRAWSR+VWLY+EAYDDG+V YLK+RE KEW+THR
Sbjct: 526 MFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNKGGEQRERVLEQARREQQSSPAEGPAAEGRAAARRQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRVVWLYIEAYDDGMVGYLKNRELKEWHTHR 837
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5JD27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD27_9PHAE) HSP 1 Score: 250 bits (639), Expect = 2.270e-75 Identity = 147/309 (47.57%), Postives = 164/309 (53.07%), Query Frame = 1
Query: 7 ELTNGPHQQGVFVFDNSSGHNAYDKDALLAHKINLAPGGEKA------------------------------------------------------------------------------------------------DKCKADNAASRQAIAAFNKAGEEWERVLKQARRXXXXXXXXXXXXXXXXXXXXXRCCLERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLKILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
ELT+GPH+QGVF+FDNS+GHN YD DALLAH INLAPGGEK +KCKADNAA+RQAIAAFNK GEE ERVL+QA R C + +A LNKVEQIFKEAGHVCIFLPK+HPELNAIERYWG +KHVLR HC SLTHML+IL GA+SGVPL+HIRAWSR+VWLYVEAYDDG+ YLKDRE KEW+THR
Sbjct: 395 ELTSGPHRQGVFIFDNSTGHNPYDADALLAHNINLAPGGEKVALRVFEDVDGKKVYPTFQLGDTLLTDRKIFLPKTEEQKKNKKRKSGTALDKDKFPVGTKVVLRSPLLGLNKGGEQMLREMGLWRLRGEKRGLVKGCNKCKADNAAARQAIAAFNKGGEERERVLEQA-------WWEQQKFFHRGSRGSGRGCWK---------EAALNKVEQIFKEAGHVCIFLPKYHPELNAIERYWGSIKHVLRLHCEISLTHMLEILRGAMSGVPLDHIRAWSRVVWLYVEAYDDGLEGYLKDREAKEWHTHR 687
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 238 bits (606), Expect = 1.580e-69 Identity = 162/312 (51.92%), Postives = 175/312 (56.09%), Query Frame = 1
Query: 1 VFELTNGPHQQGVFVFDNSSGHNAYDKDALLAHKINLAPGGEKA-------------------------------------------------------------------------------------------------DKCKADNAASRQAIAAFNKAGEEWERVLKQARRXXXXXXXXXXXXXXXXXXXXXRCCLERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLKILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
FELTNGPH+QGVF+FDNS+GHNAYD DALLAHKI+LAPGGEK +KCKA+NAASRQAIAAFNK GEE ERVL+QAR XXXXXXXXXXXXXXXXXXXXXRCC+ERVFSDL AFKAQLNKVEQIFK+AGHVCIFLPK+HPELNAIE YWGYVKH LR HC +VWLYVEAYD+G+V YLKDRE KEWNTHR
Sbjct: 578 TFELTNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKTALRVFEDDNGRMVHPTFQDGDTLLTDKKIFLPKTPEQKKIKGRKHGTGLDKKQYPVGTKVTHGSPLLGLSKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKAENAASRQAIAAFNKGGEERERVLEQARXXXXXXXXXXXXXXXXXXXXXXRCCMERVFSDLRAFKAQLNKVEQIFKKAGHVCIFLPKYHPELNAIELYWGYVKHYLRLHC---------------------------EVVWLYVEAYDEGMVDYLKDRELKEWNTHR 862
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5JZW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW5_9PHAE) HSP 1 Score: 209 bits (531), Expect = 2.410e-65 Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 1
Query: 304 LERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLK--ILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
+ERVFSDL AFKAQLNKV+QIFK+AGHVCIFLPK+H ELNAIERYWGYVKHVLR HC YSLTHMLK ILP ALSGVPLEHIRAWSR+VWLY+EAYDDG+V YLK+RE KEW+THR
Sbjct: 1 MERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHGELNAIERYWGYVKHVLRLHCEYSLTHMLKXKILPRALSGVPLEHIRAWSRVVWLYIEAYDDGMVGYLKNRELKEWHTHR 116
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE) HSP 1 Score: 198 bits (503), Expect = 8.550e-61 Identity = 93/172 (54.07%), Postives = 117/172 (68.02%), Query Frame = 1
Query: 139 CKADNAASRQAIAAFNKAGEEWERVLK---QARRXXXXXXXXXXXXXXXXXXXXXRCCLERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLKILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
C+A+ AA+RQAI AFN+ GE + V+ Q + RCC+ RV S+L AF+ +LN VE +FK GH+CIFLPK+HPELNAIERYWGY+KH+LR HC YSL HML++LPGALSGVP IRAWSR+ WLY+EAYD+G+ YL+ + KEW HR
Sbjct: 20 CRAEKAATRQAITAFNRGGEGRQHVVDSTGQGKEDGGEDGDSSGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHR 191
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5LC28_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC28_9PHAE) HSP 1 Score: 201 bits (511), Expect = 1.800e-60 Identity = 107/172 (62.21%), Postives = 132/172 (76.74%), Query Frame = 1
Query: 139 CKADNAASRQAIAAFNKAGEEWERVLK---QARRXXXXXXXXXXXXXXXXXXXXXRCCLERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLKILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
C+A+ AA+RQAI AFN+ GE ++V+ Q XXXXXXXXXXXXX RCC+ RV S+L AF+ +LN VE++FK GH+CIFLPK+HPELNAIERYWGY+KH+LR HC YSL HML++LPGALSGVP IRAWSR+ WLY+EAYD+G+ YL+ R+ KEW HR
Sbjct: 54 CRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHR 225
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5KZJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ0_9PHAE) HSP 1 Score: 200 bits (509), Expect = 4.310e-59 Identity = 107/172 (62.21%), Postives = 131/172 (76.16%), Query Frame = 1
Query: 139 CKADNAASRQAIAAFNKAGEEWERVLK---QARRXXXXXXXXXXXXXXXXXXXXXRCCLERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLKILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
C+A+ AA+RQAI AFN GE ++V+ Q XXXXXXXXXXXXX RCC+ RV S+L AF+ +LN VE++FK GH+CIFLPK+HPELNAIERYWGY+KH+LR HC YSL HML++LPGALSGVP IRAWSR+ WLY+EAYD+G+ YL+ R+ KEW HR
Sbjct: 169 CRAEKAATRQAITAFNSGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHR 340
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5KWI8_9PHAE (Uncharacterized protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI8_9PHAE) HSP 1 Score: 196 bits (499), Expect = 6.560e-59 Identity = 105/172 (61.05%), Postives = 130/172 (75.58%), Query Frame = 1
Query: 139 CKADNAASRQAIAAFNKAGEEWERVLK---QARRXXXXXXXXXXXXXXXXXXXXXRCCLERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLKILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
C+A+ AA+RQAI A N+ GE ++V+ Q XXXXXXXXXXXXX RCC+ RV S+L AF+ +LN VE++FK GH+CIFLPK+HPELNAIERYWGY+KH+LR HC YSL HML++LPGALSGVP IR WSR+ WLY+EAYD+G+ YL+ R+ KEW HR
Sbjct: 54 CRAEKAATRQAITASNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRVWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHR 225
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5JR66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR66_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.040e-58 Identity = 93/172 (54.07%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 139 CKADNAASRQAIAAFNKAGEEWERVLK---QARRXXXXXXXXXXXXXXXXXXXXXRCCLERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLKILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
C+AD AA+RQAI AFN+ E ++V+ Q RCC+ RV S+L AF+ +LN VE++FK GH+CIFLPK+HPELNAIERYWGY+K++LR HC YSL HML++LPGALSGVP IRAWSR+ WLY+EAYD+G+ YL+ R+ KEW HR
Sbjct: 117 CRADKAATRQAITAFNRGVEGRQQVVDNKGQGEEDGGEDGASVGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKYLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHR 288
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Match: A0A6H5JDL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL9_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.440e-58 Identity = 105/172 (61.05%), Postives = 130/172 (75.58%), Query Frame = 1
Query: 139 CKADNAASRQAIAAFNKAGEEWERVLK---QARRXXXXXXXXXXXXXXXXXXXXXRCCLERVFSDLTAFKAQLNKVEQIFKEAGHVCIFLPKHHPELNAIERYWGYVKHVLRRHC*YSLTHMLKILPGALSGVPLEHIRAWSRLVWLYVEAYDDGVVHYLKDREFKEWNTHR 645
C+A+ AA+RQAI AFN+ GE ++V+ Q XXXXXXXXXXXX RCC+ RV S+L AF+ +LN VE++FK GH+CIFLPK+HPELNAIERYWGY+KH+LR H YSL HML++LPGALSGVP IRAWSR+ WLY+EAYD+G+ YL+ R+ KEW HR
Sbjct: 95 CRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDGXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHWEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHR 266 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1292.2401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1292.2401.1 >prot_Ecto-sp13_S_contig1292.2401.1 ID=prot_Ecto-sp13_S_contig1292.2401.1|Name=mRNA_Ecto-sp13_S_contig1292.2401.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=159bp VFELTNGPHQQGVFVFDNSSGHNAYDKDALLAHKINLAPGGEKADKCKADback to top mRNA from alignment at Ecto-sp13_S_contig1292:14352..15290- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1292.2401.1 ID=mRNA_Ecto-sp13_S_contig1292.2401.1|Name=mRNA_Ecto-sp13_S_contig1292.2401.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=939bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1292:14352..15290- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1292:14352..15290- >mRNA_Ecto-sp13_S_contig1292.2401.1 ID=mRNA_Ecto-sp13_S_contig1292.2401.1|Name=mRNA_Ecto-sp13_S_contig1292.2401.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=477bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1292:14352..15290- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |