prot_Ecto-sp13_S_contig12908.2393.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12908.2393.1
Unique Nameprot_Ecto-sp13_S_contig12908.2393.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length440
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12908.2393.1 vs. uniprot
Match: A0A6H5KKW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW1_9PHAE)

HSP 1 Score: 706 bits (1822), Expect = 3.690e-254
Identity = 386/438 (88.13%), Postives = 394/438 (89.95%), Query Frame = 0 
Query:    1 METETSQLIKGMDVDIGMGLGDDLGGFEGFDAMFAEPNSTSDFFKFCEIEDTQQQQHQQDMAITNSAFQGPPSPASTFGLQPKVSDFGQESWIPGAQQQVPIQAWPLTTSSEPTQRVNPNMLLPSGGKPRARKRHDEDEALVSKESAFPVMKRRSSTASISMNPSPPPTSSQQEEGLEKSHSFCVTTASAGWAPAVSQHQPGVARHGGSSQPPHEGGTASPPGGAIKVNTNVTSGTVRPPRISVFMSNSGRRGASGSGVVGGGXXXXXAAPAPSPSMMPTAPGSYSSSVLEPTMDRTASAQAHRLKDLRITMRDRSVAEKYVVDHNPAVVAMGSPHHLNSTSALLFGEDDQDDHFTATATMSATEPTAPSLRRASTVGALTIAGSEVMSTSPVLSSSGRIIQSCELSDRVGDCGQRRNLVCRVFGSGGSPFVRPASGG 438
            METE SQLIKGMDVDIGMGLGDDLGGFEGFDAMFAEPNSTSDFFKFCEIEDTQQQQHQQ MAITNSAFQGPPSPAS F  QPKVSDFGQESW+PG QQ +PIQAWP T SSEPTQ VNPN+LLP GGKP+ARKRHDEDEALVSKES FPVMKRRSSTASISMNPSPPPTSSQQ+ GLEKSHSFCVTTASAGWAPAVS  QPGVARH GSSQPP +GG ASPPGGAIKVNTNVTSGTVRPPRISVFMSNSGR            XXXXXAAPAPSPSMMPTAPGSYS  VLEPTMDRTASAQA RLKDLRITMRDRSVAEKYVVDH PAVVAMGSPHHLNSTSALLF EDD   HFTATA+ SA  PT PSLRRASTVGALTIAGSEVMSTSPVLSSSGRIIQSCELSDRVGD GQRRNLVCRVFGSGGSPF+RPAS G
Sbjct:    1 METEPSQLIKGMDVDIGMGLGDDLGGFEGFDAMFAEPNSTSDFFKFCEIEDTQQQQHQQGMAITNSAFQGPPSPASMFAHQPKVSDFGQESWVPGEQQHLPIQAWPPTISSEPTQCVNPNLLLPIGGKPKARKRHDEDEALVSKESVFPVMKRRSSTASISMNPSPPPTSSQQQ-GLEKSHSFCVTTASAGWAPAVSHQQPGVARHVGSSQPPQQGGVASPPGGAIKVNTNVTSGTVRPPRISVFMSNSGRXXXXXXXXXXXXXXXXXAAPAPSPSMMPTAPGSYSGGVLEPTMDRTASAQAQRLKDLRITMRDRSVAEKYVVDHTPAVVAMGSPHHLNSTSALLFSEDD---HFTATASGSAAGPTVPSLRRASTVGALTIAGSEVMSTSPVLSSSGRIIQSCELSDRVGDGGQRRNLVCRVFGSGGSPFMRPASSG 434
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BLAST of mRNA_Ecto-sp13_S_contig12908.2393.1 vs. uniprot
Match: D7G817_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G817_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 8.320e-134
Identity = 216/251 (86.06%), Postives = 220/251 (87.65%), Query Frame = 0 
Query:    1 METETSQLIKGMDVDIGMGLGDDLGGFEGFDAMFAEPNSTSDFFKFCEIEDTQQQQHQQDMAITNSAFQGPPSPASTFGLQPKVSDFGQESWIPGAQQQVPIQAWPLTTSSEPTQRVNPNMLLPSGGKPRARKRHDEDEALVSKESAFPVMKRRSSTASISMNPSPPPTSSQQEEGLEKSHSFCVTTASAGWAPAVSQHQPGVARHGGSSQPPHEGGTASPPGGAIKVNTNVTSGTVRPPRISVFMSNSGR 251
            METE SQLIKGMD+DIGMGLGDDLGGFEGFDAMFAEPNSTSDFFKFCEIEDTQQQ HQQDMAITNSAFQGPPSPASTFG QPKVSDFGQESWIPG QQQ+PIQAWPLTTSSEPTQRVNPN+LLPSGGKPRARKRHDEDEALVSKES FPV+KRRSSTASISMN SPPPTSSQQE GLEKSHSFCVTTASAGWAPAVSQ Q GVA                     IKV TNVTSGTVRPPRISVFMSNSGR
Sbjct:    1 METEPSQLIKGMDMDIGMGLGDDLGGFEGFDAMFAEPNSTSDFFKFCEIEDTQQQHHQQDMAITNSAFQGPPSPASTFGHQPKVSDFGQESWIPGGQQQLPIQAWPLTTSSEPTQRVNPNLLLPSGGKPRARKRHDEDEALVSKESVFPVIKRRSSTASISMNRSPPPTSSQQE-GLEKSHSFCVTTASAGWAPAVSQQQAGVAXXXXXXXXXXXXXXXXXXXXXIKVTTNVTSGTVRPPRISVFMSNSGR 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12908.2393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKW1_9PHAE3.690e-25488.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G817_ECTSI8.320e-13486.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12908contigEcto-sp13_S_contig12908:848..2485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12908.2393.1mRNA_Ecto-sp13_S_contig12908.2393.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12908 275..2485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12908.2393.1 ID=prot_Ecto-sp13_S_contig12908.2393.1|Name=mRNA_Ecto-sp13_S_contig12908.2393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=440bp
METETSQLIKGMDVDIGMGLGDDLGGFEGFDAMFAEPNSTSDFFKFCEIE
DTQQQQHQQDMAITNSAFQGPPSPASTFGLQPKVSDFGQESWIPGAQQQV
PIQAWPLTTSSEPTQRVNPNMLLPSGGKPRARKRHDEDEALVSKESAFPV
MKRRSSTASISMNPSPPPTSSQQEEGLEKSHSFCVTTASAGWAPAVSQHQ
PGVARHGGSSQPPHEGGTASPPGGAIKVNTNVTSGTVRPPRISVFMSNSG
RRGASGSGVVGGGSSQQQAAPAPSPSMMPTAPGSYSSSVLEPTMDRTASA
QAHRLKDLRITMRDRSVAEKYVVDHNPAVVAMGSPHHLNSTSALLFGEDD
QDDHFTATATMSATEPTAPSLRRASTVGALTIAGSEVMSTSPVLSSSGRI
IQSCELSDRVGDCGQRRNLVCRVFGSGGSPFVRPASGGC*
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